Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RNU6-743P-201ENST00000364151 106 ntBASIC2.16□□□□□ -2.06
VPS33AQ96AX1 RNA5SP37-201ENST00000365420 130 ntBASIC2.16□□□□□ -2.06
VPS33AQ96AX1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
VPS33AQ96AX1 RNA5SP184-201ENST00000411071 108 ntBASIC2.16□□□□□ -2.06
VPS33AQ96AX1 MRPS10P2-201ENST00000431226 381 ntBASIC2.16□□□□□ -2.06
VPS33AQ96AX1 RNA5SP24-201ENST00000516478 95 ntBASIC2.16□□□□□ -2.06
VPS33AQ96AX1 AC109635.3-201ENST00000529536 185 ntBASIC2.16□□□□□ -2.06
VPS33AQ96AX1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.16□□□□□ -2.06
VPS33AQ96AX1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.16□□□□□ -2.06
VPS33AQ96AX1 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.16□□□□□ -2.06
VPS33AQ96AX1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.16□□□□□ -2.06
VPS33AQ96AX1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.16□□□□□ -2.06
VPS33AQ96AX1 AF250324.2-201ENST00000608299 610 ntBASIC2.16□□□□□ -2.06
VPS33AQ96AX1 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
VPS33AQ96AX1 FAM157A-202ENST00000615155 405 ntBASIC2.16□□□□□ -2.06
VPS33AQ96AX1 SDR42E1P4-201ENST00000620894 481 ntBASIC2.16□□□□□ -2.06
VPS33AQ96AX1 AP000553.5-201ENST00000641933 54 ntBASIC2.16□□□□□ -2.06
VPS33AQ96AX1 AC009541.1-201ENST00000438279 2662 ntBASIC2.16□□□□□ -2.06
VPS33AQ96AX1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.07
VPS33AQ96AX1 AC009487.4-201ENST00000624969 3585 ntBASIC2.15□□□□□ -2.07
VPS33AQ96AX1 SNORD115-3-201ENST00000363100 82 ntBASIC2.15□□□□□ -2.07
VPS33AQ96AX1 RNU6-234P-201ENST00000365229 104 ntBASIC2.15□□□□□ -2.07
VPS33AQ96AX1 RNU6-128P-201ENST00000383976 107 ntBASIC2.15□□□□□ -2.07
VPS33AQ96AX1 SNORD116-4-201ENST00000384733 96 ntBASIC2.15□□□□□ -2.07
VPS33AQ96AX1 MIR1283-2-201ENST00000408621 87 ntBASIC2.15□□□□□ -2.07
VPS33AQ96AX1 AC096664.2-201ENST00000411843 406 ntBASIC2.15□□□□□ -2.07
VPS33AQ96AX1 SNRPEP10-201ENST00000420249 274 ntBASIC2.15□□□□□ -2.07
VPS33AQ96AX1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.15□□□□□ -2.07
VPS33AQ96AX1 AC006946.1-201ENST00000429106 328 ntBASIC2.15□□□□□ -2.07
VPS33AQ96AX1 NDUFA5P4-201ENST00000436704 385 ntBASIC2.15□□□□□ -2.07
VPS33AQ96AX1 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.15□□□□□ -2.07
VPS33AQ96AX1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.15□□□□□ -2.07
VPS33AQ96AX1 RPL9P9-202ENST00000466501 579 ntBASIC2.15□□□□□ -2.07
VPS33AQ96AX1 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.15□□□□□ -2.07
VPS33AQ96AX1 RPS27P21-201ENST00000486977 252 ntBASIC2.15□□□□□ -2.07
VPS33AQ96AX1 TRBVA-201ENST00000498804 316 ntBASIC2.15□□□□□ -2.07
VPS33AQ96AX1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.15□□□□□ -2.07
VPS33AQ96AX1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.15□□□□□ -2.07
VPS33AQ96AX1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.15□□□□□ -2.07
VPS33AQ96AX1 RPL39P5-202ENST00000512505 151 ntBASIC2.15□□□□□ -2.07
VPS33AQ96AX1 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.15□□□□□ -2.07
VPS33AQ96AX1 MIR5007-201ENST00000583098 95 ntBASIC2.15□□□□□ -2.07
VPS33AQ96AX1 RPL17P51-201ENST00000605218 238 ntBASIC2.15□□□□□ -2.07
VPS33AQ96AX1 AC064807.4-201ENST00000607201 407 ntBASIC2.15□□□□□ -2.07
VPS33AQ96AX1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.15□□□□□ -2.07
VPS33AQ96AX1 AL162373.1-201ENST00000620433 407 ntBASIC2.15□□□□□ -2.07
VPS33AQ96AX1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
VPS33AQ96AX1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.15□□□□□ -2.07
VPS33AQ96AX1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.15□□□□□ -2.07
VPS33AQ96AX1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
VPS33AQ96AX1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.15□□□□□ -2.07
VPS33AQ96AX1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
VPS33AQ96AX1 RNU6-1164P-201ENST00000364428 107 ntBASIC2.14□□□□□ -2.07
VPS33AQ96AX1 Y_RNA.402-201ENST00000383972 102 ntBASIC2.14□□□□□ -2.07
VPS33AQ96AX1 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
VPS33AQ96AX1 U3.40-201ENST00000408706 208 ntBASIC2.14□□□□□ -2.07
VPS33AQ96AX1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS33AQ96AX1 AC012306.1-201ENST00000423267 114 ntBASIC2.14□□□□□ -2.07
VPS33AQ96AX1 AC096920.1-201ENST00000423991 241 ntBASIC2.14□□□□□ -2.07
VPS33AQ96AX1 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.14□□□□□ -2.07
VPS33AQ96AX1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS33AQ96AX1 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.14□□□□□ -2.07
VPS33AQ96AX1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS33AQ96AX1 RNA5SP233-201ENST00000459153 113 ntBASIC2.14□□□□□ -2.07
VPS33AQ96AX1 AC007547.1-201ENST00000462177 490 ntBASIC2.14□□□□□ -2.07
VPS33AQ96AX1 HMGN2P26-201ENST00000463169 339 ntBASIC2.14□□□□□ -2.07
VPS33AQ96AX1 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.14□□□□□ -2.07
VPS33AQ96AX1 AC083904.1-201ENST00000487828 231 ntBASIC2.14□□□□□ -2.07
VPS33AQ96AX1 AC005741.1-201ENST00000511094 432 ntBASIC2.14□□□□□ -2.07
VPS33AQ96AX1 AC092436.3-201ENST00000511788 257 ntBASIC2.14□□□□□ -2.07
VPS33AQ96AX1 RNU6-991P-201ENST00000516168 107 ntBASIC2.14□□□□□ -2.07
VPS33AQ96AX1 Y_RNA.665-201ENST00000516177 98 ntBASIC2.14□□□□□ -2.07
VPS33AQ96AX1 EIF4A1P12-201ENST00000551910 141 ntBASIC2.14□□□□□ -2.07
VPS33AQ96AX1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS33AQ96AX1 AC109446.1-201ENST00000566172 220 ntBASIC2.14□□□□□ -2.07
VPS33AQ96AX1 MIR4287-201ENST00000579398 78 ntBASIC2.14□□□□□ -2.07
VPS33AQ96AX1 MIR4448-201ENST00000584360 86 ntBASIC2.14□□□□□ -2.07
VPS33AQ96AX1 AL109918.3-201ENST00000603072 338 ntBASIC2.14□□□□□ -2.07
VPS33AQ96AX1 AC006023.1-201ENST00000603944 259 ntBASIC2.14□□□□□ -2.07
VPS33AQ96AX1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.14□□□□□ -2.07
VPS33AQ96AX1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VPS33AQ96AX1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VPS33AQ96AX1 ZNF702P-202ENST00000434269 1966 ntBASIC2.13□□□□□ -2.07
VPS33AQ96AX1 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VPS33AQ96AX1 Y_RNA.9-201ENST00000362354 101 ntBASIC2.13□□□□□ -2.07
VPS33AQ96AX1 RNU1-58P-201ENST00000362413 163 ntBASIC2.13□□□□□ -2.07
VPS33AQ96AX1 RNU6-1317P-201ENST00000364582 104 ntBASIC2.13□□□□□ -2.07
VPS33AQ96AX1 Y_RNA.256-201ENST00000364594 104 ntBASIC2.13□□□□□ -2.07
VPS33AQ96AX1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VPS33AQ96AX1 MIR450B-201ENST00000401182 78 ntBASIC2.13□□□□□ -2.07
VPS33AQ96AX1 AL158823.1-201ENST00000418441 478 ntBASIC2.13□□□□□ -2.07
VPS33AQ96AX1 BX510359.4-201ENST00000423750 193 ntBASIC2.13□□□□□ -2.07
VPS33AQ96AX1 AL353689.1-201ENST00000438895 199 ntBASIC2.13□□□□□ -2.07
VPS33AQ96AX1 RPL23AP3-201ENST00000453844 468 ntBASIC2.13□□□□□ -2.07
VPS33AQ96AX1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.13□□□□□ -2.07
VPS33AQ96AX1 MTCO1P29-201ENST00000496868 288 ntBASIC2.13□□□□□ -2.07
VPS33AQ96AX1 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.13□□□□□ -2.07
VPS33AQ96AX1 RNA5SP490-201ENST00000517141 136 ntBASIC2.13□□□□□ -2.07
VPS33AQ96AX1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.13□□□□□ -2.07
VPS33AQ96AX1 HSPE1P18-201ENST00000517602 280 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms