Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RNA5SP322-201ENST00000363617 119 ntBASIC4.44□□□□□ -1.7
NUCKS1Q9H1E3 RNU6-324P-201ENST00000363957 106 ntBASIC4.44□□□□□ -1.7
NUCKS1Q9H1E3 Y_RNA.293-201ENST00000364908 93 ntBASIC4.44□□□□□ -1.7
NUCKS1Q9H1E3 MIR549A-201ENST00000385268 96 ntBASIC4.44□□□□□ -1.7
NUCKS1Q9H1E3 AL590383.1-201ENST00000428602 75 ntBASIC4.44□□□□□ -1.7
NUCKS1Q9H1E3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.44□□□□□ -1.7
NUCKS1Q9H1E3 AL356535.1-201ENST00000440335 398 ntBASIC4.44□□□□□ -1.7
NUCKS1Q9H1E3 RPL29P14-201ENST00000495837 428 ntBASIC4.44□□□□□ -1.7
NUCKS1Q9H1E3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.44□□□□□ -1.7
NUCKS1Q9H1E3 AP004242.1-201ENST00000533701 349 ntBASIC4.44□□□□□ -1.7
NUCKS1Q9H1E3 AC090049.2-201ENST00000550377 109 ntBASIC4.44□□□□□ -1.7
NUCKS1Q9H1E3 GNRHR2P1-201ENST00000555315 631 ntBASIC4.44□□□□□ -1.7
NUCKS1Q9H1E3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.44□□□□□ -1.7
NUCKS1Q9H1E3 AC006380.1-201ENST00000603598 186 ntBASIC4.44□□□□□ -1.7
NUCKS1Q9H1E3 AL359198.2-201ENST00000611836 194 ntBASIC4.44□□□□□ -1.7
NUCKS1Q9H1E3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 AC010329.5-201ENST00000623497 2174 ntBASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 MIR383-201ENST00000362257 73 ntBASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 Y_RNA.24-201ENST00000362508 103 ntBASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 RNU6-1180P-201ENST00000364935 107 ntBASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 MIR616-201ENST00000385293 97 ntBASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 MIR1251-201ENST00000408552 70 ntBASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 RNA5SP89-201ENST00000410300 108 ntBASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 RNA5SP475-201ENST00000410568 110 ntBASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 AL162151.2-201ENST00000448875 158 ntBASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 AC146507.2-201ENST00000460608 476 ntBASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 RPL23AP62-201ENST00000463396 453 ntBASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 NACAP3-201ENST00000552100 481 ntBASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 PARP1P2-201ENST00000556806 195 ntBASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 TVP23BP1-201ENST00000557500 617 ntBASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 MTND5P34-201ENST00000568888 325 ntBASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NUCKS1Q9H1E3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 IPO8P1-201ENST00000455509 3109 ntBASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 ZNF702P-202ENST00000434269 1966 ntBASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 AC092268.1-201ENST00000342691 405 ntBASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 SNORA60-201ENST00000362396 134 ntBASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 RNU6-799P-201ENST00000363567 107 ntBASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 RNY1P11-201ENST00000363759 113 ntBASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 RNU6-643P-201ENST00000384018 107 ntBASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 BPY2DP-201ENST00000422208 265 ntBASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 AC012306.1-201ENST00000423267 114 ntBASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 AC078809.1-201ENST00000427601 140 ntBASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 AL121914.1-201ENST00000450188 156 ntBASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 AC010285.1-201ENST00000470580 392 ntBASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 AC099522.1-202ENST00000514718 367 ntBASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 RNU5E-3P-201ENST00000515913 68 ntBASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 SNORA70.16-201ENST00000516390 95 ntBASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 AP003730.1-201ENST00000524605 285 ntBASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 CR383656.8-201ENST00000549046 145 ntBASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 AC022655.2-201ENST00000577280 318 ntBASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 MIR3646-201ENST00000578301 84 ntBASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 Z82217.1-201ENST00000625157 8149 ntBASIC4.42□□□□□ -1.7
NUCKS1Q9H1E3 AC118273.1-201ENST00000525324 3006 ntBASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 RNU6-727P-201ENST00000363592 107 ntBASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 Y_RNA.287-201ENST00000364853 94 ntBASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 RNU1-100P-201ENST00000365255 165 ntBASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 U1.1-201ENST00000384101 164 ntBASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 RNU1-89P-201ENST00000384592 164 ntBASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 RNU6-768P-201ENST00000384683 107 ntBASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 AC006011.1-201ENST00000442758 349 ntBASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 MTATP6P7-201ENST00000453315 681 ntBASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 AC245047.8-201ENST00000456455 284 ntBASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 AC007215.1-201ENST00000464893 276 ntBASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 SNORA31.9-201ENST00000516429 84 ntBASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 RNU1-103P-201ENST00000516502 125 ntBASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 RNU6-844P-201ENST00000517175 102 ntBASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 MRPL49P2-201ENST00000521066 465 ntBASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 MIR5047-201ENST00000579212 100 ntBASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 U7.8-201ENST00000619968 63 ntBASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 MIR6844-201ENST00000637122 62 ntBASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.41□□□□□ -1.7
NUCKS1Q9H1E3 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.4□□□□□ -1.7
NUCKS1Q9H1E3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
NUCKS1Q9H1E3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
NUCKS1Q9H1E3 RNU6-1048P-201ENST00000364054 107 ntBASIC4.4□□□□□ -1.71
NUCKS1Q9H1E3 RNU6-454P-201ENST00000364292 107 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms