Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC016256.1-201ENST00000547971 354 ntBASIC2.8□□□□□ -1.96
HMGB4Q8WW32 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGB4Q8WW32 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.8□□□□□ -1.96
HMGB4Q8WW32 AC060766.3-201ENST00000591442 263 ntBASIC2.8□□□□□ -1.96
HMGB4Q8WW32 HMGB1P24-202ENST00000615653 685 ntBASIC2.8□□□□□ -1.96
HMGB4Q8WW32 AL359314.1-201ENST00000616913 261 ntBASIC2.8□□□□□ -1.96
HMGB4Q8WW32 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.8□□□□□ -1.96
HMGB4Q8WW32 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.79□□□□□ -1.96
HMGB4Q8WW32 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
HMGB4Q8WW32 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HMGB4Q8WW32 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
HMGB4Q8WW32 RNU1-72P-201ENST00000362976 153 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 RNU6-1210P-201ENST00000363775 107 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 RNU6-1286P-201ENST00000383871 107 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 RNU6-331P-201ENST00000384724 107 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 MIR218-1-201ENST00000384999 110 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 MIR9-1-201ENST00000385198 89 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 U6atac.2-201ENST00000408644 118 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGB4Q8WW32 AC244505.4-201ENST00000434905 287 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 SSXP5-201ENST00000443473 287 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 UQCRHP3-201ENST00000451503 251 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.79□□□□□ -1.96
HMGB4Q8WW32 TRBV12-1-201ENST00000479785 344 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGB4Q8WW32 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.79□□□□□ -1.96
HMGB4Q8WW32 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGB4Q8WW32 AC022447.4-201ENST00000504053 364 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.79□□□□□ -1.96
HMGB4Q8WW32 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.79□□□□□ -1.96
HMGB4Q8WW32 MRPS36P4-201ENST00000534436 298 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 AC007375.1-201ENST00000554513 578 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 MIR5571-201ENST00000577998 113 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 AL158827.2-201ENST00000602494 330 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 AL050343.2-201ENST00000607338 280 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 AL359198.2-201ENST00000611836 194 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 AC084781.2-201ENST00000615568 161 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 MIR6715A-201ENST00000615929 79 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 AC126177.8-201ENST00000618339 1015 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 AL691447.3-201ENST00000635020 330 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 AC008264.2-201ENST00000610193 3731 ntBASIC2.79□□□□□ -1.96
HMGB4Q8WW32 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HMGB4Q8WW32 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
HMGB4Q8WW32 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HMGB4Q8WW32 SET-203ENST00000372688 801 ntTSL 2 BASIC2.78□□□□□ -1.96
HMGB4Q8WW32 RNU6-142P-201ENST00000384019 107 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 RNU6-968P-201ENST00000384076 107 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 Y_RNA.533-201ENST00000384596 114 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 SNORA46-201ENST00000384762 135 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 CBX3P9-201ENST00000402326 552 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 RNA5SP21-201ENST00000410917 96 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 GPM6BP3-201ENST00000442797 145 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.78□□□□□ -1.96
HMGB4Q8WW32 Z96811.1-201ENST00000445880 108 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 AL513124.1-201ENST00000450410 614 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 RPL30P15-201ENST00000457129 321 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 RPL23AP70-201ENST00000483361 460 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 HMGB1P35-201ENST00000503360 598 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.78□□□□□ -1.96
HMGB4Q8WW32 SCARNA16.2-201ENST00000516520 172 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 SNORA31.16-201ENST00000516773 139 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 CBX3P8-201ENST00000532412 525 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 AC091544.4-201ENST00000555268 342 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 AC021231.3-201ENST00000558497 370 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 AC027176.1-201ENST00000560204 514 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 AC105245.1-201ENST00000581934 244 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 MIR3136-201ENST00000583498 78 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 AL133255.1-201ENST00000606374 441 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 AC092608.2-201ENST00000624427 218 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.78□□□□□ -1.96
HMGB4Q8WW32 AC243829.7-201ENST00000633081 225 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 SNORD98-201ENST00000636377 67 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.78□□□□□ -1.96
HMGB4Q8WW32 AC026241.1-201ENST00000517873 2142 ntBASIC2.78□□□□□ -1.96
HMGB4Q8WW32 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.78□□□□□ -1.96
HMGB4Q8WW32 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
HMGB4Q8WW32 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
HMGB4Q8WW32 AC006026.1-201ENST00000444025 1803 ntBASIC2.77□□□□□ -1.97
HMGB4Q8WW32 SNORA29-201ENST00000384183 140 ntBASIC2.77□□□□□ -1.97
HMGB4Q8WW32 SNORA36A-201ENST00000384221 132 ntBASIC2.77□□□□□ -1.97
HMGB4Q8WW32 MIR512-1-201ENST00000384913 84 ntBASIC2.77□□□□□ -1.97
HMGB4Q8WW32 MIR627-201ENST00000384979 97 ntBASIC2.77□□□□□ -1.97
HMGB4Q8WW32 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
HMGB4Q8WW32 SNORA75.6-201ENST00000391318 127 ntBASIC2.77□□□□□ -1.97
HMGB4Q8WW32 AC243428.1-201ENST00000421099 264 ntBASIC2.77□□□□□ -1.97
HMGB4Q8WW32 AL590135.1-201ENST00000422215 156 ntBASIC2.77□□□□□ -1.97
HMGB4Q8WW32 AC019205.3-201ENST00000424573 156 ntBASIC2.77□□□□□ -1.97
HMGB4Q8WW32 MTND4P28-201ENST00000426217 387 ntBASIC2.77□□□□□ -1.97
HMGB4Q8WW32 SAR1AP4-201ENST00000429225 591 ntBASIC2.77□□□□□ -1.97
HMGB4Q8WW32 AC016700.2-201ENST00000446011 156 ntBASIC2.77□□□□□ -1.97
HMGB4Q8WW32 AC080013.2-201ENST00000460866 323 ntBASIC2.77□□□□□ -1.97
HMGB4Q8WW32 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.77□□□□□ -1.97
HMGB4Q8WW32 AC090525.1-201ENST00000479116 478 ntBASIC2.77□□□□□ -1.97
HMGB4Q8WW32 AC015911.1-201ENST00000495111 156 ntBASIC2.77□□□□□ -1.97
HMGB4Q8WW32 AC005899.2-201ENST00000584353 90 ntBASIC2.77□□□□□ -1.97
HMGB4Q8WW32 AC104984.5-201ENST00000586878 94 ntBASIC2.77□□□□□ -1.97
HMGB4Q8WW32 AL078605.1-201ENST00000603529 500 ntBASIC2.77□□□□□ -1.97
HMGB4Q8WW32 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.77□□□□□ -1.97
HMGB4Q8WW32 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms