Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 SNORD32A-201ENST00000364805 84 ntBASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 RNU6-534P-201ENST00000364877 106 ntBASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 SNORA12-201ENST00000391162 147 ntBASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 RNU6-192P-201ENST00000391253 100 ntBASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 RNU2-32P-201ENST00000411193 191 ntBASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 USP9YP18-201ENST00000425912 695 ntBASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 AC244670.1-201ENST00000436879 112 ntBASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 UBE2V1P8-201ENST00000437166 265 ntBASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 AL359672.1-201ENST00000442302 409 ntBASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 RNU6-1037P-201ENST00000459571 107 ntBASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 RPL9P9-202ENST00000466501 579 ntBASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 HMGB1P35-201ENST00000503360 598 ntBASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 AC011352.1-201ENST00000512300 793 ntBASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 SNORA48.11-201ENST00000517015 89 ntBASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 CYCSP26-201ENST00000534107 320 ntBASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 TRAV32-201ENST00000553993 340 ntBASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 AP000907.4-201ENST00000604143 237 ntBASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 AP001836.1-201ENST00000604675 523 ntBASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 AC090617.10-201ENST00000624308 134 ntBASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
VIPAS39Q9H9C1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 RNU6-1141P-201ENST00000364520 107 ntBASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 RNU6-214P-201ENST00000384130 107 ntBASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 SNORA36A-201ENST00000384221 132 ntBASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 MTND1P4-201ENST00000435196 415 ntBASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 MTND4P23-201ENST00000447723 1363 ntBASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 MTCYBP18-201ENST00000501056 747 ntBASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 MIR449C-201ENST00000516047 92 ntBASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 RNA5SP148-201ENST00000516527 94 ntBASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 RNU2-44P-201ENST00000516795 194 ntBASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 RNU6-612P-201ENST00000516909 102 ntBASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 RNU6-273P-201ENST00000516937 96 ntBASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 AC121333.1-201ENST00000567488 2709 ntBASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 MIR3122-201ENST00000577243 73 ntBASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 VN1R107P-201ENST00000601784 209 ntBASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 AL034555.1-201ENST00000604816 211 ntBASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 U4atac.1-201ENST00000618345 95 ntBASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
VIPAS39Q9H9C1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
VIPAS39Q9H9C1 AC009541.1-201ENST00000438279 2662 ntBASIC2.03□□□□□ -2.08
VIPAS39Q9H9C1 RNU4-15P-201ENST00000362613 141 ntBASIC2.03□□□□□ -2.08
VIPAS39Q9H9C1 Y_RNA.573-201ENST00000384763 105 ntBASIC2.03□□□□□ -2.08
VIPAS39Q9H9C1 AC027124.2-201ENST00000428249 105 ntBASIC2.03□□□□□ -2.08
VIPAS39Q9H9C1 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.03□□□□□ -2.08
VIPAS39Q9H9C1 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.03□□□□□ -2.08
VIPAS39Q9H9C1 AC145146.1-201ENST00000496370 254 ntBASIC2.03□□□□□ -2.08
VIPAS39Q9H9C1 AC082651.2-201ENST00000496833 166 ntBASIC2.03□□□□□ -2.08
VIPAS39Q9H9C1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.03□□□□□ -2.08
VIPAS39Q9H9C1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.03□□□□□ -2.08
VIPAS39Q9H9C1 AC025465.4-201ENST00000513422 638 ntBASIC2.03□□□□□ -2.08
VIPAS39Q9H9C1 RNU6-667P-201ENST00000517186 102 ntBASIC2.03□□□□□ -2.08
VIPAS39Q9H9C1 AC115990.1-201ENST00000526957 301 ntBASIC2.03□□□□□ -2.08
VIPAS39Q9H9C1 AC118273.2-201ENST00000532092 465 ntBASIC2.03□□□□□ -2.08
VIPAS39Q9H9C1 AC026371.1-201ENST00000551867 419 ntBASIC2.03□□□□□ -2.08
VIPAS39Q9H9C1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.03□□□□□ -2.08
VIPAS39Q9H9C1 MIR3126-201ENST00000577443 74 ntBASIC2.03□□□□□ -2.08
VIPAS39Q9H9C1 AC078795.3-201ENST00000602913 472 ntBASIC2.03□□□□□ -2.08
VIPAS39Q9H9C1 CTSLP2-204ENST00000629029 392 ntBASIC2.03□□□□□ -2.08
VIPAS39Q9H9C1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
VIPAS39Q9H9C1 RNU6-234P-201ENST00000365229 104 ntBASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 RNU6-546P-201ENST00000383991 107 ntBASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 SNORA32.2-201ENST00000384049 122 ntBASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 RNU6-325P-201ENST00000411132 105 ntBASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 FCF1P9-201ENST00000412546 282 ntBASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 VN1R36P-201ENST00000414936 291 ntBASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 AL590556.1-201ENST00000423231 483 ntBASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 AL590632.1-201ENST00000424289 371 ntBASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 NDUFA5P4-201ENST00000436704 385 ntBASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 GPM6BP3-201ENST00000442797 145 ntBASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 AC007547.1-201ENST00000462177 490 ntBASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 RNU7-193P-201ENST00000516723 65 ntBASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 AC233702.2-202ENST00000562547 291 ntBASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 MIR5089-201ENST00000580047 84 ntBASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 AL161423.1-201ENST00000613700 262 ntBASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 AC007014.2-201ENST00000615581 479 ntBASIC2.02□□□□□ -2.09
VIPAS39Q9H9C1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
VIPAS39Q9H9C1 SNORD115-3-201ENST00000363100 82 ntBASIC2.01□□□□□ -2.09
VIPAS39Q9H9C1 Y_RNA.111-201ENST00000363248 100 ntBASIC2.01□□□□□ -2.09
VIPAS39Q9H9C1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VIPAS39Q9H9C1 MIR29B2-201ENST00000385055 81 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms