Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.31□□□□□ -2.36
CCDC115Q96NT0 MTCO3P18-201ENST00000440206 761 ntBASIC0.31□□□□□ -2.36
CCDC115Q96NT0 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.31□□□□□ -2.36
CCDC115Q96NT0 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.31□□□□□ -2.36
CCDC115Q96NT0 MTCO3P7-201ENST00000510008 774 ntBASIC0.31□□□□□ -2.36
CCDC115Q96NT0 AC115990.1-201ENST00000526957 301 ntBASIC0.31□□□□□ -2.36
CCDC115Q96NT0 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.31□□□□□ -2.36
CCDC115Q96NT0 MIR4711-201ENST00000578274 70 ntBASIC0.31□□□□□ -2.36
CCDC115Q96NT0 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.31□□□□□ -2.36
CCDC115Q96NT0 AC174048.1-201ENST00000603389 144 ntBASIC0.31□□□□□ -2.36
CCDC115Q96NT0 AL022154.1-201ENST00000604698 785 ntBASIC0.31□□□□□ -2.36
CCDC115Q96NT0 Y_RNA.796-201ENST00000364268 102 ntBASIC0.3□□□□□ -2.36
CCDC115Q96NT0 Y_RNA.799-201ENST00000364992 102 ntBASIC0.3□□□□□ -2.36
CCDC115Q96NT0 SNORA4.2-201ENST00000365313 147 ntBASIC0.3□□□□□ -2.36
CCDC115Q96NT0 SNORA32.2-201ENST00000384049 122 ntBASIC0.3□□□□□ -2.36
CCDC115Q96NT0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
CCDC115Q96NT0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
CCDC115Q96NT0 RPS3AP37-201ENST00000419176 745 ntBASIC0.3□□□□□ -2.36
CCDC115Q96NT0 MTCO2P1-201ENST00000424648 477 ntBASIC0.3□□□□□ -2.36
CCDC115Q96NT0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.3□□□□□ -2.36
CCDC115Q96NT0 MTCYBP42-201ENST00000444653 1130 ntBASIC0.3□□□□□ -2.36
CCDC115Q96NT0 AC093899.1-201ENST00000457984 376 ntBASIC0.3□□□□□ -2.36
CCDC115Q96NT0 AC104806.1-201ENST00000508720 308 ntBASIC0.3□□□□□ -2.36
CCDC115Q96NT0 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CCDC115Q96NT0 SUMO2P16-201ENST00000519475 264 ntBASIC0.3□□□□□ -2.36
CCDC115Q96NT0 AP001893.2-201ENST00000526949 202 ntBASIC0.3□□□□□ -2.36
CCDC115Q96NT0 AC087897.1-201ENST00000550134 156 ntBASIC0.3□□□□□ -2.36
CCDC115Q96NT0 AC126177.8-201ENST00000618339 1015 ntBASIC0.3□□□□□ -2.36
CCDC115Q96NT0 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
CCDC115Q96NT0 RNU4-15P-201ENST00000362613 141 ntBASIC0.29□□□□□ -2.36
CCDC115Q96NT0 RNY1-201ENST00000364228 113 ntBASIC0.29□□□□□ -2.36
CCDC115Q96NT0 RNU6-777P-201ENST00000364265 104 ntBASIC0.29□□□□□ -2.36
CCDC115Q96NT0 VTRNA1-3-201ENST00000365645 89 ntBASIC0.29□□□□□ -2.36
CCDC115Q96NT0 SNORA80D-201ENST00000384488 135 ntBASIC0.29□□□□□ -2.36
CCDC115Q96NT0 MIR598-201ENST00000384868 97 ntBASIC0.29□□□□□ -2.36
CCDC115Q96NT0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.29□□□□□ -2.36
CCDC115Q96NT0 AC245047.7-201ENST00000440265 293 ntBASIC0.29□□□□□ -2.36
CCDC115Q96NT0 GAPDHP17-201ENST00000449858 1001 ntBASIC0.29□□□□□ -2.36
CCDC115Q96NT0 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.29□□□□□ -2.36
CCDC115Q96NT0 ART2BP-201ENST00000453501 499 ntBASIC0.29□□□□□ -2.36
CCDC115Q96NT0 RNU7-34P-201ENST00000459394 64 ntBASIC0.29□□□□□ -2.36
CCDC115Q96NT0 RNA5SP436-201ENST00000516020 115 ntBASIC0.29□□□□□ -2.36
CCDC115Q96NT0 Y_RNA.687-201ENST00000516558 91 ntBASIC0.29□□□□□ -2.36
CCDC115Q96NT0 APOOP3-201ENST00000536787 586 ntBASIC0.29□□□□□ -2.36
CCDC115Q96NT0 AL136520.1-202ENST00000555494 763 ntBASIC0.29□□□□□ -2.36
CCDC115Q96NT0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.29□□□□□ -2.36
CCDC115Q96NT0 Z83818.1-201ENST00000603584 150 ntBASIC0.29□□□□□ -2.36
CCDC115Q96NT0 AC006270.3-201ENST00000605967 1036 ntBASIC0.29□□□□□ -2.36
CCDC115Q96NT0 MIR15A-201ENST00000607334 83 ntBASIC0.29□□□□□ -2.36
CCDC115Q96NT0 AC124016.2-201ENST00000610058 665 ntBASIC0.29□□□□□ -2.36
CCDC115Q96NT0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.29□□□□□ -2.36
CCDC115Q96NT0 AL589743.1-201ENST00000551932 2712 ntBASIC0.28□□□□□ -2.36
CCDC115Q96NT0 U3.8-201ENST00000363675 217 ntBASIC0.28□□□□□ -2.36
CCDC115Q96NT0 RNU6-945P-201ENST00000383947 107 ntBASIC0.28□□□□□ -2.36
CCDC115Q96NT0 AF228730.1-201ENST00000397972 663 ntBASIC0.28□□□□□ -2.36
CCDC115Q96NT0 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.28□□□□□ -2.36
CCDC115Q96NT0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.28□□□□□ -2.36
CCDC115Q96NT0 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.28□□□□□ -2.36
CCDC115Q96NT0 AC024940.5-201ENST00000622889 474 ntBASIC0.28□□□□□ -2.36
CCDC115Q96NT0 AC068787.1-201ENST00000623908 691 ntBASIC0.28□□□□□ -2.36
CCDC115Q96NT0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.37
CCDC115Q96NT0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
CCDC115Q96NT0 SMIM11P1-201ENST00000369586 178 ntBASIC0.27□□□□□ -2.37
CCDC115Q96NT0 RNU6-969P-201ENST00000383900 105 ntBASIC0.27□□□□□ -2.37
CCDC115Q96NT0 SNORA12.2-201ENST00000391040 156 ntBASIC0.27□□□□□ -2.37
CCDC115Q96NT0 RPS3AP36-201ENST00000398190 775 ntBASIC0.27□□□□□ -2.37
CCDC115Q96NT0 AL596276.1-201ENST00000434465 418 ntBASIC0.27□□□□□ -2.37
CCDC115Q96NT0 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.27□□□□□ -2.37
CCDC115Q96NT0 AC022447.4-201ENST00000504053 364 ntBASIC0.27□□□□□ -2.37
CCDC115Q96NT0 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.27□□□□□ -2.37
CCDC115Q96NT0 Y_RNA.673-201ENST00000516306 88 ntBASIC0.27□□□□□ -2.37
CCDC115Q96NT0 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.27□□□□□ -2.37
CCDC115Q96NT0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.27□□□□□ -2.37
CCDC115Q96NT0 AL034555.1-201ENST00000604816 211 ntBASIC0.27□□□□□ -2.37
CCDC115Q96NT0 FRG1KP-201ENST00000623592 341 ntBASIC0.27□□□□□ -2.37
CCDC115Q96NT0 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.27□□□□□ -2.37
CCDC115Q96NT0 RNU6-534P-201ENST00000364877 106 ntBASIC0.26□□□□□ -2.37
CCDC115Q96NT0 Y_RNA.363-201ENST00000365529 113 ntBASIC0.26□□□□□ -2.37
CCDC115Q96NT0 RNA5SP193-201ENST00000410353 107 ntBASIC0.26□□□□□ -2.37
CCDC115Q96NT0 AC011233.1-201ENST00000422812 283 ntBASIC0.26□□□□□ -2.37
CCDC115Q96NT0 AP003355.1-201ENST00000518956 587 ntBASIC0.26□□□□□ -2.37
CCDC115Q96NT0 DEFB130C-202ENST00000530001 230 ntBASIC0.26□□□□□ -2.37
CCDC115Q96NT0 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.26□□□□□ -2.37
CCDC115Q96NT0 AC021506.2-201ENST00000612354 169 ntBASIC0.26□□□□□ -2.37
CCDC115Q96NT0 AC078880.5-201ENST00000617845 421 ntBASIC0.26□□□□□ -2.37
CCDC115Q96NT0 SNORD3E-202ENST00000627253 216 ntBASIC0.26□□□□□ -2.37
CCDC115Q96NT0 MIR6516-201ENST00000630554 81 ntBASIC0.26□□□□□ -2.37
CCDC115Q96NT0 AC134026.1-201ENST00000623249 2239 ntBASIC0.26□□□□□ -2.37
CCDC115Q96NT0 SNORD31B-201ENST00000364977 69 ntBASIC0.25□□□□□ -2.37
CCDC115Q96NT0 SNORA72.2-201ENST00000365028 127 ntBASIC0.25□□□□□ -2.37
CCDC115Q96NT0 RNU4-22P-201ENST00000411058 166 ntBASIC0.25□□□□□ -2.37
CCDC115Q96NT0 AC092423.1-201ENST00000430165 186 ntBASIC0.25□□□□□ -2.37
CCDC115Q96NT0 AL035398.1-201ENST00000430869 322 ntBASIC0.25□□□□□ -2.37
CCDC115Q96NT0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.25□□□□□ -2.37
CCDC115Q96NT0 AC007969.2-201ENST00000441891 191 ntBASIC0.25□□□□□ -2.37
CCDC115Q96NT0 AC007395.1-201ENST00000451333 677 ntBASIC0.25□□□□□ -2.37
CCDC115Q96NT0 AC091435.1-201ENST00000505442 584 ntBASIC0.25□□□□□ -2.37
CCDC115Q96NT0 AC105758.1-201ENST00000506038 399 ntBASIC0.25□□□□□ -2.37
CCDC115Q96NT0 AC119751.4-201ENST00000507498 357 ntBASIC0.25□□□□□ -2.37
CCDC115Q96NT0 RNU6-1041P-201ENST00000516254 102 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms