Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 USP9YP21-201ENST00000420603 432 ntBASIC0.36□□□□□ -2.35
AP3S1Q92572 AC114737.2-201ENST00000421583 173 ntBASIC0.36□□□□□ -2.35
AP3S1Q92572 AC011233.1-201ENST00000422812 283 ntBASIC0.36□□□□□ -2.35
AP3S1Q92572 RPL23AP30-201ENST00000432419 501 ntBASIC0.36□□□□□ -2.35
AP3S1Q92572 AL358794.1-201ENST00000445689 381 ntBASIC0.36□□□□□ -2.35
AP3S1Q92572 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.36□□□□□ -2.35
AP3S1Q92572 RNU7-14P-201ENST00000459331 62 ntBASIC0.36□□□□□ -2.35
AP3S1Q92572 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.36□□□□□ -2.35
AP3S1Q92572 RNU6-856P-201ENST00000516959 98 ntBASIC0.36□□□□□ -2.35
AP3S1Q92572 AL513534.2-201ENST00000603836 250 ntBASIC0.36□□□□□ -2.35
AP3S1Q92572 AL031281.1-201ENST00000604049 488 ntBASIC0.36□□□□□ -2.35
AP3S1Q92572 AC104073.3-201ENST00000610942 955 ntBASIC0.36□□□□□ -2.35
AP3S1Q92572 AL359547.2-201ENST00000615810 418 ntBASIC0.36□□□□□ -2.35
AP3S1Q92572 RNU6-945P-201ENST00000383947 107 ntBASIC0.35□□□□□ -2.35
AP3S1Q92572 RNU6-224P-201ENST00000384055 107 ntBASIC0.35□□□□□ -2.35
AP3S1Q92572 RNU6-17P-201ENST00000384245 107 ntBASIC0.35□□□□□ -2.35
AP3S1Q92572 RNU6-18P-201ENST00000384527 107 ntBASIC0.35□□□□□ -2.35
AP3S1Q92572 RPL23AP95-201ENST00000426806 265 ntBASIC0.35□□□□□ -2.35
AP3S1Q92572 HMGN1P12-201ENST00000499125 195 ntBASIC0.35□□□□□ -2.35
AP3S1Q92572 AC104806.1-201ENST00000508720 308 ntBASIC0.35□□□□□ -2.35
AP3S1Q92572 TRMT112P2-201ENST00000512910 132 ntBASIC0.35□□□□□ -2.35
AP3S1Q92572 AL596327.1-201ENST00000603629 213 ntBASIC0.35□□□□□ -2.35
AP3S1Q92572 AC021506.2-201ENST00000612354 169 ntBASIC0.35□□□□□ -2.35
AP3S1Q92572 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.35□□□□□ -2.35
AP3S1Q92572 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.35□□□□□ -2.35
AP3S1Q92572 AC103706.2-201ENST00000638080 240 ntBASIC0.35□□□□□ -2.35
AP3S1Q92572 Y_RNA.363-201ENST00000365529 113 ntBASIC0.34□□□□□ -2.36
AP3S1Q92572 RNU6-950P-201ENST00000384651 107 ntBASIC0.34□□□□□ -2.36
AP3S1Q92572 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.34□□□□□ -2.36
AP3S1Q92572 MTND1P18-201ENST00000448191 573 ntBASIC0.34□□□□□ -2.36
AP3S1Q92572 GAPDHP17-201ENST00000449858 1001 ntBASIC0.34□□□□□ -2.36
AP3S1Q92572 AC091435.1-201ENST00000505442 584 ntBASIC0.34□□□□□ -2.36
AP3S1Q92572 AC105758.1-201ENST00000506038 399 ntBASIC0.34□□□□□ -2.36
AP3S1Q92572 AF131216.2-201ENST00000512316 564 ntBASIC0.34□□□□□ -2.36
AP3S1Q92572 RNU5F-4P-201ENST00000516581 114 ntBASIC0.34□□□□□ -2.36
AP3S1Q92572 DEFB108E-201ENST00000524692 240 ntBASIC0.34□□□□□ -2.36
AP3S1Q92572 AP001893.2-201ENST00000526949 202 ntBASIC0.34□□□□□ -2.36
AP3S1Q92572 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.34□□□□□ -2.36
AP3S1Q92572 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.34□□□□□ -2.36
AP3S1Q92572 MIR4742-201ENST00000581069 85 ntBASIC0.34□□□□□ -2.36
AP3S1Q92572 AC012507.3-201ENST00000603556 477 ntBASIC0.34□□□□□ -2.36
AP3S1Q92572 MTND4P14-201ENST00000435799 1354 ntBASIC0.33□□□□□ -2.36
AP3S1Q92572 RNY1P10-201ENST00000363268 113 ntBASIC0.33□□□□□ -2.36
AP3S1Q92572 RNU6-527P-201ENST00000363425 104 ntBASIC0.33□□□□□ -2.36
AP3S1Q92572 RNU4-56P-201ENST00000364700 142 ntBASIC0.33□□□□□ -2.36
AP3S1Q92572 RNU5E-7P-201ENST00000365290 117 ntBASIC0.33□□□□□ -2.36
AP3S1Q92572 SNORA50A-201ENST00000384225 134 ntBASIC0.33□□□□□ -2.36
AP3S1Q92572 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.33□□□□□ -2.36
AP3S1Q92572 AC244023.1-201ENST00000426884 112 ntBASIC0.33□□□□□ -2.36
AP3S1Q92572 AL162395.1-201ENST00000457882 422 ntBASIC0.33□□□□□ -2.36
AP3S1Q92572 AC092991.1-201ENST00000477176 376 ntBASIC0.33□□□□□ -2.36
AP3S1Q92572 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.33□□□□□ -2.36
AP3S1Q92572 AC011406.1-201ENST00000512440 370 ntBASIC0.33□□□□□ -2.36
AP3S1Q92572 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
AP3S1Q92572 RNU6-1098P-201ENST00000516772 96 ntBASIC0.33□□□□□ -2.36
AP3S1Q92572 HSPE1P4-201ENST00000550617 308 ntBASIC0.33□□□□□ -2.36
AP3S1Q92572 CYP3A137P-201ENST00000562436 69 ntBASIC0.33□□□□□ -2.36
AP3S1Q92572 Z83818.1-201ENST00000603584 150 ntBASIC0.33□□□□□ -2.36
AP3S1Q92572 AC242498.1-201ENST00000604134 111 ntBASIC0.33□□□□□ -2.36
AP3S1Q92572 AC243994.1-201ENST00000618627 109 ntBASIC0.33□□□□□ -2.36
AP3S1Q92572 ELL2P3-201ENST00000457883 1602 ntBASIC0.33□□□□□ -2.36
AP3S1Q92572 AL442644.1-201ENST00000454390 3105 ntBASIC0.32□□□□□ -2.36
AP3S1Q92572 AC134026.1-201ENST00000623249 2239 ntBASIC0.32□□□□□ -2.36
AP3S1Q92572 RNU6-1026P-201ENST00000384465 108 ntBASIC0.32□□□□□ -2.36
AP3S1Q92572 RNU6-1245P-201ENST00000411130 106 ntBASIC0.32□□□□□ -2.36
AP3S1Q92572 AC005840.1-201ENST00000498412 377 ntBASIC0.32□□□□□ -2.36
AP3S1Q92572 RNA5SP384-201ENST00000516615 116 ntBASIC0.32□□□□□ -2.36
AP3S1Q92572 RNU6-922P-201ENST00000516753 99 ntBASIC0.32□□□□□ -2.36
AP3S1Q92572 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.32□□□□□ -2.36
AP3S1Q92572 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.32□□□□□ -2.36
AP3S1Q92572 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.32□□□□□ -2.36
AP3S1Q92572 AC021231.3-201ENST00000558497 370 ntBASIC0.32□□□□□ -2.36
AP3S1Q92572 AC090888.2-201ENST00000559765 1144 ntBASIC0.32□□□□□ -2.36
AP3S1Q92572 AP001542.1-201ENST00000591314 200 ntBASIC0.32□□□□□ -2.36
AP3S1Q92572 DEFB131E-202ENST00000602581 683 ntBASIC0.32□□□□□ -2.36
AP3S1Q92572 CTHRC1P1-201ENST00000605383 469 ntBASIC0.32□□□□□ -2.36
AP3S1Q92572 AC012557.2-201ENST00000605919 418 ntBASIC0.32□□□□□ -2.36
AP3S1Q92572 GHRLOS.1-201ENST00000610995 70 ntBASIC0.32□□□□□ -2.36
AP3S1Q92572 AL354696.1-201ENST00000614652 497 ntBASIC0.32□□□□□ -2.36
AP3S1Q92572 MIR6767-201ENST00000637302 66 ntBASIC0.32□□□□□ -2.36
AP3S1Q92572 RNA5SP347-201ENST00000362445 119 ntBASIC0.31□□□□□ -2.36
AP3S1Q92572 Y_RNA.132-201ENST00000363421 102 ntBASIC0.31□□□□□ -2.36
AP3S1Q92572 U3.8-201ENST00000363675 217 ntBASIC0.31□□□□□ -2.36
AP3S1Q92572 RNU6-560P-201ENST00000364007 108 ntBASIC0.31□□□□□ -2.36
AP3S1Q92572 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.31□□□□□ -2.36
AP3S1Q92572 AL035398.1-201ENST00000430869 322 ntBASIC0.31□□□□□ -2.36
AP3S1Q92572 FABP5P4-201ENST00000437203 171 ntBASIC0.31□□□□□ -2.36
AP3S1Q92572 AC073614.1-201ENST00000438690 650 ntBASIC0.31□□□□□ -2.36
AP3S1Q92572 AC034244.1-201ENST00000507687 207 ntBASIC0.31□□□□□ -2.36
AP3S1Q92572 RNU2-10P-201ENST00000516375 211 ntBASIC0.31□□□□□ -2.36
AP3S1Q92572 AC087883.1-201ENST00000551882 391 ntBASIC0.31□□□□□ -2.36
AP3S1Q92572 AC008015.1-201ENST00000555505 465 ntBASIC0.31□□□□□ -2.36
AP3S1Q92572 MIR4498-201ENST00000577599 66 ntBASIC0.31□□□□□ -2.36
AP3S1Q92572 MIR5695-201ENST00000579717 85 ntBASIC0.31□□□□□ -2.36
AP3S1Q92572 MTATP6P2-201ENST00000603319 678 ntBASIC0.31□□□□□ -2.36
AP3S1Q92572 AC068880.4-201ENST00000623082 495 ntBASIC0.31□□□□□ -2.36
AP3S1Q92572 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.3□□□□□ -2.36
AP3S1Q92572 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
AP3S1Q92572 U3.9-201ENST00000363823 204 ntBASIC0.3□□□□□ -2.36
AP3S1Q92572 RNU6-877P-201ENST00000383868 107 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms