Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RNU6-348P-201ENST00000384386 107 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 RNU6-1060P-201ENST00000384664 107 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 RNU11-3P-201ENST00000391111 133 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 Y_RNA.597-201ENST00000410463 100 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 RNU4-46P-201ENST00000410818 138 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 AC009310.1-201ENST00000414414 451 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 MTND3P17-201ENST00000416968 344 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 MTCO2P34-201ENST00000421994 607 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 AC009961.2-201ENST00000435771 251 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 HSPE1P21-201ENST00000438283 308 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 GAPDHP17-201ENST00000449858 1001 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.47□□□□□ -2.17
COL21A1Q96P44 RNU6-956P-201ENST00000458868 103 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 RNU7-182P-201ENST00000459009 62 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 SNORD13-201ENST00000459299 104 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 AC027575.1-201ENST00000481064 460 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.47□□□□□ -2.17
COL21A1Q96P44 MTND3P25-201ENST00000509243 135 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 LRRC34P2-201ENST00000514850 553 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 SNORD27.1-201ENST00000516319 72 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 RNU6-1220P-201ENST00000517126 108 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 AP001893.2-201ENST00000526949 202 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 AP002453.2-201ENST00000533503 320 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.47□□□□□ -2.17
COL21A1Q96P44 AC006362.1-201ENST00000567392 174 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 AC040904.1-201ENST00000590850 223 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 AC073539.2-201ENST00000597113 165 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 AC245008.1-201ENST00000608123 476 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
COL21A1Q96P44 SEPT14P19-203ENST00000633205 211 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 AC090582.1-201ENST00000636321 199 ntBASIC1.47□□□□□ -2.17
COL21A1Q96P44 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
COL21A1Q96P44 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
COL21A1Q96P44 SNORD115-3-201ENST00000363100 82 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 Y_RNA.201-201ENST00000364052 96 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 Y_RNA.359-201ENST00000365498 102 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 Y_RNA.367-201ENST00000365544 101 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 AL357139.1-201ENST00000407792 426 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.46□□□□□ -2.18
COL21A1Q96P44 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.46□□□□□ -2.18
COL21A1Q96P44 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.46□□□□□ -2.18
COL21A1Q96P44 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.46□□□□□ -2.18
COL21A1Q96P44 BX510359.4-201ENST00000423750 193 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 MTND1P29-201ENST00000448112 647 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.46□□□□□ -2.18
COL21A1Q96P44 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.46□□□□□ -2.18
COL21A1Q96P44 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.46□□□□□ -2.18
COL21A1Q96P44 ARL2BPP4-201ENST00000506854 471 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 AC105313.1-201ENST00000509121 353 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 AC096745.1-201ENST00000509945 370 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.46□□□□□ -2.18
COL21A1Q96P44 AC008834.1-201ENST00000511612 175 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 SNORA18.6-201ENST00000516792 115 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 RNA5SP480-201ENST00000516840 109 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.46□□□□□ -2.18
COL21A1Q96P44 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.46□□□□□ -2.18
COL21A1Q96P44 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.46□□□□□ -2.18
COL21A1Q96P44 MIR3913-1-201ENST00000577744 102 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 NBR2-204ENST00000587322 63 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 BNIP3P16-201ENST00000589779 534 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 AC245014.2-201ENST00000603689 287 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 AC246785.4-201ENST00000605374 287 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 AC006566.1-201ENST00000608943 513 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 AC009509.4-201ENST00000619202 509 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 AC048344.4-201ENST00000619744 527 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 AP000648.3-201ENST00000623539 4507 ntBASIC1.46□□□□□ -2.18
COL21A1Q96P44 snoU2_19.1-201ENST00000362361 80 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 RNU6-1285P-201ENST00000363480 105 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 RNU6-105P-201ENST00000363909 104 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 RNU6-1164P-201ENST00000364428 107 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 Y_RNA.324-201ENST00000365165 102 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 RNU6-116P-201ENST00000384042 109 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 RNU6-160P-201ENST00000384591 107 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 RNU6-550P-201ENST00000391057 101 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 DEFB108C-201ENST00000400154 252 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.45□□□□□ -2.18
COL21A1Q96P44 CYCSP33-201ENST00000414485 327 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
COL21A1Q96P44 AC016907.1-201ENST00000419483 435 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 AL596276.1-201ENST00000434465 418 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.45□□□□□ -2.18
COL21A1Q96P44 AC244505.5-201ENST00000443639 207 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 MTND1P27-201ENST00000451117 902 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 AC023790.1-201ENST00000482174 347 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 AC093259.1-201ENST00000509755 300 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 AC079140.3-201ENST00000511111 550 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.45□□□□□ -2.18
COL21A1Q96P44 RNU6-377P-201ENST00000515965 102 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.45□□□□□ -2.18
COL21A1Q96P44 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.45□□□□□ -2.18
COL21A1Q96P44 MIR4528-201ENST00000577763 90 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 SNORD53B-201ENST00000577887 78 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 SNORA4-201ENST00000584302 138 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.45□□□□□ -2.18
COL21A1Q96P44 AC064872.1-201ENST00000604823 1072 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 AC008945.2-201ENST00000606056 604 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 AC011155.2-201ENST00000623202 216 ntBASIC1.45□□□□□ -2.18
COL21A1Q96P44 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms