Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.56□□□□□ -2.16
USP47Q96K76 AC104136.1-201ENST00000512969 394 ntBASIC1.56□□□□□ -2.16
USP47Q96K76 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.56□□□□□ -2.16
USP47Q96K76 AP001372.4-201ENST00000524889 472 ntBASIC1.56□□□□□ -2.16
USP47Q96K76 AC022254.1-201ENST00000567857 235 ntBASIC1.56□□□□□ -2.16
USP47Q96K76 AC109446.2-201ENST00000567872 497 ntBASIC1.56□□□□□ -2.16
USP47Q96K76 MTATP6P3-201ENST00000581686 676 ntBASIC1.56□□□□□ -2.16
USP47Q96K76 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.56□□□□□ -2.16
USP47Q96K76 CYP2C61P-201ENST00000604072 290 ntBASIC1.56□□□□□ -2.16
USP47Q96K76 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.56□□□□□ -2.16
USP47Q96K76 AC008250.2-201ENST00000615261 205 ntBASIC1.56□□□□□ -2.16
USP47Q96K76 AC138649.3-201ENST00000622154 254 ntBASIC1.56□□□□□ -2.16
USP47Q96K76 U4.7-201ENST00000638126 106 ntBASIC1.56□□□□□ -2.16
USP47Q96K76 MTND5P17-201ENST00000418405 1603 ntBASIC1.56□□□□□ -2.16
USP47Q96K76 AC245060.5-201ENST00000610778 3293 ntBASIC1.56□□□□□ -2.16
USP47Q96K76 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
USP47Q96K76 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.55□□□□□ -2.16
USP47Q96K76 RNU6-37P-201ENST00000362692 107 ntBASIC1.55□□□□□ -2.16
USP47Q96K76 RNU6-11P-201ENST00000364234 107 ntBASIC1.55□□□□□ -2.16
USP47Q96K76 RNU6-25P-201ENST00000383873 107 ntBASIC1.55□□□□□ -2.16
USP47Q96K76 RNU6-48P-201ENST00000384161 107 ntBASIC1.55□□□□□ -2.16
USP47Q96K76 RNU6-16P-201ENST00000384385 107 ntBASIC1.55□□□□□ -2.16
USP47Q96K76 RNU6-15P-201ENST00000384534 107 ntBASIC1.55□□□□□ -2.16
USP47Q96K76 RNU6-29P-201ENST00000384637 107 ntBASIC1.55□□□□□ -2.16
USP47Q96K76 AL031577.2-201ENST00000404133 280 ntBASIC1.55□□□□□ -2.16
USP47Q96K76 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.55□□□□□ -2.16
USP47Q96K76 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.55□□□□□ -2.16
USP47Q96K76 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.55□□□□□ -2.16
USP47Q96K76 AC096745.1-201ENST00000509945 370 ntBASIC1.55□□□□□ -2.16
USP47Q96K76 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.55□□□□□ -2.16
USP47Q96K76 AC106038.2-201ENST00000520706 568 ntBASIC1.55□□□□□ -2.16
USP47Q96K76 ZNF321P-202ENST00000550843 495 ntBASIC1.55□□□□□ -2.16
USP47Q96K76 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.55□□□□□ -2.16
USP47Q96K76 AC009094.1-201ENST00000564443 426 ntBASIC1.55□□□□□ -2.16
USP47Q96K76 AC103810.8-201ENST00000607347 118 ntBASIC1.55□□□□□ -2.16
USP47Q96K76 AC011155.2-201ENST00000623202 216 ntBASIC1.55□□□□□ -2.16
USP47Q96K76 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
USP47Q96K76 RNU4-42P-201ENST00000364738 142 ntBASIC1.54□□□□□ -2.16
USP47Q96K76 Y_RNA.324-201ENST00000365165 102 ntBASIC1.54□□□□□ -2.16
USP47Q96K76 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.54□□□□□ -2.16
USP47Q96K76 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.54□□□□□ -2.16
USP47Q96K76 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.54□□□□□ -2.16
USP47Q96K76 ATP5J2P3-201ENST00000451550 258 ntBASIC1.54□□□□□ -2.16
USP47Q96K76 AC087343.1-201ENST00000477341 475 ntBASIC1.54□□□□□ -2.16
USP47Q96K76 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.54□□□□□ -2.16
USP47Q96K76 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.54□□□□□ -2.16
USP47Q96K76 RNU6-377P-201ENST00000515965 102 ntBASIC1.54□□□□□ -2.16
USP47Q96K76 RNU6-1178P-201ENST00000516674 107 ntBASIC1.54□□□□□ -2.16
USP47Q96K76 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.54□□□□□ -2.16
USP47Q96K76 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.54□□□□□ -2.16
USP47Q96K76 AP001893.2-201ENST00000526949 202 ntBASIC1.54□□□□□ -2.16
USP47Q96K76 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.54□□□□□ -2.16
USP47Q96K76 MIR3682-201ENST00000581338 84 ntBASIC1.54□□□□□ -2.16
USP47Q96K76 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.54□□□□□ -2.16
USP47Q96K76 AC092354.1-201ENST00000606057 376 ntBASIC1.54□□□□□ -2.16
USP47Q96K76 Z69720.2-201ENST00000624755 279 ntBASIC1.54□□□□□ -2.16
USP47Q96K76 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.54□□□□□ -2.16
USP47Q96K76 AC091812.1-201ENST00000432235 1948 ntBASIC1.54□□□□□ -2.16
USP47Q96K76 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
USP47Q96K76 Y_RNA.99-201ENST00000363138 105 ntBASIC1.53□□□□□ -2.16
USP47Q96K76 SNORA62.1-201ENST00000364287 154 ntBASIC1.53□□□□□ -2.16
USP47Q96K76 VN1R36P-201ENST00000414936 291 ntBASIC1.53□□□□□ -2.16
USP47Q96K76 SNRPEP10-201ENST00000420249 274 ntBASIC1.53□□□□□ -2.16
USP47Q96K76 MTND4P20-201ENST00000424125 869 ntBASIC1.53□□□□□ -2.16
USP47Q96K76 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.53□□□□□ -2.16
USP47Q96K76 RNU6-232P-201ENST00000517144 64 ntBASIC1.53□□□□□ -2.16
USP47Q96K76 AC022880.1-201ENST00000534017 973 ntBASIC1.53□□□□□ -2.16
USP47Q96K76 AC104073.3-201ENST00000610942 955 ntBASIC1.53□□□□□ -2.16
USP47Q96K76 AC122133.1-201ENST00000613964 233 ntBASIC1.53□□□□□ -2.16
USP47Q96K76 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.53□□□□□ -2.17
USP47Q96K76 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
USP47Q96K76 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
USP47Q96K76 Y_RNA.36-201ENST00000362602 112 ntBASIC1.52□□□□□ -2.17
USP47Q96K76 Y_RNA.367-201ENST00000365544 101 ntBASIC1.52□□□□□ -2.17
USP47Q96K76 RNU6-550P-201ENST00000391057 101 ntBASIC1.52□□□□□ -2.17
USP47Q96K76 RNU6-1245P-201ENST00000411130 106 ntBASIC1.52□□□□□ -2.17
USP47Q96K76 RNU6-293P-201ENST00000411259 106 ntBASIC1.52□□□□□ -2.17
USP47Q96K76 AC009310.1-201ENST00000414414 451 ntBASIC1.52□□□□□ -2.17
USP47Q96K76 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
USP47Q96K76 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.52□□□□□ -2.17
USP47Q96K76 AC243964.1-201ENST00000441814 261 ntBASIC1.52□□□□□ -2.17
USP47Q96K76 AC079448.1-201ENST00000449377 373 ntBASIC1.52□□□□□ -2.17
USP47Q96K76 GAPDHP17-201ENST00000449858 1001 ntBASIC1.52□□□□□ -2.17
USP47Q96K76 SNRPGP7-201ENST00000469016 106 ntBASIC1.52□□□□□ -2.17
USP47Q96K76 ARL2BPP4-201ENST00000506854 471 ntBASIC1.52□□□□□ -2.17
USP47Q96K76 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.52□□□□□ -2.17
USP47Q96K76 MTND3P5-201ENST00000512798 333 ntBASIC1.52□□□□□ -2.17
USP47Q96K76 RNU6-759P-201ENST00000516740 103 ntBASIC1.52□□□□□ -2.17
USP47Q96K76 RNU6-410P-201ENST00000517006 107 ntBASIC1.52□□□□□ -2.17
USP47Q96K76 AC016727.2-201ENST00000603988 621 ntBASIC1.52□□□□□ -2.17
USP47Q96K76 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
USP47Q96K76 AC099842.1-201ENST00000619919 596 ntBASIC1.52□□□□□ -2.17
USP47Q96K76 AF246928.1-201ENST00000623768 87 ntBASIC1.52□□□□□ -2.17
USP47Q96K76 AC079248.2-201ENST00000623779 326 ntBASIC1.52□□□□□ -2.17
USP47Q96K76 AL603839.4-201ENST00000624658 1005 ntBASIC1.52□□□□□ -2.17
USP47Q96K76 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.52□□□□□ -2.17
USP47Q96K76 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
USP47Q96K76 RNU6-1285P-201ENST00000363480 105 ntBASIC1.51□□□□□ -2.17
USP47Q96K76 RNU6-105P-201ENST00000363909 104 ntBASIC1.51□□□□□ -2.17
USP47Q96K76 RNA5SP493-201ENST00000364115 91 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms