Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.33□□□□□ -2.46
COL12A1Q99715 AC011451.2-201ENST00000604303 598 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 7SK.10-201ENST00000621414 298 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 SUGT1P1-201ENST00000379514 476 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 RNU6-747P-201ENST00000390928 104 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 RNU6-241P-201ENST00000391148 104 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 RNA5SP482-201ENST00000391269 118 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.33□□□□□ -2.46
COL12A1Q99715 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-0.33□□□□□ -2.46
COL12A1Q99715 AC092573.2-201ENST00000434546 243 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 RNF138P1-201ENST00000502765 546 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 RNU6-917P-201ENST00000516294 104 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC-0.33□□□□□ -2.46
COL12A1Q99715 MIR548Y-201ENST00000582739 110 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 AC138207.3-201ENST00000585289 166 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 AL133445.2-201ENST00000611191 527 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 MIR6129-201ENST00000616087 109 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 AL359697.1-201ENST00000624879 587 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 RNU4-36P-201ENST00000364294 144 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 SEPT7P5-201ENST00000434048 306 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 SEPT7P4-201ENST00000437076 306 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 USP9YP29-201ENST00000445112 563 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 RPL17P19-201ENST00000489069 552 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 SNORA27.4-201ENST00000516650 95 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 AC112693.2-201ENST00000556538 232 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC-0.34□□□□□ -2.46
COL12A1Q99715 MIR5591-201ENST00000578248 65 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 MIR4743-201ENST00000584576 69 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 AC112220.2-201ENST00000605513 533 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 RNA5SP258-201ENST00000362750 119 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 RNU6-793P-201ENST00000384233 104 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 MIR892B-201ENST00000401279 77 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 AL079342.2-201ENST00000403367 482 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 AL953862.1-201ENST00000423016 168 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 AC007969.2-201ENST00000441891 191 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.34□□□□□ -2.46
COL12A1Q99715 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC-0.34□□□□□ -2.46
COL12A1Q99715 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.34□□□□□ -2.46
COL12A1Q99715 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC-0.34□□□□□ -2.46
COL12A1Q99715 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.34□□□□□ -2.46
COL12A1Q99715 AC084824.4-201ENST00000620106 731 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 AC092634.7-201ENST00000621022 103 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.34□□□□□ -2.46
COL12A1Q99715 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.34□□□□□ -2.46
COL12A1Q99715 U8.5-201ENST00000364528 136 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 AF228730.1-201ENST00000397972 663 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-0.34□□□□□ -2.46
COL12A1Q99715 FABP5P14-201ENST00000437273 393 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 MTCO2P25-201ENST00000447065 681 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.34□□□□□ -2.46
COL12A1Q99715 RNU6-1282P-201ENST00000516735 96 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 SNORD19.2-201ENST00000516978 73 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 AC122134.1-202ENST00000569111 1201 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 SNORA77B-201ENST00000578179 125 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC-0.34□□□□□ -2.46
COL12A1Q99715 AP000860.1-201ENST00000605250 559 ntBASIC-0.34□□□□□ -2.46
COL12A1Q99715 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC-0.34□□□□□ -2.46
COL12A1Q99715 RNU6-270P-201ENST00000364131 105 ntBASIC-0.35□□□□□ -2.47
COL12A1Q99715 RNU6-1280P-201ENST00000365211 107 ntBASIC-0.35□□□□□ -2.47
COL12A1Q99715 RNY1P8-201ENST00000383970 114 ntBASIC-0.35□□□□□ -2.47
COL12A1Q99715 RNU6-116P-201ENST00000384042 109 ntBASIC-0.35□□□□□ -2.47
COL12A1Q99715 RNU6-815P-201ENST00000384080 113 ntBASIC-0.35□□□□□ -2.47
COL12A1Q99715 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
COL12A1Q99715 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
COL12A1Q99715 TAAR7P-201ENST00000436141 242 ntBASIC-0.35□□□□□ -2.47
COL12A1Q99715 HMGB1P30-201ENST00000492455 606 ntBASIC-0.35□□□□□ -2.47
COL12A1Q99715 RNU6-706P-201ENST00000517229 104 ntBASIC-0.35□□□□□ -2.47
COL12A1Q99715 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC-0.35□□□□□ -2.47
COL12A1Q99715 AP003465.2-201ENST00000602571 373 ntBASIC-0.35□□□□□ -2.47
COL12A1Q99715 AC004805.2-201ENST00000605382 482 ntBASIC-0.35□□□□□ -2.47
COL12A1Q99715 AL157786.1-207ENST00000627771 695 ntBASIC-0.35□□□□□ -2.47
COL12A1Q99715 MIR1262-201ENST00000408276 93 ntBASIC-0.35□□□□□ -2.47
COL12A1Q99715 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.35□□□□□ -2.47
COL12A1Q99715 MRPS17P3-201ENST00000465453 385 ntBASIC-0.35□□□□□ -2.47
COL12A1Q99715 RNU6-118P-201ENST00000516552 102 ntBASIC-0.35□□□□□ -2.47
COL12A1Q99715 RNU6-1092P-201ENST00000516955 87 ntBASIC-0.35□□□□□ -2.47
COL12A1Q99715 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC-0.35□□□□□ -2.47
COL12A1Q99715 AC025678.1-201ENST00000567861 338 ntBASIC-0.35□□□□□ -2.47
COL12A1Q99715 AC078938.1-201ENST00000620993 318 ntBASIC-0.35□□□□□ -2.47
COL12A1Q99715 LINC02555-201ENST00000563933 1951 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 RNU4-79P-201ENST00000362764 141 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 RNU6-163P-201ENST00000384396 106 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 RNA5SP56-201ENST00000410277 118 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 AL162395.1-201ENST00000457882 422 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 RNU7-56P-201ENST00000458744 62 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 RNU7-90P-201ENST00000459216 62 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.36□□□□□ -2.47
COL12A1Q99715 MIR3664-201ENST00000579074 99 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC-0.36□□□□□ -2.47
COL12A1Q99715 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC-0.36□□□□□ -2.47
COL12A1Q99715 AC119751.3-201ENST00000399720 670 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 AL591034.2-201ENST00000402839 359 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 RNU6-712P-201ENST00000410558 100 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 RNU6-274P-201ENST00000459566 107 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.36□□□□□ -2.47
COL12A1Q99715 AC022616.3-201ENST00000523940 148 ntBASIC-0.36□□□□□ -2.47
COL12A1Q99715 AC009268.1-201ENST00000561352 1203 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms