Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 SNORD115-7-201ENST00000365306 82 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 RNU6-45P-201ENST00000384471 107 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 Y_RNA.576-201ENST00000384781 102 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 RNA5SP201-201ENST00000410316 124 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 ISCA1P6-201ENST00000427740 390 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 Z82205.1-201ENST00000428456 297 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 RPS27AP8-201ENST00000452665 445 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 AC013470.1-201ENST00000453438 462 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 AL133373.1-201ENST00000497098 94 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 AC005840.1-201ENST00000498412 377 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 AC116562.3-201ENST00000506136 177 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 AC108078.1-201ENST00000508073 725 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 RNU6-311P-201ENST00000516224 102 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 AC068587.5-201ENST00000528506 175 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 AC112191.3-201ENST00000604371 277 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 AL121992.2-201ENST00000606262 256 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 AP000240.1-201ENST00000609910 452 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 TUSC7.1-201ENST00000610969 165 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 MIR6078-201ENST00000611069 100 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 AC091304.9-201ENST00000612091 226 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 MIR7844-201ENST00000616161 122 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 AC097372.5-201ENST00000623665 376 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 MTND5P17-201ENST00000418405 1603 ntBASIC1.1□□□□□ -2.23
CLHC1Q8NHS4 RNU4-91P-201ENST00000364778 135 ntBASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 RNU6-169P-201ENST00000365336 107 ntBASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 RNU6-43P-201ENST00000384302 107 ntBASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 MRPL35P1-201ENST00000404272 572 ntBASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 RNU2-8P-201ENST00000410727 190 ntBASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 RNU6-1245P-201ENST00000411130 106 ntBASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 AL161935.2-201ENST00000414627 60 ntBASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 OR6C66P-201ENST00000414917 930 ntBASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 C1DP2-201ENST00000418167 426 ntBASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 EIF1P1-201ENST00000421436 341 ntBASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 AL591704.2-201ENST00000421658 181 ntBASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 AL354692.1-201ENST00000423044 315 ntBASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 HSPE1P9-201ENST00000440046 311 ntBASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 SCARNA24.1-201ENST00000516465 137 ntBASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 SNORD60.2-201ENST00000516883 86 ntBASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 AC109479.2-201ENST00000517842 174 ntBASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 HSPE1P19-201ENST00000603327 295 ntBASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 AL356157.2-201ENST00000605122 111 ntBASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 AL353770.2-201ENST00000620024 78 ntBASIC1.09□□□□□ -2.23
CLHC1Q8NHS4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.09□□□□□ -2.24
CLHC1Q8NHS4 AC106754.1-201ENST00000562632 1513 ntBASIC1.09□□□□□ -2.24
CLHC1Q8NHS4 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.08□□□□□ -2.24
CLHC1Q8NHS4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CLHC1Q8NHS4 U3.4-201ENST00000363352 213 ntBASIC1.08□□□□□ -2.24
CLHC1Q8NHS4 Y_RNA.324-201ENST00000365165 102 ntBASIC1.08□□□□□ -2.24
CLHC1Q8NHS4 RNU5E-5P-201ENST00000365379 116 ntBASIC1.08□□□□□ -2.24
CLHC1Q8NHS4 MIR520A-201ENST00000384862 85 ntBASIC1.08□□□□□ -2.24
CLHC1Q8NHS4 SNORA26.3-201ENST00000391119 136 ntBASIC1.08□□□□□ -2.24
CLHC1Q8NHS4 RN7SKP61-201ENST00000410642 295 ntBASIC1.08□□□□□ -2.24
CLHC1Q8NHS4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.08□□□□□ -2.24
CLHC1Q8NHS4 AC078809.1-201ENST00000427601 140 ntBASIC1.08□□□□□ -2.24
CLHC1Q8NHS4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.08□□□□□ -2.24
CLHC1Q8NHS4 RAP1BP2-201ENST00000478270 544 ntBASIC1.08□□□□□ -2.24
CLHC1Q8NHS4 ATP5EP1-201ENST00000510257 156 ntBASIC1.08□□□□□ -2.24
CLHC1Q8NHS4 RNU6-1220P-201ENST00000517126 108 ntBASIC1.08□□□□□ -2.24
CLHC1Q8NHS4 AC023050.3-201ENST00000541142 333 ntBASIC1.08□□□□□ -2.24
CLHC1Q8NHS4 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.08□□□□□ -2.24
CLHC1Q8NHS4 AC027807.2-201ENST00000616099 408 ntBASIC1.08□□□□□ -2.24
CLHC1Q8NHS4 AC009159.2-201ENST00000617603 606 ntBASIC1.08□□□□□ -2.24
CLHC1Q8NHS4 MIR8065-201ENST00000620577 100 ntBASIC1.08□□□□□ -2.24
CLHC1Q8NHS4 AC007671.2-201ENST00000637344 619 ntBASIC1.08□□□□□ -2.24
CLHC1Q8NHS4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.08□□□□□ -2.24
CLHC1Q8NHS4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
CLHC1Q8NHS4 MTND5P35-201ENST00000557537 1720 ntBASIC1.07□□□□□ -2.24
CLHC1Q8NHS4 Y_RNA.238-201ENST00000364441 102 ntBASIC1.07□□□□□ -2.24
CLHC1Q8NHS4 RNU2-7P-201ENST00000410794 178 ntBASIC1.07□□□□□ -2.24
CLHC1Q8NHS4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.07□□□□□ -2.24
CLHC1Q8NHS4 MTCO3P41-201ENST00000414801 328 ntBASIC1.07□□□□□ -2.24
CLHC1Q8NHS4 AC010975.2-201ENST00000427781 588 ntBASIC1.07□□□□□ -2.24
CLHC1Q8NHS4 AC245047.4-201ENST00000433189 144 ntBASIC1.07□□□□□ -2.24
CLHC1Q8NHS4 AC099677.2-201ENST00000436385 175 ntBASIC1.07□□□□□ -2.24
CLHC1Q8NHS4 AC244670.1-201ENST00000436879 112 ntBASIC1.07□□□□□ -2.24
CLHC1Q8NHS4 USP9YP12-201ENST00000450481 570 ntBASIC1.07□□□□□ -2.24
CLHC1Q8NHS4 OR2AQ1P-201ENST00000451972 200 ntBASIC1.07□□□□□ -2.24
CLHC1Q8NHS4 AC007547.1-201ENST00000462177 490 ntBASIC1.07□□□□□ -2.24
CLHC1Q8NHS4 MTND2P14-201ENST00000482139 351 ntBASIC1.07□□□□□ -2.24
CLHC1Q8NHS4 RNU6-377P-201ENST00000515965 102 ntBASIC1.07□□□□□ -2.24
CLHC1Q8NHS4 SUMO2P18-201ENST00000518873 252 ntBASIC1.07□□□□□ -2.24
CLHC1Q8NHS4 AP003072.2-201ENST00000527756 676 ntBASIC1.07□□□□□ -2.24
CLHC1Q8NHS4 CYP3A52P-201ENST00000563326 91 ntBASIC1.07□□□□□ -2.24
CLHC1Q8NHS4 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.07□□□□□ -2.24
CLHC1Q8NHS4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms