Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC022080.3-201ENST00000544433 482 ntBASIC3.18□□□□□ -1.9
HPS3Q969F9 AC060766.3-201ENST00000591442 263 ntBASIC3.18□□□□□ -1.9
HPS3Q969F9 AL158827.2-201ENST00000602494 330 ntBASIC3.18□□□□□ -1.9
HPS3Q969F9 AL080274.1-201ENST00000605565 220 ntBASIC3.18□□□□□ -1.9
HPS3Q969F9 MIR7106-201ENST00000612419 65 ntBASIC3.18□□□□□ -1.9
HPS3Q969F9 AL691447.3-201ENST00000635020 330 ntBASIC3.18□□□□□ -1.9
HPS3Q969F9 MIR7157-201ENST00000635801 60 ntBASIC3.18□□□□□ -1.9
HPS3Q969F9 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.18□□□□□ -1.9
HPS3Q969F9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
HPS3Q969F9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.17□□□□□ -1.9
HPS3Q969F9 AC009487.2-201ENST00000420969 6821 ntBASIC3.17□□□□□ -1.9
HPS3Q969F9 RNY1P16-201ENST00000363063 111 ntBASIC3.17□□□□□ -1.9
HPS3Q969F9 RNU6-595P-201ENST00000363944 107 ntBASIC3.17□□□□□ -1.9
HPS3Q969F9 Y_RNA.197-201ENST00000364004 102 ntBASIC3.17□□□□□ -1.9
HPS3Q969F9 SNORA18.3-201ENST00000384122 132 ntBASIC3.17□□□□□ -1.9
HPS3Q969F9 AC243428.1-201ENST00000421099 264 ntBASIC3.17□□□□□ -1.9
HPS3Q969F9 AL590135.1-201ENST00000422215 156 ntBASIC3.17□□□□□ -1.9
HPS3Q969F9 AC019205.3-201ENST00000424573 156 ntBASIC3.17□□□□□ -1.9
HPS3Q969F9 AL139132.1-201ENST00000431587 344 ntBASIC3.17□□□□□ -1.9
HPS3Q969F9 MICF-203ENST00000432679 129 ntBASIC3.17□□□□□ -1.9
HPS3Q969F9 AL353997.1-201ENST00000432936 108 ntBASIC3.17□□□□□ -1.9
HPS3Q969F9 AC016700.2-201ENST00000446011 156 ntBASIC3.17□□□□□ -1.9
HPS3Q969F9 RN7SKP210-201ENST00000459176 261 ntBASIC3.17□□□□□ -1.9
HPS3Q969F9 RPL30P1-201ENST00000488676 339 ntBASIC3.17□□□□□ -1.9
HPS3Q969F9 AC096576.1-201ENST00000489014 359 ntBASIC3.17□□□□□ -1.9
HPS3Q969F9 AC015911.1-201ENST00000495111 156 ntBASIC3.17□□□□□ -1.9
HPS3Q969F9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.17□□□□□ -1.9
HPS3Q969F9 AC027176.1-201ENST00000560204 514 ntBASIC3.17□□□□□ -1.9
HPS3Q969F9 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.17□□□□□ -1.9
HPS3Q969F9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
HPS3Q969F9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HPS3Q969F9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.16□□□□□ -1.9
HPS3Q969F9 RNU6-1210P-201ENST00000363775 107 ntBASIC3.16□□□□□ -1.9
HPS3Q969F9 RNU4-9P-201ENST00000364951 139 ntBASIC3.16□□□□□ -1.9
HPS3Q969F9 SNORA44-201ENST00000384584 132 ntBASIC3.16□□□□□ -1.9
HPS3Q969F9 RNU6-700P-201ENST00000391043 107 ntBASIC3.16□□□□□ -1.9
HPS3Q969F9 MIR1302-11-201ENST00000408051 138 ntBASIC3.16□□□□□ -1.9
HPS3Q969F9 MIR1302-9-201ENST00000408365 138 ntBASIC3.16□□□□□ -1.9
HPS3Q969F9 MIR1302-10-201ENST00000408734 138 ntBASIC3.16□□□□□ -1.9
HPS3Q969F9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.16□□□□□ -1.9
HPS3Q969F9 AC007677.1-201ENST00000445757 515 ntBASIC3.16□□□□□ -1.9
HPS3Q969F9 MIR2053-201ENST00000459295 91 ntBASIC3.16□□□□□ -1.9
HPS3Q969F9 RNU6-976P-201ENST00000516086 111 ntBASIC3.16□□□□□ -1.9
HPS3Q969F9 RNU2-53P-201ENST00000516257 147 ntBASIC3.16□□□□□ -1.9
HPS3Q969F9 AL590705.4-201ENST00000532209 134 ntBASIC3.16□□□□□ -1.9
HPS3Q969F9 MRPS36P4-201ENST00000534436 298 ntBASIC3.16□□□□□ -1.9
HPS3Q969F9 MIR5571-201ENST00000577998 113 ntBASIC3.16□□□□□ -1.9
HPS3Q969F9 MIR1302-2-201ENST00000607096 138 ntBASIC3.16□□□□□ -1.9
HPS3Q969F9 AC005014.2-201ENST00000607795 599 ntBASIC3.16□□□□□ -1.9
HPS3Q969F9 AC137590.2-201ENST00000619709 240 ntBASIC3.16□□□□□ -1.9
HPS3Q969F9 SNORA43.4-201ENST00000629559 138 ntBASIC3.16□□□□□ -1.9
HPS3Q969F9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HPS3Q969F9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.15□□□□□ -1.9
HPS3Q969F9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
HPS3Q969F9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
HPS3Q969F9 AC092593.1-201ENST00000515413 1815 ntBASIC3.15□□□□□ -1.91
HPS3Q969F9 MIR369-201ENST00000362155 70 ntBASIC3.15□□□□□ -1.91
HPS3Q969F9 SNORA9.2-201ENST00000365361 133 ntBASIC3.15□□□□□ -1.91
HPS3Q969F9 SNORD42.2-201ENST00000365570 69 ntBASIC3.15□□□□□ -1.91
HPS3Q969F9 SNORA29-201ENST00000384183 140 ntBASIC3.15□□□□□ -1.91
HPS3Q969F9 MTCYBP2-201ENST00000407745 171 ntBASIC3.15□□□□□ -1.91
HPS3Q969F9 EEF1A1P41-201ENST00000414667 207 ntBASIC3.15□□□□□ -1.91
HPS3Q969F9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HPS3Q969F9 Y_RNA.639-201ENST00000458981 102 ntBASIC3.15□□□□□ -1.91
HPS3Q969F9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.15□□□□□ -1.91
HPS3Q969F9 AC090525.1-201ENST00000479116 478 ntBASIC3.15□□□□□ -1.91
HPS3Q969F9 AC091826.1-201ENST00000514065 313 ntBASIC3.15□□□□□ -1.91
HPS3Q969F9 RNU7-175P-201ENST00000515915 61 ntBASIC3.15□□□□□ -1.91
HPS3Q969F9 COX6CP5-201ENST00000527162 228 ntBASIC3.15□□□□□ -1.91
HPS3Q969F9 HSPE1P20-201ENST00000538133 289 ntBASIC3.15□□□□□ -1.91
HPS3Q969F9 SUB1P3-201ENST00000564581 315 ntBASIC3.15□□□□□ -1.91
HPS3Q969F9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.15□□□□□ -1.91
HPS3Q969F9 SNORD98-201ENST00000636377 67 ntBASIC3.15□□□□□ -1.91
HPS3Q969F9 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HPS3Q969F9 AC000403.1-201ENST00000613696 3585 ntBASIC3.14□□□□□ -1.91
HPS3Q969F9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HPS3Q969F9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HPS3Q969F9 RNU6-1159P-201ENST00000362933 107 ntBASIC3.14□□□□□ -1.91
HPS3Q969F9 Y_RNA.128-201ENST00000363391 112 ntBASIC3.14□□□□□ -1.91
HPS3Q969F9 MIR512-1-201ENST00000384913 84 ntBASIC3.14□□□□□ -1.91
HPS3Q969F9 SNORA26.3-201ENST00000391119 136 ntBASIC3.14□□□□□ -1.91
HPS3Q969F9 MIR887-201ENST00000401258 79 ntBASIC3.14□□□□□ -1.91
HPS3Q969F9 RNA5SP494-201ENST00000410653 129 ntBASIC3.14□□□□□ -1.91
HPS3Q969F9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.14□□□□□ -1.91
HPS3Q969F9 EIF4EP4-201ENST00000424916 578 ntBASIC3.14□□□□□ -1.91
HPS3Q969F9 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.14□□□□□ -1.91
HPS3Q969F9 AC005534.2-201ENST00000431047 433 ntBASIC3.14□□□□□ -1.91
HPS3Q969F9 AC003982.1-202ENST00000469928 248 ntBASIC3.14□□□□□ -1.91
HPS3Q969F9 AL121594.1-201ENST00000475906 575 ntBASIC3.14□□□□□ -1.91
HPS3Q969F9 RPL30P10-201ENST00000488148 337 ntBASIC3.14□□□□□ -1.91
HPS3Q969F9 HMGB1P35-201ENST00000503360 598 ntBASIC3.14□□□□□ -1.91
HPS3Q969F9 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.14□□□□□ -1.91
HPS3Q969F9 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.14□□□□□ -1.91
HPS3Q969F9 RNU5F-2P-201ENST00000516066 82 ntBASIC3.14□□□□□ -1.91
HPS3Q969F9 SCARNA3-201ENST00000517097 143 ntBASIC3.14□□□□□ -1.91
HPS3Q969F9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.14□□□□□ -1.91
HPS3Q969F9 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.14□□□□□ -1.91
HPS3Q969F9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HPS3Q969F9 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.14□□□□□ -1.91
HPS3Q969F9 AL670379.2-201ENST00000604983 252 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms