Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AL356292.1-201ENST00000283110 373 ntBASIC2.24□□□□□ -2.05
CCDC60Q8IWA6 RNU1-72P-201ENST00000362976 153 ntBASIC2.24□□□□□ -2.05
CCDC60Q8IWA6 SNORA3A-201ENST00000364113 130 ntBASIC2.24□□□□□ -2.05
CCDC60Q8IWA6 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CCDC60Q8IWA6 RNU6-1032P-201ENST00000384100 107 ntBASIC2.24□□□□□ -2.05
CCDC60Q8IWA6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.24□□□□□ -2.05
CCDC60Q8IWA6 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC60Q8IWA6 AC243964.1-201ENST00000441814 261 ntBASIC2.24□□□□□ -2.05
CCDC60Q8IWA6 NFU1P2-201ENST00000448700 469 ntBASIC2.24□□□□□ -2.05
CCDC60Q8IWA6 AC013470.1-201ENST00000453438 462 ntBASIC2.24□□□□□ -2.05
CCDC60Q8IWA6 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC60Q8IWA6 PSMA3P-201ENST00000555485 635 ntBASIC2.24□□□□□ -2.05
CCDC60Q8IWA6 AC093249.1-201ENST00000567049 203 ntBASIC2.24□□□□□ -2.05
CCDC60Q8IWA6 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
CCDC60Q8IWA6 SNRPGP19-201ENST00000603826 189 ntBASIC2.24□□□□□ -2.05
CCDC60Q8IWA6 AC009314.1-201ENST00000603871 304 ntBASIC2.24□□□□□ -2.05
CCDC60Q8IWA6 ELOCP5-201ENST00000604924 333 ntBASIC2.24□□□□□ -2.05
CCDC60Q8IWA6 AC064836.2-201ENST00000609491 462 ntBASIC2.24□□□□□ -2.05
CCDC60Q8IWA6 AC092794.1-201ENST00000612734 582 ntBASIC2.24□□□□□ -2.05
CCDC60Q8IWA6 MIR6895-201ENST00000613497 78 ntBASIC2.24□□□□□ -2.05
CCDC60Q8IWA6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.24□□□□□ -2.05
CCDC60Q8IWA6 MTND4P5-201ENST00000435821 1374 ntBASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 RNU6-655P-201ENST00000362858 107 ntBASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 U8.13-201ENST00000390842 128 ntBASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 RPS15AP10-201ENST00000432472 382 ntBASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 AL359672.1-201ENST00000442302 409 ntBASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 AC007547.1-201ENST00000462177 490 ntBASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 AC009127.3-201ENST00000570531 403 ntBASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 MIR5089-201ENST00000580047 84 ntBASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 BNIP3P16-201ENST00000589779 534 ntBASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 AP003465.2-201ENST00000602571 373 ntBASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 FAM157A-202ENST00000615155 405 ntBASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 AC090517.3-201ENST00000625170 141 ntBASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 ZNF355P-201ENST00000427301 3216 ntBASIC2.23□□□□□ -2.05
CCDC60Q8IWA6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC60Q8IWA6 SNORD113-7-201ENST00000363762 77 ntBASIC2.22□□□□□ -2.05
CCDC60Q8IWA6 RNU6-214P-201ENST00000384130 107 ntBASIC2.22□□□□□ -2.05
CCDC60Q8IWA6 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.22□□□□□ -2.05
CCDC60Q8IWA6 NDUFA5P4-201ENST00000436704 385 ntBASIC2.22□□□□□ -2.05
CCDC60Q8IWA6 MTATP6P13-201ENST00000438531 667 ntBASIC2.22□□□□□ -2.05
CCDC60Q8IWA6 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC60Q8IWA6 AL121594.1-201ENST00000475906 575 ntBASIC2.22□□□□□ -2.05
CCDC60Q8IWA6 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.22□□□□□ -2.05
CCDC60Q8IWA6 AC109329.1-201ENST00000518744 317 ntBASIC2.22□□□□□ -2.05
CCDC60Q8IWA6 CBX3P7-201ENST00000532876 502 ntBASIC2.22□□□□□ -2.05
CCDC60Q8IWA6 AC091135.1-201ENST00000585943 307 ntBASIC2.22□□□□□ -2.05
CCDC60Q8IWA6 AL670379.2-201ENST00000604983 252 ntBASIC2.22□□□□□ -2.05
CCDC60Q8IWA6 AL138963.2-201ENST00000605137 226 ntBASIC2.22□□□□□ -2.05
CCDC60Q8IWA6 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CCDC60Q8IWA6 AC009233.1-201ENST00000616477 371 ntBASIC2.22□□□□□ -2.05
CCDC60Q8IWA6 AC002553.4-201ENST00000616896 331 ntBASIC2.22□□□□□ -2.05
CCDC60Q8IWA6 AC012640.5-201ENST00000623897 319 ntBASIC2.22□□□□□ -2.05
CCDC60Q8IWA6 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.22□□□□□ -2.05
CCDC60Q8IWA6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 RNU6-254P-201ENST00000363377 107 ntBASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 RNA5SP160-201ENST00000364866 120 ntBASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 RNU6-1329P-201ENST00000365664 107 ntBASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 SNORA32.2-201ENST00000384049 122 ntBASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 SNORA51.11-201ENST00000384442 131 ntBASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 Y_RNA.530-201ENST00000384587 101 ntBASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 RNU6-1222P-201ENST00000384615 107 ntBASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 RPS29P13-201ENST00000402041 169 ntBASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 RNU2-63P-201ENST00000410792 194 ntBASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 AC009161.1-201ENST00000417306 376 ntBASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 AL591806.2-201ENST00000433122 173 ntBASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 MTCO2P3-201ENST00000442543 421 ntBASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 RPS29P25-201ENST00000481709 171 ntBASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 AC069439.1-201ENST00000494739 167 ntBASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 AC092436.3-201ENST00000511788 257 ntBASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 RNU6-273P-201ENST00000516937 96 ntBASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 MIR5694-201ENST00000581190 76 ntBASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 AL713866.2-201ENST00000603579 219 ntBASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 MIR5739-201ENST00000619803 80 ntBASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 AL359757.2-201ENST00000624309 274 ntBASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
CCDC60Q8IWA6 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC60Q8IWA6 Y_RNA.100-201ENST00000363141 102 ntBASIC2.2□□□□□ -2.06
CCDC60Q8IWA6 RNU6-1210P-201ENST00000363775 107 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms