Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.3□□□□□ -2.36
TTC28Q96AY4 AC021231.3-201ENST00000558497 370 ntBASIC0.3□□□□□ -2.36
TTC28Q96AY4 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.29□□□□□ -2.36
TTC28Q96AY4 Y_RNA.419-201ENST00000384041 102 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 RNU6-1207P-201ENST00000384343 107 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 RNU6-1054P-201ENST00000411293 104 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 AC139712.2-201ENST00000424302 339 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.29□□□□□ -2.36
TTC28Q96AY4 AL135790.2-201ENST00000437701 267 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 MTND2P20-201ENST00000440805 661 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 AL606517.1-201ENST00000446914 387 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 AC104563.1-201ENST00000476147 376 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 RPL30P1-201ENST00000488676 339 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 CYCTP-201ENST00000504253 315 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 SNORA31.19-201ENST00000517079 126 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
TTC28Q96AY4 AC026616.1-201ENST00000523157 525 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 AC022616.8-201ENST00000533569 253 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 AC016256.1-201ENST00000547971 354 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 TMF1P1-201ENST00000576058 373 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 MIR4661-201ENST00000582720 75 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 AP001981.2-201ENST00000603241 418 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 AL358072.1-201ENST00000604156 575 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 AC093648.1-201ENST00000623546 606 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 AC008993.2-201ENST00000631744 806 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 AC132825.7-201ENST00000638744 335 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 MTND4P21-201ENST00000453886 1357 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
TTC28Q96AY4 Y_RNA.566-201ENST00000384735 101 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 MIR124-2-201ENST00000385081 109 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 MIR214-201ENST00000385214 110 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 AC092809.3-201ENST00000415453 231 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 BTF3L4P3-201ENST00000418879 476 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.29□□□□□ -2.36
TTC28Q96AY4 SEPT7P5-201ENST00000434048 306 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 AC099677.2-201ENST00000436385 175 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 ELOCP30-201ENST00000447108 299 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.29□□□□□ -2.36
TTC28Q96AY4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
TTC28Q96AY4 AC009902.1-201ENST00000519351 183 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.29□□□□□ -2.36
TTC28Q96AY4 RAB11AP2-201ENST00000545905 639 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 AL442163.3-201ENST00000554110 156 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 MIR4764-201ENST00000580680 88 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 AF038458.1-201ENST00000588406 262 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 AC090578.1-201ENST00000604955 591 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
TTC28Q96AY4 U6.99-201ENST00000637524 83 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.29□□□□□ -2.36
TTC28Q96AY4 BX322639.1-202ENST00000423987 2213 ntBASIC0.29□□□□□ -2.36
TTC28Q96AY4 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
TTC28Q96AY4 RNU6-1189P-201ENST00000383958 107 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 Y_RNA.416-201ENST00000384014 113 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 RNU6-45P-201ENST00000384471 107 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
TTC28Q96AY4 AC009518.2-201ENST00000418056 731 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.28□□□□□ -2.36
TTC28Q96AY4 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.28□□□□□ -2.36
TTC28Q96AY4 USP9YP22-201ENST00000438971 294 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 HSPE1P9-201ENST00000440046 311 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 MTND4P25-201ENST00000441039 533 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 EXOSC3P1-201ENST00000448649 500 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 MTND1P31-201ENST00000449206 961 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 MTND1P16-201ENST00000465177 898 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.28□□□□□ -2.36
TTC28Q96AY4 AC074344.1-201ENST00000512823 224 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 AC023632.1-201ENST00000518463 375 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.28□□□□□ -2.36
TTC28Q96AY4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.28□□□□□ -2.36
TTC28Q96AY4 AP000860.1-201ENST00000605250 559 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 AC069545.1-201ENST00000605671 358 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.28□□□□□ -2.36
TTC28Q96AY4 RNA5SP327-201ENST00000362494 101 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 SNORA32.1-201ENST00000364514 115 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 RNU6-343P-201ENST00000364709 104 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 RNU6-1274P-201ENST00000384557 107 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 MIR100-201ENST00000385259 80 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 RNU6-910P-201ENST00000390844 107 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 RNU6-1245P-201ENST00000411130 106 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.28□□□□□ -2.36
TTC28Q96AY4 AC016831.2-201ENST00000417179 352 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.28□□□□□ -2.36
TTC28Q96AY4 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
TTC28Q96AY4 BX119904.4-201ENST00000424402 301 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 AC104651.1-201ENST00000427559 735 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 HMGN2P22-201ENST00000427588 175 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 RNU7-136P-201ENST00000458819 69 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 RPL26P26-201ENST00000480251 434 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.28□□□□□ -2.36
TTC28Q96AY4 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.28□□□□□ -2.36
TTC28Q96AY4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.28□□□□□ -2.36
TTC28Q96AY4 AL512310.8-201ENST00000550183 120 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 AC026371.1-201ENST00000551867 419 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 AC002400.1-201ENST00000569310 726 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 AL021879.1-201ENST00000611756 288 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 AL357080.1-201ENST00000617394 239 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 AC011155.2-201ENST00000623202 216 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 AP000676.3-201ENST00000623299 569 ntBASIC0.28□□□□□ -2.36
TTC28Q96AY4 MIR1248-201ENST00000629190 106 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms