Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 SNORA31.6-201ENST00000516241 130 ntBASIC3.65□□□□□ -1.83
CCDC113Q9H0I3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.65□□□□□ -1.83
CCDC113Q9H0I3 AC011471.1-201ENST00000585766 187 ntBASIC3.65□□□□□ -1.83
CCDC113Q9H0I3 YPEL5P2-201ENST00000605553 359 ntBASIC3.65□□□□□ -1.83
CCDC113Q9H0I3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC113Q9H0I3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC113Q9H0I3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CCDC113Q9H0I3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC113Q9H0I3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 GABRG2-229ENST00000641017 3628 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 RNU6-1309P-201ENST00000363305 108 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 RNU6-1210P-201ENST00000363775 107 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 RNU4-50P-201ENST00000364361 141 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 Y_RNA.319-201ENST00000365138 92 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 Y_RNA.333-201ENST00000365274 102 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 AC126124.2-201ENST00000413542 321 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 BX510359.1-201ENST00000456973 237 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 snoU13.14-201ENST00000459372 104 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 SCARNA17.1-201ENST00000516211 143 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 RNU2-53P-201ENST00000516257 147 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 SCARNA17.2-201ENST00000516334 143 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 MIR2276-201ENST00000516886 89 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 AC022868.1-201ENST00000517767 391 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 AC008269.2-201ENST00000561915 1105 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 CYP4A27P-201ENST00000567218 190 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 AL078605.1-201ENST00000603529 500 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 AL162713.1-201ENST00000604480 262 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 AL034555.1-201ENST00000604816 211 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 SCARNA17.4-201ENST00000614296 143 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 AC008121.3-201ENST00000618726 433 ntBASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC113Q9H0I3 AC103988.1-201ENST00000566382 2177 ntBASIC3.63□□□□□ -1.83
CCDC113Q9H0I3 AC017071.1-201ENST00000564407 2204 ntBASIC3.63□□□□□ -1.83
CCDC113Q9H0I3 AC073346.2-201ENST00000624724 2058 ntBASIC3.63□□□□□ -1.83
CCDC113Q9H0I3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC113Q9H0I3 Y_RNA.40-201ENST00000362645 93 ntBASIC3.63□□□□□ -1.83
CCDC113Q9H0I3 RNU6-1093P-201ENST00000391194 107 ntBASIC3.63□□□□□ -1.83
CCDC113Q9H0I3 MIR208B-201ENST00000401172 77 ntBASIC3.63□□□□□ -1.83
CCDC113Q9H0I3 AL357075.1-201ENST00000404107 726 ntBASIC3.63□□□□□ -1.83
CCDC113Q9H0I3 RNA5SP229-201ENST00000410809 99 ntBASIC3.63□□□□□ -1.83
CCDC113Q9H0I3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC113Q9H0I3 RPL23AP67-201ENST00000465341 474 ntBASIC3.63□□□□□ -1.83
CCDC113Q9H0I3 MTATP8P1-201ENST00000467115 207 ntBASIC3.63□□□□□ -1.83
CCDC113Q9H0I3 RN7SL807P-201ENST00000470923 297 ntBASIC3.63□□□□□ -1.83
CCDC113Q9H0I3 RN7SL442P-201ENST00000473804 320 ntBASIC3.63□□□□□ -1.83
CCDC113Q9H0I3 AC107934.2-201ENST00000518653 310 ntBASIC3.63□□□□□ -1.83
CCDC113Q9H0I3 AC103810.1-201ENST00000579873 453 ntBASIC3.63□□□□□ -1.83
CCDC113Q9H0I3 AL161756.2-201ENST00000604597 246 ntBASIC3.63□□□□□ -1.83
CCDC113Q9H0I3 AL670379.2-201ENST00000604983 252 ntBASIC3.63□□□□□ -1.83
CCDC113Q9H0I3 AC073657.2-201ENST00000605661 303 ntBASIC3.63□□□□□ -1.83
CCDC113Q9H0I3 MIR3651-201ENST00000630427 90 ntBASIC3.63□□□□□ -1.83
CCDC113Q9H0I3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC113Q9H0I3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 RNU6-222P-201ENST00000362438 107 ntBASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 SNORA9-201ENST00000384215 133 ntBASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 RNU6-1105P-201ENST00000384774 107 ntBASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 RPL21P75-201ENST00000396599 483 ntBASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 RPL21P28-201ENST00000401418 483 ntBASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 AL590556.1-201ENST00000423231 483 ntBASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 RPL21P39-201ENST00000463605 483 ntBASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 RPL27AP5-201ENST00000469428 449 ntBASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 AP000870.1-201ENST00000472927 406 ntBASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 AC087190.1-201ENST00000484462 480 ntBASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 AC107032.1-201ENST00000485945 480 ntBASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 AC132942.1-201ENST00000486753 483 ntBASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 AC093591.1-201ENST00000491435 481 ntBASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 RPL21P16-201ENST00000495531 483 ntBASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 SCARNA11.3-201ENST00000517276 130 ntBASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 AL390123.1-201ENST00000603216 237 ntBASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 AC099654.7-201ENST00000635788 2127 ntBASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC113Q9H0I3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.61□□□□□ -1.83
CCDC113Q9H0I3 RNU1-75P-201ENST00000347264 129 ntBASIC3.61□□□□□ -1.83
CCDC113Q9H0I3 RNU6-486P-201ENST00000363116 107 ntBASIC3.61□□□□□ -1.83
CCDC113Q9H0I3 RNU6-137P-201ENST00000363680 108 ntBASIC3.61□□□□□ -1.83
CCDC113Q9H0I3 RNU6-879P-201ENST00000364328 108 ntBASIC3.61□□□□□ -1.83
CCDC113Q9H0I3 SNORA63.7-201ENST00000365579 123 ntBASIC3.61□□□□□ -1.83
CCDC113Q9H0I3 MIR1252-201ENST00000408861 65 ntBASIC3.61□□□□□ -1.83
CCDC113Q9H0I3 AL356968.1-201ENST00000416622 474 ntBASIC3.61□□□□□ -1.83
CCDC113Q9H0I3 AL358176.2-201ENST00000425769 204 ntBASIC3.61□□□□□ -1.83
CCDC113Q9H0I3 WARS2P1-201ENST00000429678 537 ntBASIC3.61□□□□□ -1.83
CCDC113Q9H0I3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.61□□□□□ -1.83
CCDC113Q9H0I3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.61□□□□□ -1.83
CCDC113Q9H0I3 AL121594.1-201ENST00000475906 575 ntBASIC3.61□□□□□ -1.83
CCDC113Q9H0I3 AC006483.1-201ENST00000487308 313 ntBASIC3.61□□□□□ -1.83
CCDC113Q9H0I3 SEM1P1-201ENST00000506694 209 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms