Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.26□□□□□ -2.37
CCDC171Q6TFL3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.26□□□□□ -2.37
CCDC171Q6TFL3 AL157871.3-201ENST00000557231 293 ntBASIC0.26□□□□□ -2.37
CCDC171Q6TFL3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.26□□□□□ -2.37
CCDC171Q6TFL3 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
CCDC171Q6TFL3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.26□□□□□ -2.37
CCDC171Q6TFL3 RPL21P136-201ENST00000605378 396 ntBASIC0.26□□□□□ -2.37
CCDC171Q6TFL3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.26□□□□□ -2.37
CCDC171Q6TFL3 AL159152.1-201ENST00000635019 2587 ntBASIC0.26□□□□□ -2.37
CCDC171Q6TFL3 Y_RNA.33-201ENST00000362591 102 ntBASIC0.25□□□□□ -2.37
CCDC171Q6TFL3 SNORA63.3-201ENST00000362682 132 ntBASIC0.25□□□□□ -2.37
CCDC171Q6TFL3 SNORA4.2-201ENST00000365313 147 ntBASIC0.25□□□□□ -2.37
CCDC171Q6TFL3 RNU6-72P-201ENST00000384285 79 ntBASIC0.25□□□□□ -2.37
CCDC171Q6TFL3 MIR1197-201ENST00000408818 88 ntBASIC0.25□□□□□ -2.37
CCDC171Q6TFL3 MTCO3P41-201ENST00000414801 328 ntBASIC0.25□□□□□ -2.37
CCDC171Q6TFL3 BX664727.1-201ENST00000416024 466 ntBASIC0.25□□□□□ -2.37
CCDC171Q6TFL3 ELOCP9-201ENST00000418624 239 ntBASIC0.25□□□□□ -2.37
CCDC171Q6TFL3 USP9YP14-201ENST00000430663 563 ntBASIC0.25□□□□□ -2.37
CCDC171Q6TFL3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.25□□□□□ -2.37
CCDC171Q6TFL3 GAPDHP17-201ENST00000449858 1001 ntBASIC0.25□□□□□ -2.37
CCDC171Q6TFL3 AL122001.1-201ENST00000457027 370 ntBASIC0.25□□□□□ -2.37
CCDC171Q6TFL3 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.25□□□□□ -2.37
CCDC171Q6TFL3 MTND2P33-201ENST00000506452 1031 ntBASIC0.25□□□□□ -2.37
CCDC171Q6TFL3 AC104072.1-201ENST00000568817 668 ntBASIC0.25□□□□□ -2.37
CCDC171Q6TFL3 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.25□□□□□ -2.37
CCDC171Q6TFL3 Y_RNA.85-201ENST00000363014 111 ntBASIC0.24□□□□□ -2.37
CCDC171Q6TFL3 SNORA75B-201ENST00000384053 137 ntBASIC0.24□□□□□ -2.37
CCDC171Q6TFL3 RNU6-348P-201ENST00000384386 107 ntBASIC0.24□□□□□ -2.37
CCDC171Q6TFL3 RNU6-278P-201ENST00000390945 109 ntBASIC0.24□□□□□ -2.37
CCDC171Q6TFL3 SNORA12-201ENST00000391162 147 ntBASIC0.24□□□□□ -2.37
CCDC171Q6TFL3 MIR1305-201ENST00000408300 86 ntBASIC0.24□□□□□ -2.37
CCDC171Q6TFL3 BTF3L4P1-201ENST00000413813 468 ntBASIC0.24□□□□□ -2.37
CCDC171Q6TFL3 RPS3AP37-201ENST00000419176 745 ntBASIC0.24□□□□□ -2.37
CCDC171Q6TFL3 EEF1E1P1-201ENST00000446998 430 ntBASIC0.24□□□□□ -2.37
CCDC171Q6TFL3 RNU6-1225P-201ENST00000516336 65 ntBASIC0.24□□□□□ -2.37
CCDC171Q6TFL3 AC023050.2-201ENST00000544968 387 ntBASIC0.24□□□□□ -2.37
CCDC171Q6TFL3 MIR4709-201ENST00000577272 72 ntBASIC0.24□□□□□ -2.37
CCDC171Q6TFL3 AL109933.3-201ENST00000619095 188 ntBASIC0.24□□□□□ -2.37
CCDC171Q6TFL3 AC009509.4-201ENST00000619202 509 ntBASIC0.24□□□□□ -2.37
CCDC171Q6TFL3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.24□□□□□ -2.37
CCDC171Q6TFL3 MTND5P33-201ENST00000571250 1450 ntBASIC0.23□□□□□ -2.37
CCDC171Q6TFL3 MTND4P14-201ENST00000435799 1354 ntBASIC0.23□□□□□ -2.37
CCDC171Q6TFL3 RNU6-853P-201ENST00000364306 107 ntBASIC0.23□□□□□ -2.37
CCDC171Q6TFL3 Y_RNA.363-201ENST00000365529 113 ntBASIC0.23□□□□□ -2.37
CCDC171Q6TFL3 Y_RNA.408-201ENST00000383987 102 ntBASIC0.23□□□□□ -2.37
CCDC171Q6TFL3 AF228730.1-201ENST00000397972 663 ntBASIC0.23□□□□□ -2.37
CCDC171Q6TFL3 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.23□□□□□ -2.37
CCDC171Q6TFL3 AC011233.1-201ENST00000422812 283 ntBASIC0.23□□□□□ -2.37
CCDC171Q6TFL3 ZNF886P-201ENST00000450781 723 ntBASIC0.23□□□□□ -2.37
CCDC171Q6TFL3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.23□□□□□ -2.37
CCDC171Q6TFL3 RPL39P38-201ENST00000467018 153 ntBASIC0.23□□□□□ -2.37
CCDC171Q6TFL3 RNU6-914P-201ENST00000516749 109 ntBASIC0.23□□□□□ -2.37
CCDC171Q6TFL3 AC021451.1-201ENST00000523498 1129 ntBASIC0.23□□□□□ -2.37
CCDC171Q6TFL3 MTCO3P15-201ENST00000526563 574 ntBASIC0.23□□□□□ -2.37
CCDC171Q6TFL3 MIR5708-201ENST00000579723 85 ntBASIC0.23□□□□□ -2.37
CCDC171Q6TFL3 AC004987.4-201ENST00000603383 338 ntBASIC0.23□□□□□ -2.37
CCDC171Q6TFL3 AL138726.1-201ENST00000614873 333 ntBASIC0.23□□□□□ -2.37
CCDC171Q6TFL3 AC126177.8-201ENST00000618339 1015 ntBASIC0.23□□□□□ -2.37
CCDC171Q6TFL3 PCMTD1P7-201ENST00000634506 357 ntBASIC0.23□□□□□ -2.37
CCDC171Q6TFL3 MTND5P42-201ENST00000637720 498 ntBASIC0.23□□□□□ -2.37
CCDC171Q6TFL3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.23□□□□□ -2.37
CCDC171Q6TFL3 SNORD56.1-201ENST00000362913 68 ntBASIC0.22□□□□□ -2.37
CCDC171Q6TFL3 RNU6-438P-201ENST00000365561 103 ntBASIC0.22□□□□□ -2.37
CCDC171Q6TFL3 RNU6-969P-201ENST00000383900 105 ntBASIC0.22□□□□□ -2.37
CCDC171Q6TFL3 SNORA12.2-201ENST00000391040 156 ntBASIC0.22□□□□□ -2.37
CCDC171Q6TFL3 Y_RNA.623-201ENST00000411128 95 ntBASIC0.22□□□□□ -2.37
CCDC171Q6TFL3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.22□□□□□ -2.37
CCDC171Q6TFL3 AL035398.1-201ENST00000430869 322 ntBASIC0.22□□□□□ -2.37
CCDC171Q6TFL3 AC069257.2-201ENST00000441819 155 ntBASIC0.22□□□□□ -2.37
CCDC171Q6TFL3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.22□□□□□ -2.37
CCDC171Q6TFL3 AL139824.2-201ENST00000458731 1095 ntBASIC0.22□□□□□ -2.37
CCDC171Q6TFL3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.22□□□□□ -2.37
CCDC171Q6TFL3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.22□□□□□ -2.37
CCDC171Q6TFL3 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.22□□□□□ -2.37
CCDC171Q6TFL3 AC121161.1-201ENST00000510606 652 ntBASIC0.22□□□□□ -2.37
CCDC171Q6TFL3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.22□□□□□ -2.37
CCDC171Q6TFL3 DEFB131D-201ENST00000526803 184 ntBASIC0.22□□□□□ -2.37
CCDC171Q6TFL3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.22□□□□□ -2.37
CCDC171Q6TFL3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
CCDC171Q6TFL3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
CCDC171Q6TFL3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.21□□□□□ -2.38
CCDC171Q6TFL3 MTCO2P12-201ENST00000427426 682 ntBASIC0.21□□□□□ -2.38
CCDC171Q6TFL3 SUMO2P5-201ENST00000506790 245 ntBASIC0.21□□□□□ -2.38
CCDC171Q6TFL3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.21□□□□□ -2.38
CCDC171Q6TFL3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.21□□□□□ -2.38
CCDC171Q6TFL3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.21□□□□□ -2.38
CCDC171Q6TFL3 AP003327.1-201ENST00000529684 127 ntBASIC0.21□□□□□ -2.38
CCDC171Q6TFL3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.21□□□□□ -2.38
CCDC171Q6TFL3 SNORA59B-202ENST00000578183 701 ntBASIC0.21□□□□□ -2.38
CCDC171Q6TFL3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.21□□□□□ -2.38
CCDC171Q6TFL3 AC022893.3-201ENST00000607665 437 ntBASIC0.21□□□□□ -2.38
CCDC171Q6TFL3 AC073544.1-201ENST00000600110 1595 ntBASIC0.21□□□□□ -2.38
CCDC171Q6TFL3 RNU6-1123P-201ENST00000362347 106 ntBASIC0.2□□□□□ -2.38
CCDC171Q6TFL3 RNU4-15P-201ENST00000362613 141 ntBASIC0.2□□□□□ -2.38
CCDC171Q6TFL3 RNU6-395P-201ENST00000365662 106 ntBASIC0.2□□□□□ -2.38
CCDC171Q6TFL3 RNU6-45P-201ENST00000384471 107 ntBASIC0.2□□□□□ -2.38
CCDC171Q6TFL3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.2□□□□□ -2.38
CCDC171Q6TFL3 RNA5SP127-201ENST00000411051 133 ntBASIC0.2□□□□□ -2.38
CCDC171Q6TFL3 MTCO1P21-201ENST00000416634 589 ntBASIC0.2□□□□□ -2.38
CCDC171Q6TFL3 AC092423.1-201ENST00000430165 186 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms