Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
LMO3Q8TAP4 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.66□□□□□ -1.98
LMO3Q8TAP4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
LMO3Q8TAP4 ZNF299P-201ENST00000406845 1804 ntBASIC2.66□□□□□ -1.98
LMO3Q8TAP4 RNU6-140P-201ENST00000384566 108 ntBASIC2.66□□□□□ -1.98
LMO3Q8TAP4 RNU6-1197P-201ENST00000391183 107 ntBASIC2.66□□□□□ -1.98
LMO3Q8TAP4 Y_RNA.618-201ENST00000410949 107 ntBASIC2.66□□□□□ -1.98
LMO3Q8TAP4 AC098614.2-201ENST00000426040 255 ntBASIC2.66□□□□□ -1.98
LMO3Q8TAP4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.66□□□□□ -1.98
LMO3Q8TAP4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.66□□□□□ -1.98
LMO3Q8TAP4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.66□□□□□ -1.98
LMO3Q8TAP4 AL078601.1-201ENST00000444542 271 ntBASIC2.66□□□□□ -1.98
LMO3Q8TAP4 AP001486.1-201ENST00000463339 476 ntBASIC2.66□□□□□ -1.98
LMO3Q8TAP4 RPL22P13-201ENST00000493291 347 ntBASIC2.66□□□□□ -1.98
LMO3Q8TAP4 MTND4LP22-201ENST00000508209 276 ntBASIC2.66□□□□□ -1.98
LMO3Q8TAP4 MRPS35P2-201ENST00000508242 191 ntBASIC2.66□□□□□ -1.98
LMO3Q8TAP4 RNU7-4P-201ENST00000516961 62 ntBASIC2.66□□□□□ -1.98
LMO3Q8TAP4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.66□□□□□ -1.98
LMO3Q8TAP4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.66□□□□□ -1.98
LMO3Q8TAP4 MYL12BP1-201ENST00000569826 507 ntBASIC2.66□□□□□ -1.98
LMO3Q8TAP4 FTX_3.1-201ENST00000610451 147 ntBASIC2.66□□□□□ -1.98
LMO3Q8TAP4 AL138825.1-201ENST00000618587 192 ntBASIC2.66□□□□□ -1.98
LMO3Q8TAP4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.66□□□□□ -1.98
LMO3Q8TAP4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.66□□□□□ -1.98
LMO3Q8TAP4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.65□□□□□ -1.98
LMO3Q8TAP4 AC016717.2-201ENST00000609089 5141 ntBASIC2.65□□□□□ -1.98
LMO3Q8TAP4 MTND5P9-201ENST00000503854 1755 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 MIR6073-201ENST00000352083 89 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 FTLP6-201ENST00000355274 422 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 RNU6-428P-201ENST00000362942 107 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 Y_RNA.152-201ENST00000363578 100 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 RNY3P11-201ENST00000364153 102 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 Y_RNA.214-201ENST00000364201 112 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 RNA5SP189-201ENST00000364920 115 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 RNU6-1318P-201ENST00000365389 103 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 Z98749.2-208ENST00000381646 500 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 RNU6-217P-201ENST00000384164 104 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 RNU6-72P-201ENST00000384285 79 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 Y_RNA.551-201ENST00000384661 102 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 MIR521-1-201ENST00000384902 87 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 RPL21P1-201ENST00000399532 476 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 AC009963.1-201ENST00000417265 157 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 AC007560.1-201ENST00000426912 237 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LMO3Q8TAP4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.65□□□□□ -1.99
LMO3Q8TAP4 AC079354.2-201ENST00000453523 154 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 U8.21-201ENST00000459536 136 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 RPL30P5-201ENST00000494923 336 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 AC114801.2-201ENST00000503825 781 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.65□□□□□ -1.99
LMO3Q8TAP4 RNU6-377P-201ENST00000515965 102 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 Y_RNA.668-201ENST00000516233 93 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 RNU6-612P-201ENST00000516909 102 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 Y_RNA.715-201ENST00000517082 110 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.65□□□□□ -1.99
LMO3Q8TAP4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.65□□□□□ -1.99
LMO3Q8TAP4 AC131281.1-201ENST00000522984 164 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 CASP1P1-201ENST00000526345 212 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 AC040926.1-201ENST00000530195 238 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 AP004242.1-201ENST00000533701 349 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.65□□□□□ -1.99
LMO3Q8TAP4 AC060766.3-201ENST00000591442 263 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 AC008962.1-201ENST00000605729 304 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 AC009318.2-201ENST00000610917 651 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 AC010297.1-201ENST00000623948 149 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 ZNF72P-201ENST00000425869 1908 ntBASIC2.65□□□□□ -1.99
LMO3Q8TAP4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.65□□□□□ -1.99
LMO3Q8TAP4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LMO3Q8TAP4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.65□□□□□ -1.99
LMO3Q8TAP4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LMO3Q8TAP4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
LMO3Q8TAP4 MIR21-201ENST00000362134 72 ntBASIC2.64□□□□□ -1.99
LMO3Q8TAP4 RNU6-778P-201ENST00000363269 103 ntBASIC2.64□□□□□ -1.99
LMO3Q8TAP4 Y_RNA.188-201ENST00000363952 111 ntBASIC2.64□□□□□ -1.99
LMO3Q8TAP4 Y_RNA.276-201ENST00000364732 109 ntBASIC2.64□□□□□ -1.99
LMO3Q8TAP4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.64□□□□□ -1.99
LMO3Q8TAP4 RNU6-784P-201ENST00000384330 106 ntBASIC2.64□□□□□ -1.99
LMO3Q8TAP4 Y_RNA.512-201ENST00000384518 102 ntBASIC2.64□□□□□ -1.99
LMO3Q8TAP4 RNU6-1222P-201ENST00000384615 107 ntBASIC2.64□□□□□ -1.99
LMO3Q8TAP4 MIR325-201ENST00000385260 98 ntBASIC2.64□□□□□ -1.99
LMO3Q8TAP4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.64□□□□□ -1.99
LMO3Q8TAP4 RPL21P2-201ENST00000440049 481 ntBASIC2.64□□□□□ -1.99
LMO3Q8TAP4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LMO3Q8TAP4 MTATP6P7-201ENST00000453315 681 ntBASIC2.64□□□□□ -1.99
LMO3Q8TAP4 snoU109.2-201ENST00000459316 135 ntBASIC2.64□□□□□ -1.99
LMO3Q8TAP4 AL049873.1-201ENST00000480540 376 ntBASIC2.64□□□□□ -1.99
LMO3Q8TAP4 RPL30P10-201ENST00000488148 337 ntBASIC2.64□□□□□ -1.99
LMO3Q8TAP4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.64□□□□□ -1.99
LMO3Q8TAP4 AK3P2-201ENST00000507976 429 ntBASIC2.64□□□□□ -1.99
LMO3Q8TAP4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.64□□□□□ -1.99
LMO3Q8TAP4 RNA5SP148-201ENST00000516527 94 ntBASIC2.64□□□□□ -1.99
LMO3Q8TAP4 RNU6-826P-201ENST00000516827 104 ntBASIC2.64□□□□□ -1.99
LMO3Q8TAP4 AC144568.1-201ENST00000520139 137 ntBASIC2.64□□□□□ -1.99
LMO3Q8TAP4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.64□□□□□ -1.99
LMO3Q8TAP4 VN1R91P-201ENST00000594377 169 ntBASIC2.64□□□□□ -1.99
LMO3Q8TAP4 AL355598.1-201ENST00000604169 202 ntBASIC2.64□□□□□ -1.99
LMO3Q8TAP4 AC006023.2-201ENST00000609916 167 ntBASIC2.64□□□□□ -1.99
LMO3Q8TAP4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.64□□□□□ -1.99
LMO3Q8TAP4 MIR6817-201ENST00000615588 66 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms