Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 NFU1P2-201ENST00000448700 469 ntBASIC-0.26□□□□□ -2.45
VPS8Q8N3P4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.26□□□□□ -2.45
VPS8Q8N3P4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.26□□□□□ -2.45
VPS8Q8N3P4 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-0.26□□□□□ -2.45
VPS8Q8N3P4 AC090888.2-201ENST00000559765 1144 ntBASIC-0.26□□□□□ -2.45
VPS8Q8N3P4 MIR4493-201ENST00000584016 73 ntBASIC-0.26□□□□□ -2.45
VPS8Q8N3P4 AC009268.2-201ENST00000621925 457 ntBASIC-0.26□□□□□ -2.45
VPS8Q8N3P4 MIR3529-201ENST00000637713 78 ntBASIC-0.26□□□□□ -2.45
VPS8Q8N3P4 AL159152.1-201ENST00000635019 2587 ntBASIC-0.26□□□□□ -2.45
VPS8Q8N3P4 MTND5P16-201ENST00000460269 1703 ntBASIC-0.26□□□□□ -2.45
VPS8Q8N3P4 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
VPS8Q8N3P4 RNU6-862P-201ENST00000362804 105 ntBASIC-0.27□□□□□ -2.45
VPS8Q8N3P4 RNU6-833P-201ENST00000363486 107 ntBASIC-0.27□□□□□ -2.45
VPS8Q8N3P4 SNORD114-15-201ENST00000364687 72 ntBASIC-0.27□□□□□ -2.45
VPS8Q8N3P4 RNU6-793P-201ENST00000384233 104 ntBASIC-0.27□□□□□ -2.45
VPS8Q8N3P4 TRIM60P5Y-201ENST00000413946 574 ntBASIC-0.27□□□□□ -2.45
VPS8Q8N3P4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
VPS8Q8N3P4 RNU6-947P-201ENST00000516264 106 ntBASIC-0.27□□□□□ -2.45
VPS8Q8N3P4 RNU6-885P-201ENST00000516607 104 ntBASIC-0.27□□□□□ -2.45
VPS8Q8N3P4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-0.27□□□□□ -2.45
VPS8Q8N3P4 AC011195.1-201ENST00000578177 177 ntBASIC-0.27□□□□□ -2.45
VPS8Q8N3P4 MIR4645-201ENST00000583158 77 ntBASIC-0.27□□□□□ -2.45
VPS8Q8N3P4 AL353778.1-201ENST00000603149 408 ntBASIC-0.27□□□□□ -2.45
VPS8Q8N3P4 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.28□□□□□ -2.45
VPS8Q8N3P4 AC123900.1-201ENST00000420390 96 ntBASIC-0.28□□□□□ -2.45
VPS8Q8N3P4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.28□□□□□ -2.45
VPS8Q8N3P4 MTCYBP11-201ENST00000447254 1109 ntBASIC-0.28□□□□□ -2.45
VPS8Q8N3P4 AL353752.1-201ENST00000454946 260 ntBASIC-0.28□□□□□ -2.45
VPS8Q8N3P4 RPS26P48-201ENST00000491713 339 ntBASIC-0.28□□□□□ -2.45
VPS8Q8N3P4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC-0.28□□□□□ -2.45
VPS8Q8N3P4 RNA5SP135-201ENST00000517019 125 ntBASIC-0.28□□□□□ -2.45
VPS8Q8N3P4 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-0.28□□□□□ -2.45
VPS8Q8N3P4 AL391001.1-201ENST00000602747 715 ntBASIC-0.28□□□□□ -2.45
VPS8Q8N3P4 AL513534.2-201ENST00000603836 250 ntBASIC-0.28□□□□□ -2.45
VPS8Q8N3P4 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.28□□□□□ -2.45
VPS8Q8N3P4 7SK.10-201ENST00000621414 298 ntBASIC-0.28□□□□□ -2.45
VPS8Q8N3P4 AC100810.6-201ENST00000638068 285 ntBASIC-0.28□□□□□ -2.45
VPS8Q8N3P4 RNU6-28P-201ENST00000362378 107 ntBASIC-0.29□□□□□ -2.46
VPS8Q8N3P4 ARL5AP1-201ENST00000418991 388 ntBASIC-0.29□□□□□ -2.46
VPS8Q8N3P4 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.29□□□□□ -2.46
VPS8Q8N3P4 HMGB1P30-201ENST00000492455 606 ntBASIC-0.29□□□□□ -2.46
VPS8Q8N3P4 HMGB1P29-201ENST00000505659 499 ntBASIC-0.29□□□□□ -2.46
VPS8Q8N3P4 AL158211.1-201ENST00000566763 763 ntBASIC-0.29□□□□□ -2.46
VPS8Q8N3P4 AC136618.2-201ENST00000575091 400 ntBASIC-0.29□□□□□ -2.46
VPS8Q8N3P4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.29□□□□□ -2.46
VPS8Q8N3P4 MIR103A1-201ENST00000362165 78 ntBASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 MTATP6P30-201ENST00000443540 664 ntBASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 snoU13.8-201ENST00000458890 104 ntBASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 RNU7-21P-201ENST00000459430 62 ntBASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 AC023824.3-201ENST00000569003 562 ntBASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 AC078795.2-201ENST00000602835 1252 ntBASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 AL355816.2-201ENST00000610049 647 ntBASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 SNRPEP3-201ENST00000338402 276 ntBASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 MIR518A1-201ENST00000385068 85 ntBASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 AL133264.1-201ENST00000407157 562 ntBASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 AL139421.1-201ENST00000423010 169 ntBASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 RAC1P8-201ENST00000427086 527 ntBASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 MTND5P2-201ENST00000442927 1142 ntBASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 AC020550.1-201ENST00000447385 163 ntBASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 RNU7-34P-201ENST00000459394 64 ntBASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 AC009646.1-201ENST00000510455 318 ntBASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 MIR4764-201ENST00000580680 88 ntBASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 MIR4290-201ENST00000583807 95 ntBASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 AL157786.1-207ENST00000627771 695 ntBASIC-0.3□□□□□ -2.46
VPS8Q8N3P4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC-0.31□□□□□ -2.46
VPS8Q8N3P4 RNA5SP214-201ENST00000363378 118 ntBASIC-0.31□□□□□ -2.46
VPS8Q8N3P4 RNA5SP496-201ENST00000391240 109 ntBASIC-0.31□□□□□ -2.46
VPS8Q8N3P4 AL590084.2-201ENST00000401481 382 ntBASIC-0.31□□□□□ -2.46
VPS8Q8N3P4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.31□□□□□ -2.46
VPS8Q8N3P4 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.31□□□□□ -2.46
VPS8Q8N3P4 MTCO2P5-201ENST00000422621 426 ntBASIC-0.31□□□□□ -2.46
VPS8Q8N3P4 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.31□□□□□ -2.46
VPS8Q8N3P4 MTND1P20-201ENST00000430341 950 ntBASIC-0.31□□□□□ -2.46
VPS8Q8N3P4 RPS15AP10-201ENST00000432472 382 ntBASIC-0.31□□□□□ -2.46
VPS8Q8N3P4 MED28P2-201ENST00000475771 317 ntBASIC-0.31□□□□□ -2.46
VPS8Q8N3P4 AC093534.1-201ENST00000504977 132 ntBASIC-0.31□□□□□ -2.46
VPS8Q8N3P4 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.31□□□□□ -2.46
VPS8Q8N3P4 RNU6-572P-201ENST00000516724 80 ntBASIC-0.31□□□□□ -2.46
VPS8Q8N3P4 AL031667.3-201ENST00000620124 655 ntBASIC-0.31□□□□□ -2.46
VPS8Q8N3P4 AC011155.2-201ENST00000623202 216 ntBASIC-0.31□□□□□ -2.46
VPS8Q8N3P4 RNU6-212P-201ENST00000362642 104 ntBASIC-0.32□□□□□ -2.46
VPS8Q8N3P4 SNORD114-9-201ENST00000364370 72 ntBASIC-0.32□□□□□ -2.46
VPS8Q8N3P4 RNU6-843P-201ENST00000384454 104 ntBASIC-0.32□□□□□ -2.46
VPS8Q8N3P4 MIR604-201ENST00000384880 94 ntBASIC-0.32□□□□□ -2.46
VPS8Q8N3P4 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-0.32□□□□□ -2.46
VPS8Q8N3P4 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.32□□□□□ -2.46
VPS8Q8N3P4 SNRPGP12-201ENST00000449481 213 ntBASIC-0.32□□□□□ -2.46
VPS8Q8N3P4 MTND1P9-201ENST00000453775 944 ntBASIC-0.32□□□□□ -2.46
VPS8Q8N3P4 LAMTOR3P2-201ENST00000504479 232 ntBASIC-0.32□□□□□ -2.46
VPS8Q8N3P4 SCARNA8-201ENST00000515924 131 ntBASIC-0.32□□□□□ -2.46
VPS8Q8N3P4 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms