Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AL159153.1-201ENST00000619688 317 ntBASIC2.7□□□□□ -1.98
NPAS1Q99742 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
NPAS1Q99742 AL355596.1-201ENST00000565399 3996 ntBASIC2.7□□□□□ -1.98
NPAS1Q99742 AC080128.1-201ENST00000474389 1917 ntBASIC2.7□□□□□ -1.98
NPAS1Q99742 AP000560.1-201ENST00000624150 1937 ntBASIC2.7□□□□□ -1.98
NPAS1Q99742 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NPAS1Q99742 AC026241.1-201ENST00000517873 2142 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 RNU6-490P-201ENST00000362985 107 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 RNU6-595P-201ENST00000363944 107 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 SNORD56.5-201ENST00000364281 72 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 RNU6-99P-201ENST00000364721 107 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 RNU6-1011P-201ENST00000384668 107 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 MIR32-201ENST00000384965 70 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 CYCSP48-201ENST00000417124 323 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 AC007098.1-201ENST00000420122 367 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 AC008267.5-201ENST00000424928 265 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 RPL30P4-201ENST00000429309 333 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 RPL23AP83-201ENST00000434984 473 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.69□□□□□ -1.98
NPAS1Q99742 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.69□□□□□ -1.98
NPAS1Q99742 UBBP3-201ENST00000445497 241 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 Z96811.1-201ENST00000445880 108 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 AC079354.2-201ENST00000453523 154 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 RNU7-152P-201ENST00000458982 64 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.69□□□□□ -1.98
NPAS1Q99742 AC087477.1-201ENST00000465747 340 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 S100A11P2-201ENST00000467589 312 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 RPL23AP75-201ENST00000491601 451 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.69□□□□□ -1.98
NPAS1Q99742 HMGB1P35-201ENST00000503360 598 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.69□□□□□ -1.98
NPAS1Q99742 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.69□□□□□ -1.98
NPAS1Q99742 MIR3117-201ENST00000584034 78 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 AL034555.1-201ENST00000604816 211 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 AC005000.2-201ENST00000605468 310 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 AL080274.1-201ENST00000605565 220 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 AC005014.2-201ENST00000607795 599 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 SNORA43.4-201ENST00000629559 138 ntBASIC2.69□□□□□ -1.98
NPAS1Q99742 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NPAS1Q99742 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NPAS1Q99742 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NPAS1Q99742 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
NPAS1Q99742 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NPAS1Q99742 Y_RNA.197-201ENST00000364004 102 ntBASIC2.68□□□□□ -1.98
NPAS1Q99742 RNU6-1180P-201ENST00000364935 107 ntBASIC2.68□□□□□ -1.98
NPAS1Q99742 Y_RNA.314-201ENST00000365114 102 ntBASIC2.68□□□□□ -1.98
NPAS1Q99742 Y_RNA.445-201ENST00000384168 102 ntBASIC2.68□□□□□ -1.98
NPAS1Q99742 SNORA44-201ENST00000384584 132 ntBASIC2.68□□□□□ -1.98
NPAS1Q99742 RNU6-541P-201ENST00000384709 110 ntBASIC2.68□□□□□ -1.98
NPAS1Q99742 AL138885.1-201ENST00000405921 675 ntBASIC2.68□□□□□ -1.98
NPAS1Q99742 AC012306.1-201ENST00000423267 114 ntBASIC2.68□□□□□ -1.98
NPAS1Q99742 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.68□□□□□ -1.98
NPAS1Q99742 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.68□□□□□ -1.98
NPAS1Q99742 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.68□□□□□ -1.98
NPAS1Q99742 snoU13.6-201ENST00000458785 104 ntBASIC2.68□□□□□ -1.98
NPAS1Q99742 snoU13.30-201ENST00000458951 104 ntBASIC2.68□□□□□ -1.98
NPAS1Q99742 RNU7-87P-201ENST00000459343 62 ntBASIC2.68□□□□□ -1.98
NPAS1Q99742 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.68□□□□□ -1.98
NPAS1Q99742 Y_RNA.706-201ENST00000516933 99 ntBASIC2.68□□□□□ -1.98
NPAS1Q99742 AC044792.1-201ENST00000593294 196 ntBASIC2.68□□□□□ -1.98
NPAS1Q99742 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.68□□□□□ -1.98
NPAS1Q99742 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NPAS1Q99742 MTND4P27-201ENST00000450813 1354 ntBASIC2.68□□□□□ -1.98
NPAS1Q99742 AC138915.1-201ENST00000565427 1685 ntBASIC2.68□□□□□ -1.98
NPAS1Q99742 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NPAS1Q99742 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NPAS1Q99742 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
NPAS1Q99742 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
NPAS1Q99742 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.67□□□□□ -1.98
NPAS1Q99742 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NPAS1Q99742 Y_RNA.405-201ENST00000383979 100 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 Y_RNA.428-201ENST00000384078 102 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 Y_RNA.451-201ENST00000384200 100 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 Y_RNA.524-201ENST00000384564 100 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 Y_RNA.561-201ENST00000384694 100 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 RNU6-1093P-201ENST00000391194 107 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 MIR208B-201ENST00000401172 77 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 CBX3P9-201ENST00000402326 552 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 SNORD88.1-201ENST00000408684 91 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 RPL19P1-201ENST00000411635 428 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 AC243428.1-201ENST00000421099 264 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.67□□□□□ -1.98
NPAS1Q99742 MTCYBP10-201ENST00000424905 650 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 AIMP1P2-201ENST00000425294 312 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 RPS15AP7-201ENST00000439294 405 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 AC007677.1-201ENST00000445757 515 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.67□□□□□ -1.98
NPAS1Q99742 snoU13.14-201ENST00000459372 104 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 TOMM22P6-201ENST00000465035 409 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 RPS27AP9-201ENST00000477681 438 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 AP004217.1-201ENST00000480579 346 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 RN7SL633P-201ENST00000488974 297 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.67□□□□□ -1.98
NPAS1Q99742 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.67□□□□□ -1.98
NPAS1Q99742 RNU6-699P-201ENST00000517081 110 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 HSPE1P18-201ENST00000517602 280 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.67□□□□□ -1.98
NPAS1Q99742 AC016256.1-201ENST00000547971 354 ntBASIC2.67□□□□□ -1.98
NPAS1Q99742 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms