Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.59□□□□□ -1.83
RTF1Q92541 RPS26P21-201ENST00000475397 348 ntBASIC3.59□□□□□ -1.83
RTF1Q92541 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.59□□□□□ -1.83
RTF1Q92541 SNORA40.14-201ENST00000516543 86 ntBASIC3.59□□□□□ -1.83
RTF1Q92541 AC144568.1-201ENST00000520139 137 ntBASIC3.59□□□□□ -1.83
RTF1Q92541 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.59□□□□□ -1.83
RTF1Q92541 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.59□□□□□ -1.83
RTF1Q92541 AC241585.2-209ENST00000638217 143 ntBASIC3.59□□□□□ -1.83
RTF1Q92541 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.59□□□□□ -1.84
RTF1Q92541 FAM35CP-201ENST00000554755 2470 ntBASIC3.59□□□□□ -1.84
RTF1Q92541 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RTF1Q92541 AL136360.1-201ENST00000503377 1900 ntBASIC3.58□□□□□ -1.84
RTF1Q92541 AC010680.1-201ENST00000590024 3590 ntBASIC3.58□□□□□ -1.84
RTF1Q92541 RNU4-42P-201ENST00000364738 142 ntBASIC3.58□□□□□ -1.84
RTF1Q92541 SNORD116-20-201ENST00000384529 92 ntBASIC3.58□□□□□ -1.84
RTF1Q92541 MIR181A2-201ENST00000384863 110 ntBASIC3.58□□□□□ -1.84
RTF1Q92541 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RTF1Q92541 RNU6-1245P-201ENST00000411130 106 ntBASIC3.58□□□□□ -1.84
RTF1Q92541 AL451074.5-201ENST00000415894 435 ntBASIC3.58□□□□□ -1.84
RTF1Q92541 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.58□□□□□ -1.84
RTF1Q92541 ARL5AP4-201ENST00000430731 512 ntBASIC3.58□□□□□ -1.84
RTF1Q92541 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RTF1Q92541 AL714022.1-201ENST00000439897 151 ntBASIC3.58□□□□□ -1.84
RTF1Q92541 AL353752.1-201ENST00000454946 260 ntBASIC3.58□□□□□ -1.84
RTF1Q92541 RN7SKP210-201ENST00000459176 261 ntBASIC3.58□□□□□ -1.84
RTF1Q92541 AC003982.1-202ENST00000469928 248 ntBASIC3.58□□□□□ -1.84
RTF1Q92541 AP004217.1-201ENST00000480579 346 ntBASIC3.58□□□□□ -1.84
RTF1Q92541 MRPL42P6-201ENST00000486397 371 ntBASIC3.58□□□□□ -1.84
RTF1Q92541 RPL23AP94-201ENST00000512518 302 ntBASIC3.58□□□□□ -1.84
RTF1Q92541 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.58□□□□□ -1.84
RTF1Q92541 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.58□□□□□ -1.84
RTF1Q92541 AC016727.2-201ENST00000603988 621 ntBASIC3.58□□□□□ -1.84
RTF1Q92541 AL356157.2-201ENST00000605122 111 ntBASIC3.58□□□□□ -1.84
RTF1Q92541 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.58□□□□□ -1.84
RTF1Q92541 AC024581.2-201ENST00000619986 252 ntBASIC3.58□□□□□ -1.84
RTF1Q92541 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.58□□□□□ -1.84
RTF1Q92541 ADAM3A-203ENST00000461344 2157 ntBASIC3.58□□□□□ -1.84
RTF1Q92541 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RTF1Q92541 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.57□□□□□ -1.84
RTF1Q92541 Y_RNA.123-201ENST00000363338 102 ntBASIC3.57□□□□□ -1.84
RTF1Q92541 FTH1P15-201ENST00000406984 280 ntBASIC3.57□□□□□ -1.84
RTF1Q92541 AC074117.2-201ENST00000417130 397 ntBASIC3.57□□□□□ -1.84
RTF1Q92541 AC091812.1-201ENST00000432235 1948 ntBASIC3.57□□□□□ -1.84
RTF1Q92541 HAUS6P2-201ENST00000433254 2404 ntBASIC3.57□□□□□ -1.84
RTF1Q92541 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.57□□□□□ -1.84
RTF1Q92541 AC243964.1-201ENST00000441814 261 ntBASIC3.57□□□□□ -1.84
RTF1Q92541 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.57□□□□□ -1.84
RTF1Q92541 RNA5SP385-201ENST00000515947 110 ntBASIC3.57□□□□□ -1.84
RTF1Q92541 AC022616.4-201ENST00000522985 181 ntBASIC3.57□□□□□ -1.84
RTF1Q92541 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.57□□□□□ -1.84
RTF1Q92541 AL590705.4-201ENST00000532209 134 ntBASIC3.57□□□□□ -1.84
RTF1Q92541 AC006199.1-201ENST00000548728 219 ntBASIC3.57□□□□□ -1.84
RTF1Q92541 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.57□□□□□ -1.84
RTF1Q92541 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.57□□□□□ -1.84
RTF1Q92541 AC113195.1-201ENST00000579952 141 ntBASIC3.57□□□□□ -1.84
RTF1Q92541 HMGN2P15-201ENST00000585707 270 ntBASIC3.57□□□□□ -1.84
RTF1Q92541 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.57□□□□□ -1.84
RTF1Q92541 AC068831.7-201ENST00000616954 363 ntBASIC3.57□□□□□ -1.84
RTF1Q92541 AC138305.3-201ENST00000624988 240 ntBASIC3.57□□□□□ -1.84
RTF1Q92541 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RTF1Q92541 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.56□□□□□ -1.84
RTF1Q92541 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RTF1Q92541 SNORA51.4-201ENST00000364993 124 ntBASIC3.56□□□□□ -1.84
RTF1Q92541 Y_RNA.389-201ENST00000383924 113 ntBASIC3.56□□□□□ -1.84
RTF1Q92541 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
RTF1Q92541 AL031121.1-201ENST00000406553 254 ntBASIC3.56□□□□□ -1.84
RTF1Q92541 SNORA11.2-201ENST00000408318 127 ntBASIC3.56□□□□□ -1.84
RTF1Q92541 RNU6-101P-201ENST00000410323 104 ntBASIC3.56□□□□□ -1.84
RTF1Q92541 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.56□□□□□ -1.84
RTF1Q92541 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.56□□□□□ -1.84
RTF1Q92541 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.56□□□□□ -1.84
RTF1Q92541 AL513124.1-201ENST00000450410 614 ntBASIC3.56□□□□□ -1.84
RTF1Q92541 AC010099.1-201ENST00000455434 375 ntBASIC3.56□□□□□ -1.84
RTF1Q92541 AC093852.1-201ENST00000503587 266 ntBASIC3.56□□□□□ -1.84
RTF1Q92541 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.56□□□□□ -1.84
RTF1Q92541 RNU6-711P-201ENST00000517255 106 ntBASIC3.56□□□□□ -1.84
RTF1Q92541 HSBP1P1-201ENST00000555205 166 ntBASIC3.56□□□□□ -1.84
RTF1Q92541 AC009163.5-201ENST00000575421 637 ntBASIC3.56□□□□□ -1.84
RTF1Q92541 7SK.10-201ENST00000621414 298 ntBASIC3.56□□□□□ -1.84
RTF1Q92541 AC097372.5-201ENST00000623665 376 ntBASIC3.56□□□□□ -1.84
RTF1Q92541 MIR3199-2-201ENST00000636243 86 ntBASIC3.56□□□□□ -1.84
RTF1Q92541 AC103988.1-201ENST00000566382 2177 ntBASIC3.56□□□□□ -1.84
RTF1Q92541 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.55□□□□□ -1.84
RTF1Q92541 Y_RNA.380-201ENST00000365663 111 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 Y_RNA.424-201ENST00000384063 103 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 Y_RNA.485-201ENST00000384395 102 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RTF1Q92541 RNU6-823P-201ENST00000391042 103 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 RNA5SP38-201ENST00000410750 119 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 HMGB3P2-201ENST00000411913 584 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.55□□□□□ -1.84
RTF1Q92541 AC096644.2-201ENST00000429278 159 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 MTCYBP9-201ENST00000431021 303 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 AC007969.2-201ENST00000441891 191 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 CHEK2P4-201ENST00000450340 246 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 RNU7-23P-201ENST00000459465 62 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 MED28P2-201ENST00000475771 317 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.55□□□□□ -1.84
RTF1Q92541 MTCO2P24-201ENST00000515611 426 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 RNU6-911P-201ENST00000516523 104 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms