Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 RNU6-784P-201ENST00000384330 106 ntBASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 RNU4-14P-201ENST00000410858 122 ntBASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 AIMP1P2-201ENST00000425294 312 ntBASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 PCMTD1P1-201ENST00000455560 355 ntBASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 Y_RNA.635-201ENST00000459041 101 ntBASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 SNORA59A-201ENST00000459326 152 ntBASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 AC073901.1-201ENST00000462471 408 ntBASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 MTND4P17-201ENST00000470444 350 ntBASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 RNA5SP24-201ENST00000516478 95 ntBASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 AC016256.1-201ENST00000547971 354 ntBASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 AC018889.1-201ENST00000605372 397 ntBASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 MIR7515-201ENST00000637837 67 ntBASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SYNE3Q6ZMZ3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 Y_RNA.40-201ENST00000362645 93 ntBASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 RNU6-174P-201ENST00000410406 106 ntBASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 AC097463.2-201ENST00000421074 142 ntBASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 AC012308.1-201ENST00000451232 178 ntBASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 RPL36AP48-201ENST00000485521 314 ntBASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 RPL22P13-201ENST00000493291 347 ntBASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 RNA5SP82-201ENST00000516707 92 ntBASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 RNU1-54P-201ENST00000517181 120 ntBASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 AC021269.2-201ENST00000532318 330 ntBASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 AC103810.1-201ENST00000579873 453 ntBASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 MIR4765-201ENST00000585007 77 ntBASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 AC016727.1-205ENST00000605437 569 ntBASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 AC007792.1-201ENST00000623023 402 ntBASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 MIR1291-201ENST00000627649 87 ntBASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 CTSLP2-204ENST00000629029 392 ntBASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 SNORA43.4-201ENST00000629559 138 ntBASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 AC112487.2-201ENST00000637950 304 ntBASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.82□□□□□ -1.96
SYNE3Q6ZMZ3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 RNU1-72P-201ENST00000362976 153 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 RNU6-529P-201ENST00000363383 104 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 RNU6-461P-201ENST00000364195 107 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 RNU6-933P-201ENST00000384424 107 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 RNU1-57P-201ENST00000384491 166 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 Y_RNA.509-201ENST00000384506 99 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 RNU6-601P-201ENST00000384540 107 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 MIR544A-201ENST00000384855 91 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 AL591034.2-201ENST00000402839 359 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 AL133475.1-201ENST00000404414 305 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 U6atac.2-201ENST00000408644 118 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 EIF4EP2-201ENST00000422816 654 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 EIF4EP4-201ENST00000424916 578 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 AC078809.1-201ENST00000427601 140 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 RPL39P29-201ENST00000447779 157 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 AC080013.2-201ENST00000460866 323 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 AC026436.1-201ENST00000510537 270 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 AC115990.1-201ENST00000526957 301 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 MIR3616-201ENST00000584070 92 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 AC011494.1-201ENST00000596454 237 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 AC019193.3-201ENST00000609144 554 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 MIR6128-201ENST00000615528 109 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 AL450472.1-202ENST00000637286 180 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 MIR1302-1-201ENST00000637932 143 ntBASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.81□□□□□ -1.96
SYNE3Q6ZMZ3 Z75746.1-201ENST00000440243 2080 ntBASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 AC069528.2-201ENST00000624849 1991 ntBASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 Y_RNA.387-201ENST00000383918 102 ntBASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 RNU6-306P-201ENST00000384617 107 ntBASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 MIR186-201ENST00000384988 86 ntBASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 AC007064.1-201ENST00000412238 351 ntBASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 Z98742.2-201ENST00000431564 187 ntBASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 AC236972.1-201ENST00000433225 199 ntBASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 AL513328.1-201ENST00000446460 224 ntBASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 AC079354.2-201ENST00000453523 154 ntBASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 AC112771.1-201ENST00000463581 102 ntBASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 AL121594.1-201ENST00000475906 575 ntBASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 SMURF2P1-201ENST00000514992 481 ntBASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 SCARNA3-201ENST00000517097 143 ntBASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 AC027176.1-201ENST00000560204 514 ntBASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 AC105137.2-201ENST00000569073 466 ntBASIC2.8□□□□□ -1.96
SYNE3Q6ZMZ3 MIR5571-201ENST00000577998 113 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms