Protein–RNA interactions for Protein: Q8NEL0

CCDC54, Coiled-coil domain-containing protein 54, humanhuman

Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54Q8NEL0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 RNU6-522P-201ENST00000364497 107 ntBASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 RNU6-546P-201ENST00000383991 107 ntBASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 RNA5SP219-201ENST00000390940 113 ntBASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 BX510359.4-201ENST00000423750 193 ntBASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 TOMM20P4-201ENST00000427861 435 ntBASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 AL589823.1-201ENST00000429577 183 ntBASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 VN1R108P-201ENST00000431580 830 ntBASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 RPL7P54-201ENST00000438336 674 ntBASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 AC006026.2-201ENST00000457376 180 ntBASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 RPL21P99-201ENST00000480369 423 ntBASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 AC008549.1-201ENST00000512900 643 ntBASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 SNORA14.1-201ENST00000516113 141 ntBASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 CBX3P4-201ENST00000538909 354 ntBASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 MIR4419B-201ENST00000577260 68 ntBASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 AC064836.2-201ENST00000609491 462 ntBASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 AL158209.2-201ENST00000619266 216 ntBASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 AC048344.4-201ENST00000619744 527 ntBASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 AL359880.1-201ENST00000621879 266 ntBASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 AC124864.2-201ENST00000624736 186 ntBASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.57□□□□□ -2.16
CCDC54Q8NEL0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 MIR340-201ENST00000362125 95 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 Y_RNA.194-201ENST00000363985 102 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 MIR514A2-201ENST00000385131 88 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 MIR514A3-201ENST00000385132 88 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 RNU2-20P-201ENST00000410425 191 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 RNU2-16P-201ENST00000410712 136 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 C8orf59P1-201ENST00000429930 303 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 MTATP6P26-201ENST00000445926 662 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 AL137159.1-201ENST00000452808 512 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 TPTE2P5-203ENST00000458118 728 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 RPS29P27-201ENST00000463711 170 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 AC005741.1-201ENST00000511094 432 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 RNA5SP401-201ENST00000515920 127 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 RNU6-1069P-201ENST00000516612 133 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 AC109479.2-201ENST00000517842 174 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 MTND4P7-201ENST00000523876 130 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 CENPUP1-201ENST00000526649 1202 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 AP003034.1-201ENST00000534621 422 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 MIR4648-201ENST00000580107 72 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 AC103987.3-201ENST00000582071 292 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 NBR2-204ENST00000587322 63 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 AC004223.2-201ENST00000590309 544 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 AC078795.3-201ENST00000602913 472 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 AC093783.1-201ENST00000612976 329 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 AC103705.1-201ENST00000619013 241 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 OR5AK4P-201ENST00000635912 903 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 SNORD98-201ENST00000636377 67 ntBASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CCDC54Q8NEL0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 RNU6-743P-201ENST00000364151 106 ntBASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 RNU6-1141P-201ENST00000364520 107 ntBASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 RNU4-24P-201ENST00000364565 139 ntBASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 RNU6-611P-201ENST00000384276 104 ntBASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 RNU6-997P-201ENST00000384725 107 ntBASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 SNORA26.3-201ENST00000391119 136 ntBASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 MTCO3P40-201ENST00000392516 676 ntBASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 AL606923.1-201ENST00000406616 190 ntBASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 RNA5SP201-201ENST00000410316 124 ntBASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 RNU6-1068P-201ENST00000410958 103 ntBASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 SNRPGP7-201ENST00000469016 106 ntBASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 AC010493.1-201ENST00000513479 292 ntBASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 VN1R107P-201ENST00000601784 209 ntBASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 SNRPGP17-201ENST00000603780 214 ntBASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 AP001836.1-201ENST00000604675 523 ntBASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 AL034555.1-201ENST00000604816 211 ntBASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 AL121757.2-201ENST00000611223 313 ntBASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 U2.17-201ENST00000611454 95 ntBASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 FAM157A-202ENST00000615155 405 ntBASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
CCDC54Q8NEL0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC54Q8NEL0 SNORD115-3-201ENST00000363100 82 ntBASIC1.54□□□□□ -2.16
CCDC54Q8NEL0 RNA5SP363-201ENST00000365072 115 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms