Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
ATG4DQ86TL0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.61□□□□□ -1.83
ATG4DQ86TL0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
ATG4DQ86TL0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ATG4DQ86TL0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATG4DQ86TL0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.61□□□□□ -1.83
ATG4DQ86TL0 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ATG4DQ86TL0 IPO8P1-201ENST00000455509 3109 ntBASIC3.61□□□□□ -1.83
ATG4DQ86TL0 RNU6-799P-201ENST00000363567 107 ntBASIC3.61□□□□□ -1.83
ATG4DQ86TL0 RNU5F-3P-201ENST00000363767 117 ntBASIC3.61□□□□□ -1.83
ATG4DQ86TL0 RNA5SP399-201ENST00000364003 117 ntBASIC3.61□□□□□ -1.83
ATG4DQ86TL0 RNU6-1141P-201ENST00000364520 107 ntBASIC3.61□□□□□ -1.83
ATG4DQ86TL0 Y_RNA.251-201ENST00000364551 99 ntBASIC3.61□□□□□ -1.83
ATG4DQ86TL0 U8.7-201ENST00000364940 136 ntBASIC3.61□□□□□ -1.83
ATG4DQ86TL0 Y_RNA.521-201ENST00000384560 114 ntBASIC3.61□□□□□ -1.83
ATG4DQ86TL0 MIR3074-201ENST00000384885 81 ntBASIC3.61□□□□□ -1.83
ATG4DQ86TL0 SNORA40.5-201ENST00000391061 128 ntBASIC3.61□□□□□ -1.83
ATG4DQ86TL0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.61□□□□□ -1.83
ATG4DQ86TL0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.61□□□□□ -1.83
ATG4DQ86TL0 HMGB1P37-201ENST00000439613 609 ntBASIC3.61□□□□□ -1.83
ATG4DQ86TL0 RPS29P7-201ENST00000439662 171 ntBASIC3.61□□□□□ -1.83
ATG4DQ86TL0 RNU6-772P-201ENST00000516042 105 ntBASIC3.61□□□□□ -1.83
ATG4DQ86TL0 RNU1-103P-201ENST00000516502 125 ntBASIC3.61□□□□□ -1.83
ATG4DQ86TL0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.61□□□□□ -1.83
ATG4DQ86TL0 RN7SL703P-201ENST00000578485 302 ntBASIC3.61□□□□□ -1.83
ATG4DQ86TL0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
ATG4DQ86TL0 MIR3914-2-201ENST00000637339 95 ntBASIC3.61□□□□□ -1.83
ATG4DQ86TL0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATG4DQ86TL0 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATG4DQ86TL0 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.61□□□□□ -1.83
ATG4DQ86TL0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.6□□□□□ -1.83
ATG4DQ86TL0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
ATG4DQ86TL0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATG4DQ86TL0 UBE3AP2-201ENST00000429033 2259 ntBASIC3.6□□□□□ -1.83
ATG4DQ86TL0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.6□□□□□ -1.83
ATG4DQ86TL0 AC018555.1-201ENST00000567548 1980 ntBASIC3.6□□□□□ -1.83
ATG4DQ86TL0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATG4DQ86TL0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
ATG4DQ86TL0 MIR325-201ENST00000385260 98 ntBASIC3.6□□□□□ -1.83
ATG4DQ86TL0 RN7SKP61-201ENST00000410642 295 ntBASIC3.6□□□□□ -1.83
ATG4DQ86TL0 RN7SKP27-201ENST00000410684 333 ntBASIC3.6□□□□□ -1.83
ATG4DQ86TL0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.6□□□□□ -1.83
ATG4DQ86TL0 AC012306.1-201ENST00000423267 114 ntBASIC3.6□□□□□ -1.83
ATG4DQ86TL0 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.6□□□□□ -1.83
ATG4DQ86TL0 AL714022.1-201ENST00000439897 151 ntBASIC3.6□□□□□ -1.83
ATG4DQ86TL0 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.6□□□□□ -1.83
ATG4DQ86TL0 AC010285.1-201ENST00000470580 392 ntBASIC3.6□□□□□ -1.83
ATG4DQ86TL0 RPL23AP70-201ENST00000483361 460 ntBASIC3.6□□□□□ -1.83
ATG4DQ86TL0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.6□□□□□ -1.83
ATG4DQ86TL0 AC034105.4-201ENST00000568304 277 ntBASIC3.6□□□□□ -1.83
ATG4DQ86TL0 MIR3646-201ENST00000578301 84 ntBASIC3.6□□□□□ -1.83
ATG4DQ86TL0 AL391261.4-201ENST00000616012 481 ntBASIC3.6□□□□□ -1.83
ATG4DQ86TL0 AL591424.2-201ENST00000617023 128 ntBASIC3.6□□□□□ -1.83
ATG4DQ86TL0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
ATG4DQ86TL0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATG4DQ86TL0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.59□□□□□ -1.83
ATG4DQ86TL0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.59□□□□□ -1.83
ATG4DQ86TL0 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
ATG4DQ86TL0 AL136964.1-201ENST00000622038 2990 ntBASIC3.59□□□□□ -1.83
ATG4DQ86TL0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.59□□□□□ -1.83
ATG4DQ86TL0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.59□□□□□ -1.83
ATG4DQ86TL0 RNU1-64P-201ENST00000365443 163 ntBASIC3.59□□□□□ -1.83
ATG4DQ86TL0 SNORA72.4-201ENST00000384174 132 ntBASIC3.59□□□□□ -1.83
ATG4DQ86TL0 AL606845.1-201ENST00000404881 255 ntBASIC3.59□□□□□ -1.83
ATG4DQ86TL0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.59□□□□□ -1.83
ATG4DQ86TL0 AC244670.1-201ENST00000436879 112 ntBASIC3.59□□□□□ -1.83
ATG4DQ86TL0 MTCO1P44-201ENST00000441935 243 ntBASIC3.59□□□□□ -1.83
ATG4DQ86TL0 AC026726.1-201ENST00000512859 601 ntBASIC3.59□□□□□ -1.83
ATG4DQ86TL0 SNORD33.1-201ENST00000516213 88 ntBASIC3.59□□□□□ -1.83
ATG4DQ86TL0 RNU6-107P-201ENST00000516643 102 ntBASIC3.59□□□□□ -1.83
ATG4DQ86TL0 Y_RNA.694-201ENST00000516677 117 ntBASIC3.59□□□□□ -1.83
ATG4DQ86TL0 AP004371.1-201ENST00000525240 214 ntBASIC3.59□□□□□ -1.83
ATG4DQ86TL0 YPEL5P3-201ENST00000547227 352 ntBASIC3.59□□□□□ -1.83
ATG4DQ86TL0 AC021231.3-201ENST00000558497 370 ntBASIC3.59□□□□□ -1.83
ATG4DQ86TL0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.59□□□□□ -1.83
ATG4DQ86TL0 AC025946.2-201ENST00000603398 234 ntBASIC3.59□□□□□ -1.83
ATG4DQ86TL0 AC006065.5-201ENST00000623427 349 ntBASIC3.59□□□□□ -1.83
ATG4DQ86TL0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.59□□□□□ -1.83
ATG4DQ86TL0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
ATG4DQ86TL0 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
ATG4DQ86TL0 AC004925.1-201ENST00000624256 2706 ntBASIC3.58□□□□□ -1.84
ATG4DQ86TL0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ATG4DQ86TL0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.58□□□□□ -1.84
ATG4DQ86TL0 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ATG4DQ86TL0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.58□□□□□ -1.84
ATG4DQ86TL0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ATG4DQ86TL0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.58□□□□□ -1.84
ATG4DQ86TL0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ATG4DQ86TL0 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
ATG4DQ86TL0 RNU1-100P-201ENST00000365255 165 ntBASIC3.58□□□□□ -1.84
ATG4DQ86TL0 RNU6-140P-201ENST00000384566 108 ntBASIC3.58□□□□□ -1.84
ATG4DQ86TL0 FTH1P15-201ENST00000406984 280 ntBASIC3.58□□□□□ -1.84
ATG4DQ86TL0 RPS26P42-201ENST00000413485 326 ntBASIC3.58□□□□□ -1.84
ATG4DQ86TL0 AL356535.1-201ENST00000440335 398 ntBASIC3.58□□□□□ -1.84
ATG4DQ86TL0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
ATG4DQ86TL0 AC009237.8-201ENST00000445492 379 ntBASIC3.58□□□□□ -1.84
ATG4DQ86TL0 RPS27P1-201ENST00000450552 247 ntBASIC3.58□□□□□ -1.84
ATG4DQ86TL0 HSPE1P13-201ENST00000451143 297 ntBASIC3.58□□□□□ -1.84
ATG4DQ86TL0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.58□□□□□ -1.84
ATG4DQ86TL0 SNORA70.16-201ENST00000516390 95 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 180.5 ms