Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AL031274.2-201ENST00000599419 203 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 AL670379.2-201ENST00000604983 252 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 BNIP3P10-201ENST00000605360 577 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 AC093913.1-201ENST00000614178 329 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 CTSLP2-204ENST00000629029 392 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.28□□□□□ -2.04
NUP54Q7Z3B4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 Y_RNA.86-201ENST00000363020 111 ntBASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 Y_RNA.212-201ENST00000364177 102 ntBASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 U3.13-201ENST00000364804 214 ntBASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 Y_RNA.500-201ENST00000384466 111 ntBASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 SNORA41-201ENST00000384675 132 ntBASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 AL359511.1-201ENST00000402970 211 ntBASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 AL030996.1-201ENST00000411430 235 ntBASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 RPL30P16-201ENST00000419341 429 ntBASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 AL133396.1-201ENST00000432048 687 ntBASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 RNA5SP233-201ENST00000459153 113 ntBASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 RPL9P9-202ENST00000466501 579 ntBASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 RPS27P21-201ENST00000486977 252 ntBASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 MTCO1P29-201ENST00000496868 288 ntBASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 AC114801.2-201ENST00000503825 781 ntBASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 AC025465.4-201ENST00000513422 638 ntBASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 RNU5F-2P-201ENST00000516066 82 ntBASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 RNU6-864P-201ENST00000516256 108 ntBASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 AC023043.2-201ENST00000589678 1026 ntBASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
NUP54Q7Z3B4 RNU6-227P-201ENST00000362865 103 ntBASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 RNU6-1317P-201ENST00000364582 104 ntBASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 RNU6-1013P-201ENST00000384180 107 ntBASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 RNU6-831P-201ENST00000384548 107 ntBASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 AC244670.1-201ENST00000436879 112 ntBASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 AL513328.1-201ENST00000446460 224 ntBASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 UBE2DNL-203ENST00000474922 222 ntBASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 RPS27P27-201ENST00000498779 255 ntBASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 AC016632.1-201ENST00000503994 196 ntBASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 RPL39P5-202ENST00000512505 151 ntBASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 SNORA4.4-201ENST00000515921 135 ntBASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 MIR514B-201ENST00000516774 80 ntBASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 NDUFA5P6-201ENST00000542110 379 ntBASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 HSPE1P4-201ENST00000550617 308 ntBASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 CPDP1-201ENST00000579660 283 ntBASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 MIR3136-201ENST00000583498 78 ntBASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 MIR3942-201ENST00000585264 109 ntBASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 SNRPGP17-201ENST00000603780 214 ntBASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.26□□□□□ -2.05
NUP54Q7Z3B4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 AC092268.1-201ENST00000342691 405 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 RNU6-562P-201ENST00000362731 107 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 Y_RNA.72-201ENST00000362894 103 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 RNU6-1159P-201ENST00000362933 107 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 U8.8-201ENST00000365399 135 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 SNORD116-11-201ENST00000383882 92 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 SNORA32.2-201ENST00000384049 122 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 MIR518C-201ENST00000384822 101 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 MIR29B2-201ENST00000385055 81 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 RNU6-510P-201ENST00000391239 108 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 BTF3L4P2-201ENST00000392798 346 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 HMGN2P39-201ENST00000398005 273 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 AL356776.1-201ENST00000406574 447 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 RNU6-325P-201ENST00000411132 105 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 USP9YP28-201ENST00000435142 589 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 CR769767.1-201ENST00000436337 346 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 AL353752.1-201ENST00000454946 260 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 RPS29P27-201ENST00000463711 170 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 RPL31P58-201ENST00000469001 379 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 SNRPGP7-201ENST00000469016 106 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 HMGB1P35-201ENST00000503360 598 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 AC018710.1-201ENST00000506509 158 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 AC010486.1-201ENST00000511793 424 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 MIR4287-201ENST00000579398 78 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 AC018889.1-201ENST00000605372 397 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 AC243829.7-201ENST00000633081 225 ntBASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
NUP54Q7Z3B4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 SNORA16B-201ENST00000364674 135 ntBASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 RNU6-1032P-201ENST00000384100 107 ntBASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 RNU6-95P-201ENST00000384697 107 ntBASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 SNORA26.3-201ENST00000391119 136 ntBASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 FGF7P8-201ENST00000402994 292 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms