Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 MTCO3P46-201ENST00000425787 232 ntBASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 ISCA1P6-201ENST00000427740 390 ntBASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 AL360221.1-201ENST00000445989 335 ntBASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 ART2BP-201ENST00000453501 499 ntBASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 MTCO3P7-201ENST00000510008 774 ntBASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 LRRC34P2-201ENST00000514850 553 ntBASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 RN7SKP287-201ENST00000516546 266 ntBASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 AL160236.1-201ENST00000556317 195 ntBASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 MIR4421-201ENST00000578133 69 ntBASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 AC005786.1-201ENST00000588553 154 ntBASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 uc_338.11-201ENST00000619132 160 ntBASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 AL391262.2-201ENST00000622466 494 ntBASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 AC022418.1-201ENST00000624118 445 ntBASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 SEPT14P19-203ENST00000633205 211 ntBASIC1.4□□□□□ -2.19
ECHDC3Q96DC8 MTND5P9-201ENST00000503854 1755 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 RNU6-26P-201ENST00000383985 107 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 RNU6-1029P-201ENST00000384109 107 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 SNORA40.3-201ENST00000390964 122 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 RNU6-955P-201ENST00000410497 104 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 RN7SKP61-201ENST00000410642 295 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 RNU6-1245P-201ENST00000411130 106 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 AL117339.3-201ENST00000418733 162 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 MTCO2P34-201ENST00000421994 607 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 RPL23AP95-201ENST00000426806 265 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 AC010975.2-201ENST00000427781 588 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 RPL31P35-201ENST00000431058 377 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 SNRPGP13-201ENST00000442212 177 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 MIR449C-201ENST00000516047 92 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 RNA5SP490-201ENST00000517141 136 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 SNORA25.17-201ENST00000517184 124 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 SUB1P3-201ENST00000564581 315 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 MIR3915-201ENST00000578518 97 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 AC093424.1-201ENST00000604999 338 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 AL356157.2-201ENST00000605122 111 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 Z99289.3-201ENST00000605586 594 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 AC008945.2-201ENST00000606056 604 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 AC006566.1-201ENST00000608943 513 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 AF246928.1-201ENST00000623768 87 ntBASIC1.39□□□□□ -2.19
ECHDC3Q96DC8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 AC245060.5-201ENST00000610778 3293 ntBASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 Y_RNA.67-201ENST00000362870 100 ntBASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 RNU6-428P-201ENST00000362942 107 ntBASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 AC123900.1-201ENST00000420390 96 ntBASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 AL365203.2-201ENST00000423444 196 ntBASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 AC078809.1-201ENST00000427601 140 ntBASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 Z82205.1-201ENST00000428456 297 ntBASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 SNAP23P1-201ENST00000433229 246 ntBASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 AC244670.1-201ENST00000436879 112 ntBASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 GMFBP1-201ENST00000467831 427 ntBASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 MTCO3P28-201ENST00000513351 515 ntBASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 RNU2-69P-201ENST00000516061 100 ntBASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 AP001893.2-201ENST00000526949 202 ntBASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 MIR4703-201ENST00000577728 79 ntBASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 AL590229.1-201ENST00000603497 542 ntBASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 AC064872.1-201ENST00000604823 1072 ntBASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 snoU13.31-201ENST00000607291 104 ntBASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 AP001596.2-201ENST00000608410 312 ntBASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 AC130454.1-201ENST00000622948 401 ntBASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 MTND5P10-201ENST00000603719 1809 ntBASIC1.38□□□□□ -2.19
ECHDC3Q96DC8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 RNU4-48P-201ENST00000365559 182 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 Y_RNA.480-201ENST00000384364 102 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 RNU6-1127P-201ENST00000384580 107 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 SNORA16.2-201ENST00000390991 127 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 NCOR1P3-201ENST00000420479 303 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 AL133396.1-201ENST00000432048 687 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 AC112492.4-201ENST00000456549 352 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 AC007547.1-201ENST00000462177 490 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 AC130509.1-201ENST00000464158 433 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 AC079382.1-201ENST00000493346 557 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 MTCYBP18-201ENST00000501056 747 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 AC114801.2-201ENST00000503825 781 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 RNA5SP61-201ENST00000516453 100 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 SNORA31.16-201ENST00000516773 139 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 SNORA31.17-201ENST00000516953 127 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms