Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 SNORA80A-201ENST00000363922 136 ntBASIC4.3□□□□□ -1.72
USPL1Q5W0Q7 Y_RNA.230-201ENST00000364348 109 ntBASIC4.3□□□□□ -1.72
USPL1Q5W0Q7 RNU6-102P-201ENST00000384485 104 ntBASIC4.3□□□□□ -1.72
USPL1Q5W0Q7 YPEL5P1-201ENST00000419731 367 ntBASIC4.3□□□□□ -1.72
USPL1Q5W0Q7 BPY2DP-201ENST00000422208 265 ntBASIC4.3□□□□□ -1.72
USPL1Q5W0Q7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.3□□□□□ -1.72
USPL1Q5W0Q7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.3□□□□□ -1.72
USPL1Q5W0Q7 COX6CP14-201ENST00000469580 174 ntBASIC4.3□□□□□ -1.72
USPL1Q5W0Q7 RPS4XP22-201ENST00000480755 780 ntBASIC4.3□□□□□ -1.72
USPL1Q5W0Q7 AC006445.1-201ENST00000491925 405 ntBASIC4.3□□□□□ -1.72
USPL1Q5W0Q7 MIR2114-201ENST00000516645 80 ntBASIC4.3□□□□□ -1.72
USPL1Q5W0Q7 RNA5SP309-201ENST00000516670 106 ntBASIC4.3□□□□□ -1.72
USPL1Q5W0Q7 RNU6-58P-201ENST00000517143 103 ntBASIC4.3□□□□□ -1.72
USPL1Q5W0Q7 HIGD1AP1-201ENST00000550979 275 ntBASIC4.3□□□□□ -1.72
USPL1Q5W0Q7 AC026470.2-201ENST00000561492 181 ntBASIC4.3□□□□□ -1.72
USPL1Q5W0Q7 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USPL1Q5W0Q7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
USPL1Q5W0Q7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
USPL1Q5W0Q7 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
USPL1Q5W0Q7 AC006504.1-201ENST00000562493 3666 ntBASIC4.29□□□□□ -1.72
USPL1Q5W0Q7 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
USPL1Q5W0Q7 Y_RNA.44-201ENST00000362676 108 ntBASIC4.29□□□□□ -1.72
USPL1Q5W0Q7 RNU6-926P-201ENST00000384075 107 ntBASIC4.29□□□□□ -1.72
USPL1Q5W0Q7 SNORA1.3-201ENST00000384676 136 ntBASIC4.29□□□□□ -1.72
USPL1Q5W0Q7 SNORA26.3-201ENST00000391119 136 ntBASIC4.29□□□□□ -1.72
USPL1Q5W0Q7 AC073901.1-201ENST00000462471 408 ntBASIC4.29□□□□□ -1.72
USPL1Q5W0Q7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.29□□□□□ -1.72
USPL1Q5W0Q7 RNU2-31P-201ENST00000516954 155 ntBASIC4.29□□□□□ -1.72
USPL1Q5W0Q7 AC021739.1-201ENST00000559631 174 ntBASIC4.29□□□□□ -1.72
USPL1Q5W0Q7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.29□□□□□ -1.72
USPL1Q5W0Q7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.29□□□□□ -1.72
USPL1Q5W0Q7 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USPL1Q5W0Q7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.29□□□□□ -1.72
USPL1Q5W0Q7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
USPL1Q5W0Q7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USPL1Q5W0Q7 MFSD8-233ENST00000641482 4860 ntBASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 RNU6-378P-201ENST00000384324 107 ntBASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 Y_RNA.793-201ENST00000411222 111 ntBASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 MTCO1P5-201ENST00000433573 344 ntBASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 RPS29P31-201ENST00000446147 164 ntBASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 Y_RNA.644-201ENST00000459006 113 ntBASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 RNU5F-8P-201ENST00000515941 111 ntBASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 Y_RNA.674-201ENST00000516362 113 ntBASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 RNU6-567P-201ENST00000516746 107 ntBASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 CYCSP23-201ENST00000519781 313 ntBASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 AL033523.1-201ENST00000605153 153 ntBASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 ADAM3A-203ENST00000461344 2157 ntBASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 AL365361.1-201ENST00000566942 3481 ntBASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USPL1Q5W0Q7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
USPL1Q5W0Q7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 RNA5SP361-201ENST00000362686 118 ntBASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 Y_RNA.199-201ENST00000364014 102 ntBASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 RNU6-1145P-201ENST00000384246 107 ntBASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 RNU6-886P-201ENST00000384319 105 ntBASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 RNU6-21P-201ENST00000384710 107 ntBASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 AC099548.1-201ENST00000421443 426 ntBASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 WARS2P1-201ENST00000429678 537 ntBASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 AC244670.1-201ENST00000436879 112 ntBASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 AL392103.1-201ENST00000447000 198 ntBASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 AC117440.1-201ENST00000474107 571 ntBASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 RPL26P26-201ENST00000480251 434 ntBASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 RNU6-789P-201ENST00000517105 102 ntBASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 MIR5695-201ENST00000579717 85 ntBASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 MIR3609-201ENST00000582661 80 ntBASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 AC025946.2-201ENST00000603398 234 ntBASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 AC004825.2-201ENST00000616634 455 ntBASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 AC073308.1-201ENST00000623696 305 ntBASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USPL1Q5W0Q7 AC068647.1-201ENST00000489539 2265 ntBASIC4.26□□□□□ -1.73
USPL1Q5W0Q7 AF117829.1-206ENST00000621883 3802 ntBASIC4.26□□□□□ -1.73
USPL1Q5W0Q7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.26□□□□□ -1.73
USPL1Q5W0Q7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.26□□□□□ -1.73
USPL1Q5W0Q7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms