Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 U6.99-201ENST00000637524 83 ntBASIC4.24□□□□□ -1.73
TRIM11Q96F44 AL133383.2-201ENST00000622958 2336 ntBASIC4.24□□□□□ -1.73
TRIM11Q96F44 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRIM11Q96F44 AC068700.1-201ENST00000565862 3754 ntBASIC4.24□□□□□ -1.73
TRIM11Q96F44 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM11Q96F44 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM11Q96F44 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.23□□□□□ -1.73
TRIM11Q96F44 MAPK10-253ENST00000641010 4072 ntBASIC4.23□□□□□ -1.73
TRIM11Q96F44 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM11Q96F44 Y_RNA.24-201ENST00000362508 103 ntBASIC4.23□□□□□ -1.73
TRIM11Q96F44 Y_RNA.287-201ENST00000364853 94 ntBASIC4.23□□□□□ -1.73
TRIM11Q96F44 MIR15B-201ENST00000385045 98 ntBASIC4.23□□□□□ -1.73
TRIM11Q96F44 MIR607-201ENST00000385241 96 ntBASIC4.23□□□□□ -1.73
TRIM11Q96F44 SNORA40.5-201ENST00000391061 128 ntBASIC4.23□□□□□ -1.73
TRIM11Q96F44 MIR937-201ENST00000401271 86 ntBASIC4.23□□□□□ -1.73
TRIM11Q96F44 RN7SKP53-201ENST00000411337 315 ntBASIC4.23□□□□□ -1.73
TRIM11Q96F44 AC079780.1-201ENST00000428259 207 ntBASIC4.23□□□□□ -1.73
TRIM11Q96F44 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.23□□□□□ -1.73
TRIM11Q96F44 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM11Q96F44 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.23□□□□□ -1.73
TRIM11Q96F44 HSPE1P13-201ENST00000451143 297 ntBASIC4.23□□□□□ -1.73
TRIM11Q96F44 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM11Q96F44 RN7SL860P-201ENST00000473738 223 ntBASIC4.23□□□□□ -1.73
TRIM11Q96F44 RN7SL459P-201ENST00000481078 302 ntBASIC4.23□□□□□ -1.73
TRIM11Q96F44 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.23□□□□□ -1.73
TRIM11Q96F44 RNU6-436P-201ENST00000516171 114 ntBASIC4.23□□□□□ -1.73
TRIM11Q96F44 RNU2-58P-201ENST00000516403 183 ntBASIC4.23□□□□□ -1.73
TRIM11Q96F44 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.23□□□□□ -1.73
TRIM11Q96F44 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM11Q96F44 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.23□□□□□ -1.73
TRIM11Q96F44 MIR3921-201ENST00000577308 85 ntBASIC4.23□□□□□ -1.73
TRIM11Q96F44 AC008745.1-201ENST00000604064 271 ntBASIC4.23□□□□□ -1.73
TRIM11Q96F44 AC108081.1-201ENST00000604358 221 ntBASIC4.23□□□□□ -1.73
TRIM11Q96F44 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM11Q96F44 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.23□□□□□ -1.73
TRIM11Q96F44 ZNF702P-202ENST00000434269 1966 ntBASIC4.23□□□□□ -1.73
TRIM11Q96F44 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
TRIM11Q96F44 AC010329.5-201ENST00000623497 2174 ntBASIC4.23□□□□□ -1.73
TRIM11Q96F44 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM11Q96F44 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
TRIM11Q96F44 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
TRIM11Q96F44 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM11Q96F44 RNU6-235P-201ENST00000362644 107 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 RNA5SP235-201ENST00000365411 114 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 Y_RNA.393-201ENST00000383936 102 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 RNU6-32P-201ENST00000383948 107 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 U1.1-201ENST00000384101 164 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 RNU6-793P-201ENST00000384233 104 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 RNU6-13P-201ENST00000384248 107 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 RNU6-12P-201ENST00000384604 107 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 RNU6-41P-201ENST00000384741 107 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 Y_RNA.572-201ENST00000384757 98 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 AL355497.1-201ENST00000406262 551 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 RNU6-588P-201ENST00000410281 105 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 RNA5SP475-201ENST00000410568 110 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 RPS26P42-201ENST00000413485 326 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM11Q96F44 AL356867.1-201ENST00000429623 299 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM11Q96F44 AC083863.1-201ENST00000438811 231 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 RPS27P1-201ENST00000450552 247 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM11Q96F44 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TRIM11Q96F44 AC026726.1-201ENST00000512859 601 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 SNORA31.20-201ENST00000517111 133 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 RNA5SP291-201ENST00000517222 105 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 HSPE1P4-201ENST00000550617 308 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 Y_RNA.757-201ENST00000578934 114 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 MIR3121-201ENST00000579680 77 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.22□□□□□ -1.73
TRIM11Q96F44 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM11Q96F44 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM11Q96F44 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM11Q96F44 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
TRIM11Q96F44 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM11Q96F44 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM11Q96F44 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.21□□□□□ -1.74
TRIM11Q96F44 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM11Q96F44 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TRIM11Q96F44 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TRIM11Q96F44 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM11Q96F44 RNU6-942P-201ENST00000363002 107 ntBASIC4.21□□□□□ -1.74
TRIM11Q96F44 RNU1-32P-201ENST00000363937 159 ntBASIC4.21□□□□□ -1.74
TRIM11Q96F44 RNU6-324P-201ENST00000363957 106 ntBASIC4.21□□□□□ -1.74
TRIM11Q96F44 Y_RNA.495-201ENST00000384435 112 ntBASIC4.21□□□□□ -1.74
TRIM11Q96F44 SNORA75.5-201ENST00000391291 81 ntBASIC4.21□□□□□ -1.74
TRIM11Q96F44 U3.40-201ENST00000408706 208 ntBASIC4.21□□□□□ -1.74
TRIM11Q96F44 AC016397.1-201ENST00000412463 242 ntBASIC4.21□□□□□ -1.74
TRIM11Q96F44 AC096649.2-201ENST00000416186 393 ntBASIC4.21□□□□□ -1.74
TRIM11Q96F44 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.21□□□□□ -1.74
TRIM11Q96F44 AL162151.2-201ENST00000448875 158 ntBASIC4.21□□□□□ -1.74
TRIM11Q96F44 AC245047.8-201ENST00000456455 284 ntBASIC4.21□□□□□ -1.74
TRIM11Q96F44 snoU13.24-201ENST00000458998 104 ntBASIC4.21□□□□□ -1.74
TRIM11Q96F44 Y_RNA.651-201ENST00000459380 103 ntBASIC4.21□□□□□ -1.74
TRIM11Q96F44 AC010285.1-201ENST00000470580 392 ntBASIC4.21□□□□□ -1.74
TRIM11Q96F44 PPIAP15-201ENST00000479662 484 ntBASIC4.21□□□□□ -1.74
TRIM11Q96F44 UBE2CP3-201ENST00000502715 450 ntBASIC4.21□□□□□ -1.74
TRIM11Q96F44 RNU2-12P-201ENST00000517216 168 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms