Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AL355598.1-201ENST00000604169 202 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 AC107304.1-201ENST00000604229 296 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 AC242852.1-201ENST00000612151 96 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 AC244015.1-201ENST00000622301 99 ntBASIC-0.04□□□□□ -2.42
CSPG4Q6UVK1 DLEU2_6.3-201ENST00000340052 136 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 AC092268.1-201ENST00000342691 405 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 RNU6-1010P-201ENST00000362757 107 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 SNORA42.1-201ENST00000363515 137 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 RNY1P8-201ENST00000383970 114 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 SNORA12-201ENST00000391162 147 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 MTCO2P31-201ENST00000402702 684 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 RPS3AP1-201ENST00000413190 320 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 MTCO3P1-205ENST00000422088 832 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 VN1R10P-201ENST00000447106 875 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 NDUFA5P7-201ENST00000452914 242 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 HMGB1P30-201ENST00000492455 606 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 AC110760.3-202ENST00000515177 371 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 AP000763.2-201ENST00000540641 163 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 AC009712.1-201ENST00000564938 316 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 AC090517.2-201ENST00000614966 680 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 DLEU2_6.2-201ENST00000620994 136 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 CASC19-280ENST00000642102 1351 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 RNU6-252P-201ENST00000363232 107 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 RNU6-1210P-201ENST00000363775 107 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 RNU6-673P-201ENST00000365084 104 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 RNA5SP259-201ENST00000365541 109 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 RNU6-969P-201ENST00000383900 105 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 MIR29B2-201ENST00000385055 81 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 RNU6-564P-201ENST00000410983 104 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 HMGN2P34-201ENST00000437647 269 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 RNU6-390P-201ENST00000516259 103 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 RNU6-1183P-201ENST00000517054 60 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 MIR4637-201ENST00000582405 84 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 BNIP3P30-201ENST00000601184 574 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 AL596245.1-201ENST00000618994 362 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 MIR6755-201ENST00000619993 66 ntBASIC-0.05□□□□□ -2.42
CSPG4Q6UVK1 MTND4P5-201ENST00000435821 1374 ntBASIC-0.06□□□□□ -2.42
CSPG4Q6UVK1 MIR411-201ENST00000362239 96 ntBASIC-0.06□□□□□ -2.42
CSPG4Q6UVK1 SNORA16.2-201ENST00000390991 127 ntBASIC-0.06□□□□□ -2.42
CSPG4Q6UVK1 COX6CP10-201ENST00000416832 224 ntBASIC-0.06□□□□□ -2.42
CSPG4Q6UVK1 ARL5AP1-201ENST00000418991 388 ntBASIC-0.06□□□□□ -2.42
CSPG4Q6UVK1 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.06□□□□□ -2.42
CSPG4Q6UVK1 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.06□□□□□ -2.42
CSPG4Q6UVK1 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.06□□□□□ -2.42
CSPG4Q6UVK1 OFD1P3Y-201ENST00000453312 783 ntBASIC-0.06□□□□□ -2.42
CSPG4Q6UVK1 MTND1P3-201ENST00000484956 952 ntBASIC-0.06□□□□□ -2.42
CSPG4Q6UVK1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.06□□□□□ -2.42
CSPG4Q6UVK1 AC022868.1-201ENST00000517767 391 ntBASIC-0.06□□□□□ -2.42
CSPG4Q6UVK1 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC-0.06□□□□□ -2.42
CSPG4Q6UVK1 MRPS36P5-201ENST00000551909 298 ntBASIC-0.06□□□□□ -2.42
CSPG4Q6UVK1 AC022022.2-201ENST00000602989 360 ntBASIC-0.06□□□□□ -2.42
CSPG4Q6UVK1 AL592221.1-201ENST00000605266 382 ntBASIC-0.06□□□□□ -2.42
CSPG4Q6UVK1 AC013476.2-201ENST00000614456 459 ntBASIC-0.06□□□□□ -2.42
CSPG4Q6UVK1 MIR1248-201ENST00000629190 106 ntBASIC-0.06□□□□□ -2.42
CSPG4Q6UVK1 MTND5P32-201ENST00000560711 1802 ntBASIC-0.06□□□□□ -2.42
CSPG4Q6UVK1 RNU6-657P-201ENST00000383904 107 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 RNU6-432P-201ENST00000384196 109 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 RNU6-793P-201ENST00000384233 104 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 MIR186-201ENST00000384988 86 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 MIR548B-201ENST00000385247 97 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 TMSB4XP8-201ENST00000402089 135 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 RNA5SP451-201ENST00000410588 110 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 TMSB4XP6-201ENST00000415187 135 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 RNU1-131P-201ENST00000458943 161 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 AC022493.2-201ENST00000506122 481 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 MTND2P33-201ENST00000506452 1031 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 RNU6-416P-201ENST00000516265 103 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 AC091163.3-201ENST00000518269 1144 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 VN1R83P-201ENST00000595685 445 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 AC018926.1-201ENST00000616335 435 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 AC068647.2-201ENST00000637380 353 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 AC112487.2-201ENST00000637950 304 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 AC119674.1-220ENST00000641502 1048 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 AC010615.1-201ENST00000594254 1764 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 RNU6-877P-201ENST00000383868 107 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 RNU6-637P-201ENST00000384050 107 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 RNU6-1274P-201ENST00000384557 107 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 SNORA75.2-201ENST00000391138 150 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 SNORA75.3-201ENST00000391231 150 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 AC002381.1-201ENST00000447049 280 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 AC008628.1-201ENST00000508663 265 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 VN1R88P-201ENST00000596787 292 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms