Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 MTATP6P7-201ENST00000453315 681 ntBASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 snoU109.2-201ENST00000459316 135 ntBASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 RPL23AP49-201ENST00000492925 468 ntBASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 RNA5SP356-201ENST00000515972 94 ntBASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 AC107934.2-201ENST00000518653 310 ntBASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 NDUFB9P3-201ENST00000521269 501 ntBASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 MIR3162-201ENST00000581818 82 ntBASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 uc_338.1-201ENST00000612113 180 ntBASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 U6.99-201ENST00000637524 83 ntBASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CNTNAP4Q9C0A0 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.05□□□□□ -1.76
CNTNAP4Q9C0A0 RNU6-858P-201ENST00000362436 107 ntBASIC4.05□□□□□ -1.76
CNTNAP4Q9C0A0 MIR708-201ENST00000390708 88 ntBASIC4.05□□□□□ -1.76
CNTNAP4Q9C0A0 RNA5SP213-201ENST00000391031 106 ntBASIC4.05□□□□□ -1.76
CNTNAP4Q9C0A0 RN7SKP220-201ENST00000410611 288 ntBASIC4.05□□□□□ -1.76
CNTNAP4Q9C0A0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.05□□□□□ -1.76
CNTNAP4Q9C0A0 AC005002.2-201ENST00000438228 269 ntBASIC4.05□□□□□ -1.76
CNTNAP4Q9C0A0 AL049830.2-201ENST00000480072 201 ntBASIC4.05□□□□□ -1.76
CNTNAP4Q9C0A0 RPL30P1-201ENST00000488676 339 ntBASIC4.05□□□□□ -1.76
CNTNAP4Q9C0A0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.05□□□□□ -1.76
CNTNAP4Q9C0A0 RN7SKP49-201ENST00000516675 260 ntBASIC4.05□□□□□ -1.76
CNTNAP4Q9C0A0 RN7SKP272-201ENST00000516988 232 ntBASIC4.05□□□□□ -1.76
CNTNAP4Q9C0A0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.05□□□□□ -1.76
CNTNAP4Q9C0A0 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.05□□□□□ -1.76
CNTNAP4Q9C0A0 MIR3144-201ENST00000579460 79 ntBASIC4.05□□□□□ -1.76
CNTNAP4Q9C0A0 MIR4423-201ENST00000580922 80 ntBASIC4.05□□□□□ -1.76
CNTNAP4Q9C0A0 MIR4282-201ENST00000583613 67 ntBASIC4.05□□□□□ -1.76
CNTNAP4Q9C0A0 uc_338.25-201ENST00000613756 156 ntBASIC4.05□□□□□ -1.76
CNTNAP4Q9C0A0 uc_338.32-201ENST00000615087 172 ntBASIC4.05□□□□□ -1.76
CNTNAP4Q9C0A0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 RNU6-1020P-201ENST00000363684 107 ntBASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 Y_RNA.292-201ENST00000364904 97 ntBASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 Y_RNA.383-201ENST00000383855 97 ntBASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 Y_RNA.398-201ENST00000383952 99 ntBASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 RNU6-102P-201ENST00000384485 104 ntBASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 RNU6-394P-201ENST00000410735 107 ntBASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 RPL23AP82-202ENST00000427528 469 ntBASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 CENPBD1P1-201ENST00000464061 469 ntBASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 AC091021.1-201ENST00000468051 388 ntBASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 RNU6-1282P-201ENST00000516735 96 ntBASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 AC013412.1-201ENST00000610687 192 ntBASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 U6.106-201ENST00000636360 105 ntBASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 AC241585.2-209ENST00000638217 143 ntBASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.04□□□□□ -1.76
CNTNAP4Q9C0A0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 AC022336.2-201ENST00000568966 2538 ntBASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 Y_RNA.8-201ENST00000362353 102 ntBASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 RNA5SP502-201ENST00000362694 119 ntBASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 RNU6-879P-201ENST00000364328 108 ntBASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 Y_RNA.230-201ENST00000364348 109 ntBASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 RNU6-318P-201ENST00000384283 103 ntBASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 SNORD20-201ENST00000384550 80 ntBASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 RNU6-959P-201ENST00000384671 107 ntBASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 Y_RNA.569-201ENST00000384749 103 ntBASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 MIR32-201ENST00000384965 70 ntBASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 AC091826.1-201ENST00000514065 313 ntBASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 ZNF192P1-203ENST00000565888 810 ntBASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 MIR3945-201ENST00000581853 98 ntBASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 AL078605.1-201ENST00000603529 500 ntBASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 AC104465.1-201ENST00000611365 139 ntBASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 AC011476.5-201ENST00000615594 130 ntBASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 AC024581.2-201ENST00000619986 252 ntBASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CNTNAP4Q9C0A0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.03□□□□□ -1.77
CNTNAP4Q9C0A0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms