Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 Y_RNA.478-201ENST00000384358 107 ntBASIC3□□□□□ -1.93
TIMP4Q99727 RNY3P4-201ENST00000384428 101 ntBASIC3□□□□□ -1.93
TIMP4Q99727 AL079342.1-201ENST00000401460 267 ntBASIC3□□□□□ -1.93
TIMP4Q99727 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3□□□□□ -1.93
TIMP4Q99727 AC245291.1-201ENST00000419501 328 ntBASIC3□□□□□ -1.93
TIMP4Q99727 YPEL5P1-201ENST00000419731 367 ntBASIC3□□□□□ -1.93
TIMP4Q99727 AC006028.1-201ENST00000438379 402 ntBASIC3□□□□□ -1.93
TIMP4Q99727 AL139109.1-201ENST00000455491 297 ntBASIC3□□□□□ -1.93
TIMP4Q99727 RPS27P29-201ENST00000463110 252 ntBASIC3□□□□□ -1.93
TIMP4Q99727 RPS29P20-201ENST00000489592 171 ntBASIC3□□□□□ -1.93
TIMP4Q99727 RNU6-138P-201ENST00000515952 107 ntBASIC3□□□□□ -1.93
TIMP4Q99727 MIR2355-201ENST00000517199 87 ntBASIC3□□□□□ -1.93
TIMP4Q99727 AC093331.1-201ENST00000521474 169 ntBASIC3□□□□□ -1.93
TIMP4Q99727 MIR5680-201ENST00000577577 84 ntBASIC3□□□□□ -1.93
TIMP4Q99727 MIR4659A-201ENST00000580269 81 ntBASIC3□□□□□ -1.93
TIMP4Q99727 MIR4300-201ENST00000581016 96 ntBASIC3□□□□□ -1.93
TIMP4Q99727 AC073657.2-201ENST00000605661 303 ntBASIC3□□□□□ -1.93
TIMP4Q99727 AC240442.1-201ENST00000616055 283 ntBASIC3□□□□□ -1.93
TIMP4Q99727 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
TIMP4Q99727 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3□□□□□ -1.93
TIMP4Q99727 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3□□□□□ -1.93
TIMP4Q99727 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3□□□□□ -1.93
TIMP4Q99727 AC017071.1-201ENST00000564407 2204 ntBASIC3□□□□□ -1.93
TIMP4Q99727 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3□□□□□ -1.93
TIMP4Q99727 PWAR6-201ENST00000552334 4618 ntBASIC2.99□□□□□ -1.93
TIMP4Q99727 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TIMP4Q99727 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
TIMP4Q99727 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
TIMP4Q99727 FAM35BP-202ENST00000497389 3337 ntBASIC2.99□□□□□ -1.93
TIMP4Q99727 Y_RNA.16-201ENST00000362421 102 ntBASIC2.99□□□□□ -1.93
TIMP4Q99727 RNU6-879P-201ENST00000364328 108 ntBASIC2.99□□□□□ -1.93
TIMP4Q99727 RNU6-937P-201ENST00000384325 106 ntBASIC2.99□□□□□ -1.93
TIMP4Q99727 RNU6-843P-201ENST00000384454 104 ntBASIC2.99□□□□□ -1.93
TIMP4Q99727 UBA52P6-201ENST00000399822 382 ntBASIC2.99□□□□□ -1.93
TIMP4Q99727 MIR548H3-201ENST00000408771 118 ntBASIC2.99□□□□□ -1.93
TIMP4Q99727 RNU2-64P-201ENST00000411315 191 ntBASIC2.99□□□□□ -1.93
TIMP4Q99727 RPL26P27-201ENST00000414397 437 ntBASIC2.99□□□□□ -1.93
TIMP4Q99727 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.99□□□□□ -1.93
TIMP4Q99727 HMGN2P20-201ENST00000437531 273 ntBASIC2.99□□□□□ -1.93
TIMP4Q99727 AC004383.1-201ENST00000438135 289 ntBASIC2.99□□□□□ -1.93
TIMP4Q99727 SUMO1P3-201ENST00000439961 304 ntBASIC2.99□□□□□ -1.93
TIMP4Q99727 Z75741.1-201ENST00000446793 314 ntBASIC2.99□□□□□ -1.93
TIMP4Q99727 RPS26P21-201ENST00000475397 348 ntBASIC2.99□□□□□ -1.93
TIMP4Q99727 RNU1-61P-201ENST00000516107 151 ntBASIC2.99□□□□□ -1.93
TIMP4Q99727 SCARNA24.2-201ENST00000516968 130 ntBASIC2.99□□□□□ -1.93
TIMP4Q99727 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.99□□□□□ -1.93
TIMP4Q99727 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.99□□□□□ -1.93
TIMP4Q99727 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.99□□□□□ -1.93
TIMP4Q99727 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.99□□□□□ -1.93
TIMP4Q99727 AC024581.2-201ENST00000619986 252 ntBASIC2.99□□□□□ -1.93
TIMP4Q99727 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.99□□□□□ -1.93
TIMP4Q99727 AL450472.1-202ENST00000637286 180 ntBASIC2.99□□□□□ -1.93
TIMP4Q99727 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
TIMP4Q99727 LINC02555-201ENST00000563933 1951 ntBASIC2.99□□□□□ -1.93
TIMP4Q99727 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
TIMP4Q99727 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.98□□□□□ -1.93
TIMP4Q99727 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.98□□□□□ -1.93
TIMP4Q99727 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TIMP4Q99727 Y_RNA.20-201ENST00000362479 113 ntBASIC2.98□□□□□ -1.93
TIMP4Q99727 RNU6-1301P-201ENST00000362724 104 ntBASIC2.98□□□□□ -1.93
TIMP4Q99727 RNA5SP383-201ENST00000362934 120 ntBASIC2.98□□□□□ -1.93
TIMP4Q99727 RNU1-100P-201ENST00000365255 165 ntBASIC2.98□□□□□ -1.93
TIMP4Q99727 Y_RNA.518-201ENST00000384552 113 ntBASIC2.98□□□□□ -1.93
TIMP4Q99727 Y_RNA.539-201ENST00000384635 107 ntBASIC2.98□□□□□ -1.93
TIMP4Q99727 MIR544A-201ENST00000384855 91 ntBASIC2.98□□□□□ -1.93
TIMP4Q99727 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.98□□□□□ -1.93
TIMP4Q99727 AL603908.1-201ENST00000406098 201 ntBASIC2.98□□□□□ -1.93
TIMP4Q99727 AL603910.2-201ENST00000407268 136 ntBASIC2.98□□□□□ -1.93
TIMP4Q99727 AL590135.1-201ENST00000422215 156 ntBASIC2.98□□□□□ -1.93
TIMP4Q99727 AC139712.2-201ENST00000424302 339 ntBASIC2.98□□□□□ -1.93
TIMP4Q99727 AC016700.2-201ENST00000446011 156 ntBASIC2.98□□□□□ -1.93
TIMP4Q99727 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.98□□□□□ -1.93
TIMP4Q99727 AC087477.1-201ENST00000465747 340 ntBASIC2.98□□□□□ -1.93
TIMP4Q99727 PHBP14-201ENST00000512887 367 ntBASIC2.98□□□□□ -1.93
TIMP4Q99727 RNU6-581P-201ENST00000516214 105 ntBASIC2.98□□□□□ -1.93
TIMP4Q99727 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.98□□□□□ -1.93
TIMP4Q99727 RPL23AP88-201ENST00000605759 454 ntBASIC2.98□□□□□ -1.93
TIMP4Q99727 AL365434.2-201ENST00000607979 234 ntBASIC2.98□□□□□ -1.93
TIMP4Q99727 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.98□□□□□ -1.93
TIMP4Q99727 MIR8057-201ENST00000620957 69 ntBASIC2.98□□□□□ -1.93
TIMP4Q99727 SCARNA4-201ENST00000629045 128 ntBASIC2.98□□□□□ -1.93
TIMP4Q99727 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
TIMP4Q99727 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.98□□□□□ -1.93
TIMP4Q99727 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
TIMP4Q99727 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TIMP4Q99727 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.97□□□□□ -1.93
TIMP4Q99727 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.97□□□□□ -1.93
TIMP4Q99727 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
TIMP4Q99727 SNORD113-8-201ENST00000363497 74 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 RNU6-525P-201ENST00000363685 104 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 Y_RNA.277-201ENST00000364754 102 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 RNU6-1280P-201ENST00000365211 107 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 RNU6-1286P-201ENST00000383871 107 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 SNORA29-201ENST00000384183 140 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 RNU6-17P-201ENST00000384245 107 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 Y_RNA.504-201ENST00000384481 104 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 RNU6-18P-201ENST00000384527 107 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 RNU4-70P-201ENST00000384579 139 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 RNU6-541P-201ENST00000384709 110 ntBASIC2.97□□□□□ -1.93
TIMP4Q99727 SNORD78.2-201ENST00000391076 69 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms