Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 AL137159.1-201ENST00000452808 512 ntBASIC1.41□□□□□ -2.18
LINC01560Q8TB33 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.41□□□□□ -2.18
LINC01560Q8TB33 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.41□□□□□ -2.18
LINC01560Q8TB33 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.41□□□□□ -2.18
LINC01560Q8TB33 AC087884.1-201ENST00000469738 328 ntBASIC1.41□□□□□ -2.18
LINC01560Q8TB33 RPS3AP17-201ENST00000472594 777 ntBASIC1.41□□□□□ -2.18
LINC01560Q8TB33 CCDC34P1-201ENST00000507441 517 ntBASIC1.41□□□□□ -2.18
LINC01560Q8TB33 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.41□□□□□ -2.18
LINC01560Q8TB33 AC009646.1-201ENST00000510455 318 ntBASIC1.41□□□□□ -2.18
LINC01560Q8TB33 AC091133.4-201ENST00000511142 308 ntBASIC1.41□□□□□ -2.18
LINC01560Q8TB33 AP001893.2-201ENST00000526949 202 ntBASIC1.41□□□□□ -2.18
LINC01560Q8TB33 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.41□□□□□ -2.18
LINC01560Q8TB33 CBX3P4-201ENST00000538909 354 ntBASIC1.41□□□□□ -2.18
LINC01560Q8TB33 AC103987.3-201ENST00000582071 292 ntBASIC1.41□□□□□ -2.18
LINC01560Q8TB33 SNRPGP17-201ENST00000603780 214 ntBASIC1.41□□□□□ -2.18
LINC01560Q8TB33 BX248123.2-201ENST00000606318 124 ntBASIC1.41□□□□□ -2.18
LINC01560Q8TB33 AC007684.1-201ENST00000609671 477 ntBASIC1.41□□□□□ -2.18
LINC01560Q8TB33 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.41□□□□□ -2.18
LINC01560Q8TB33 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.41□□□□□ -2.18
LINC01560Q8TB33 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
LINC01560Q8TB33 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
LINC01560Q8TB33 AC009487.4-201ENST00000624969 3585 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
LINC01560Q8TB33 Y_RNA.1-201ENST00000352915 104 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 RNU6-60P-201ENST00000364792 103 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 RNU6-1119P-201ENST00000384349 108 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 MIR17-201ENST00000385012 84 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 MIR29B2-201ENST00000385055 81 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 Y_RNA.597-201ENST00000410463 100 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 RNA5SP450-201ENST00000411206 102 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 AL356379.1-201ENST00000414105 126 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.4□□□□□ -2.19
LINC01560Q8TB33 IFNA20P-201ENST00000436840 528 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 AC092473.1-201ENST00000441098 221 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 GPM6BP3-201ENST00000442797 145 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 AL031274.1-201ENST00000450334 232 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC01560Q8TB33 RNU7-167P-201ENST00000459160 62 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.4□□□□□ -2.19
LINC01560Q8TB33 AL163973.1-201ENST00000484753 577 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 HMGB1P29-201ENST00000505659 499 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 MTND2P33-201ENST00000506452 1031 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 AC010493.1-201ENST00000513479 292 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.4□□□□□ -2.19
LINC01560Q8TB33 RNA5SP364-201ENST00000516938 78 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 AC109479.2-201ENST00000517842 174 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 MTND2P38-201ENST00000522536 667 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC01560Q8TB33 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC01560Q8TB33 AC022616.8-201ENST00000533569 253 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 AC018630.3-201ENST00000542637 96 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 AC015720.1-201ENST00000565251 277 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 MIR4529-201ENST00000578110 78 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 MTND1P15-201ENST00000579262 949 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 MIR3935-201ENST00000583472 104 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 MIR3611-201ENST00000584484 83 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 AC007229.1-201ENST00000590455 412 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 AC091805.2-201ENST00000603848 235 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 AC107304.1-201ENST00000604229 296 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.4□□□□□ -2.19
LINC01560Q8TB33 AL354950.2-201ENST00000617939 290 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 AL162373.1-201ENST00000620433 407 ntBASIC1.4□□□□□ -2.19
LINC01560Q8TB33 MTND4P14-201ENST00000435799 1354 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 RNA5SP276-201ENST00000362580 94 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 SNORD115-3-201ENST00000363100 82 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 Y_RNA.296-201ENST00000364930 108 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 RNU6-827P-201ENST00000365553 106 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 RNU6-611P-201ENST00000384276 104 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 RNU6-43P-201ENST00000384302 107 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 Y_RNA.582-201ENST00000391023 95 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 SUMO2P12-201ENST00000405924 140 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 RNU6-1245P-201ENST00000411130 106 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 HMGN2P19-201ENST00000425149 265 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.39□□□□□ -2.19
LINC01560Q8TB33 AL606489.2-201ENST00000433886 234 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 PSPHP1-201ENST00000450062 261 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.39□□□□□ -2.19
LINC01560Q8TB33 PRELID3BP1-201ENST00000457142 540 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 SNRPGP7-201ENST00000469016 106 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.39□□□□□ -2.19
LINC01560Q8TB33 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
LINC01560Q8TB33 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.39□□□□□ -2.19
LINC01560Q8TB33 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 COPS8P3-201ENST00000526024 482 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 AC103996.1-201ENST00000555468 102 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.39□□□□□ -2.19
LINC01560Q8TB33 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.39□□□□□ -2.19
LINC01560Q8TB33 AC026271.5-201ENST00000577873 130 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 MIR4424-201ENST00000585257 86 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 BNIP3P16-201ENST00000589779 534 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 HULC.1-201ENST00000612720 240 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 AL359314.1-201ENST00000616913 261 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 MIR1248-201ENST00000629190 106 ntBASIC1.39□□□□□ -2.19
LINC01560Q8TB33 ZNF702P-202ENST00000434269 1966 ntBASIC1.38□□□□□ -2.19
LINC01560Q8TB33 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
LINC01560Q8TB33 RNU4-15P-201ENST00000362613 141 ntBASIC1.38□□□□□ -2.19
LINC01560Q8TB33 RNY1P10-201ENST00000363268 113 ntBASIC1.38□□□□□ -2.19
LINC01560Q8TB33 RNU6-743P-201ENST00000364151 106 ntBASIC1.38□□□□□ -2.19
LINC01560Q8TB33 SNORD32A-201ENST00000364805 84 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 321.1 ms