Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.22□□□□□ -2.05
SNX25Q9H3E2 RPL39P5-202ENST00000512505 151 ntBASIC2.22□□□□□ -2.05
SNX25Q9H3E2 HSPE1P18-201ENST00000517602 280 ntBASIC2.22□□□□□ -2.05
SNX25Q9H3E2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.22□□□□□ -2.05
SNX25Q9H3E2 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.22□□□□□ -2.05
SNX25Q9H3E2 MIR4298-201ENST00000584380 73 ntBASIC2.22□□□□□ -2.05
SNX25Q9H3E2 AC080078.2-201ENST00000603766 501 ntBASIC2.22□□□□□ -2.05
SNX25Q9H3E2 AP001836.1-201ENST00000604675 523 ntBASIC2.22□□□□□ -2.05
SNX25Q9H3E2 SNORD14A-201ENST00000606526 91 ntBASIC2.22□□□□□ -2.05
SNX25Q9H3E2 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SNX25Q9H3E2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
SNX25Q9H3E2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SNX25Q9H3E2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
SNX25Q9H3E2 snoU2_19.1-201ENST00000362361 80 ntBASIC2.21□□□□□ -2.06
SNX25Q9H3E2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SNX25Q9H3E2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SNX25Q9H3E2 MIR450B-201ENST00000401182 78 ntBASIC2.21□□□□□ -2.06
SNX25Q9H3E2 AL355497.1-201ENST00000406262 551 ntBASIC2.21□□□□□ -2.06
SNX25Q9H3E2 RNU2-48P-201ENST00000410694 191 ntBASIC2.21□□□□□ -2.06
SNX25Q9H3E2 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
SNX25Q9H3E2 MTND1P4-201ENST00000435196 415 ntBASIC2.21□□□□□ -2.06
SNX25Q9H3E2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.21□□□□□ -2.06
SNX25Q9H3E2 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.21□□□□□ -2.06
SNX25Q9H3E2 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.21□□□□□ -2.06
SNX25Q9H3E2 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.21□□□□□ -2.06
SNX25Q9H3E2 AL139109.1-201ENST00000455491 297 ntBASIC2.21□□□□□ -2.06
SNX25Q9H3E2 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.21□□□□□ -2.06
SNX25Q9H3E2 RNU7-66P-201ENST00000459469 62 ntBASIC2.21□□□□□ -2.06
SNX25Q9H3E2 AC091874.1-201ENST00000511402 339 ntBASIC2.21□□□□□ -2.06
SNX25Q9H3E2 AC104576.1-201ENST00000524225 88 ntBASIC2.21□□□□□ -2.06
SNX25Q9H3E2 CYCSP26-201ENST00000534107 320 ntBASIC2.21□□□□□ -2.06
SNX25Q9H3E2 MIR4448-201ENST00000584360 86 ntBASIC2.21□□□□□ -2.06
SNX25Q9H3E2 ELOCP5-201ENST00000604924 333 ntBASIC2.21□□□□□ -2.06
SNX25Q9H3E2 AL670379.2-201ENST00000604983 252 ntBASIC2.21□□□□□ -2.06
SNX25Q9H3E2 AL356157.2-201ENST00000605122 111 ntBASIC2.21□□□□□ -2.06
SNX25Q9H3E2 AC068944.2-201ENST00000610373 403 ntBASIC2.21□□□□□ -2.06
SNX25Q9H3E2 AC008121.3-201ENST00000618726 433 ntBASIC2.21□□□□□ -2.06
SNX25Q9H3E2 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.21□□□□□ -2.06
SNX25Q9H3E2 AL450472.1-202ENST00000637286 180 ntBASIC2.21□□□□□ -2.06
SNX25Q9H3E2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.21□□□□□ -2.06
SNX25Q9H3E2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
SNX25Q9H3E2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
SNX25Q9H3E2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
SNX25Q9H3E2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SNX25Q9H3E2 RNU6-944P-201ENST00000364023 107 ntBASIC2.2□□□□□ -2.06
SNX25Q9H3E2 MIR561-201ENST00000385216 97 ntBASIC2.2□□□□□ -2.06
SNX25Q9H3E2 MIR1261-201ENST00000408659 82 ntBASIC2.2□□□□□ -2.06
SNX25Q9H3E2 NDUFA5P4-201ENST00000436704 385 ntBASIC2.2□□□□□ -2.06
SNX25Q9H3E2 AC124916.1-201ENST00000444020 547 ntBASIC2.2□□□□□ -2.06
SNX25Q9H3E2 IFNA11P-201ENST00000446352 526 ntBASIC2.2□□□□□ -2.06
SNX25Q9H3E2 RNU6-1037P-201ENST00000459571 107 ntBASIC2.2□□□□□ -2.06
SNX25Q9H3E2 HMGB1P35-201ENST00000503360 598 ntBASIC2.2□□□□□ -2.06
SNX25Q9H3E2 FAM206BP-201ENST00000510179 541 ntBASIC2.2□□□□□ -2.06
SNX25Q9H3E2 RNU6-718P-201ENST00000516166 105 ntBASIC2.2□□□□□ -2.06
SNX25Q9H3E2 MIR514B-201ENST00000516774 80 ntBASIC2.2□□□□□ -2.06
SNX25Q9H3E2 RN7SKP256-201ENST00000517201 314 ntBASIC2.2□□□□□ -2.06
SNX25Q9H3E2 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.2□□□□□ -2.06
SNX25Q9H3E2 AC115990.1-201ENST00000526957 301 ntBASIC2.2□□□□□ -2.06
SNX25Q9H3E2 AP000763.2-201ENST00000540641 163 ntBASIC2.2□□□□□ -2.06
SNX25Q9H3E2 TRAV32-201ENST00000553993 340 ntBASIC2.2□□□□□ -2.06
SNX25Q9H3E2 AC100830.2-201ENST00000581636 240 ntBASIC2.2□□□□□ -2.06
SNX25Q9H3E2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SNX25Q9H3E2 AC116312.1-201ENST00000606841 314 ntBASIC2.2□□□□□ -2.06
SNX25Q9H3E2 Y_RNA.783-201ENST00000613546 102 ntBASIC2.2□□□□□ -2.06
SNX25Q9H3E2 AP000553.5-201ENST00000641933 54 ntBASIC2.2□□□□□ -2.06
SNX25Q9H3E2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
SNX25Q9H3E2 KPNA2P1-201ENST00000458289 1591 ntBASIC2.19□□□□□ -2.06
SNX25Q9H3E2 SNORA3A-201ENST00000364113 130 ntBASIC2.19□□□□□ -2.06
SNX25Q9H3E2 Y_RNA.295-201ENST00000364918 102 ntBASIC2.19□□□□□ -2.06
SNX25Q9H3E2 SNORA25B-201ENST00000365507 128 ntBASIC2.19□□□□□ -2.06
SNX25Q9H3E2 Y_RNA.453-201ENST00000384223 109 ntBASIC2.19□□□□□ -2.06
SNX25Q9H3E2 RN7SKP61-201ENST00000410642 295 ntBASIC2.19□□□□□ -2.06
SNX25Q9H3E2 AP000275.1-201ENST00000411943 390 ntBASIC2.19□□□□□ -2.06
SNX25Q9H3E2 AL445646.1-201ENST00000431784 216 ntBASIC2.19□□□□□ -2.06
SNX25Q9H3E2 AL133396.1-201ENST00000432048 687 ntBASIC2.19□□□□□ -2.06
SNX25Q9H3E2 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.19□□□□□ -2.06
SNX25Q9H3E2 RPS15AP10-201ENST00000432472 382 ntBASIC2.19□□□□□ -2.06
SNX25Q9H3E2 AC244670.1-201ENST00000436879 112 ntBASIC2.19□□□□□ -2.06
SNX25Q9H3E2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SNX25Q9H3E2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.19□□□□□ -2.06
SNX25Q9H3E2 RPS29P27-201ENST00000463711 170 ntBASIC2.19□□□□□ -2.06
SNX25Q9H3E2 AC092989.1-201ENST00000481235 277 ntBASIC2.19□□□□□ -2.06
SNX25Q9H3E2 MTCYBP18-201ENST00000501056 747 ntBASIC2.19□□□□□ -2.06
SNX25Q9H3E2 RNU6-1332P-201ENST00000516666 104 ntBASIC2.19□□□□□ -2.06
SNX25Q9H3E2 IGKV3-31-201ENST00000523109 329 ntBASIC2.19□□□□□ -2.06
SNX25Q9H3E2 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.19□□□□□ -2.06
SNX25Q9H3E2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.19□□□□□ -2.06
SNX25Q9H3E2 AC018889.1-201ENST00000605372 397 ntBASIC2.19□□□□□ -2.06
SNX25Q9H3E2 MTND4P23-201ENST00000447723 1363 ntBASIC2.19□□□□□ -2.06
SNX25Q9H3E2 AP000560.1-201ENST00000624150 1937 ntBASIC2.19□□□□□ -2.06
SNX25Q9H3E2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.18□□□□□ -2.06
SNX25Q9H3E2 AC092881.1-201ENST00000638218 2733 ntBASIC2.18□□□□□ -2.06
SNX25Q9H3E2 RNU4-15P-201ENST00000362613 141 ntBASIC2.18□□□□□ -2.06
SNX25Q9H3E2 Y_RNA.505-201ENST00000384489 102 ntBASIC2.18□□□□□ -2.06
SNX25Q9H3E2 SNORA26.3-201ENST00000391119 136 ntBASIC2.18□□□□□ -2.06
SNX25Q9H3E2 AC078809.1-201ENST00000427601 140 ntBASIC2.18□□□□□ -2.06
SNX25Q9H3E2 AC027124.2-201ENST00000428249 105 ntBASIC2.18□□□□□ -2.06
SNX25Q9H3E2 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.18□□□□□ -2.06
SNX25Q9H3E2 AC009238.1-201ENST00000442165 424 ntBASIC2.18□□□□□ -2.06
SNX25Q9H3E2 AC009237.6-201ENST00000446969 424 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 190.1 ms