Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 SNORA18.1-201ENST00000363418 128 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 RNU6-741P-201ENST00000383889 107 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 MT-TC-201ENST00000387405 66 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 SNORD75.1-201ENST00000408373 60 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 RNU4-63P-201ENST00000411313 118 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 MED13P1-201ENST00000428342 171 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 RPL23AP50-201ENST00000434149 455 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 AC022364.2-201ENST00000457963 554 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 LINC01399-202ENST00000458450 244 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 RNA5SP269-201ENST00000459032 137 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 RPL36AP48-201ENST00000485521 314 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 MIR548Y-201ENST00000582739 110 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 RNU6-217P-201ENST00000384164 104 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 SMURF2P1-201ENST00000514992 481 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 RNU6-667P-201ENST00000517186 102 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 AC027288.2-201ENST00000553028 243 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 AC009318.4-201ENST00000620496 486 ntBASIC-0.36□□□□□ -2.47
VPS13DQ5THJ4 ZNF849P-201ENST00000594711 1566 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 AC003071.1-201ENST00000451219 789 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 MTCO3P10-201ENST00000455912 772 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 MTND1P3-201ENST00000484956 952 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 PTP4A1P4-201ENST00000512479 322 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 SUB1P2-201ENST00000556401 297 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 RMST_5.1-201ENST00000618704 126 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 AC090772.4-201ENST00000623599 362 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 MIR365A-201ENST00000362260 87 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 RNU6-1251P-201ENST00000364502 107 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 SNORD105-201ENST00000386910 85 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 COX6CP10-201ENST00000416832 224 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 AC119618.1-201ENST00000434191 222 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 AC098831.1-201ENST00000440661 216 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 AL049734.2-201ENST00000441066 616 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 RPS27AP8-201ENST00000452665 445 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 RBBP4P6-201ENST00000508098 202 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 SNORA70.12-201ENST00000516084 153 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 AC022616.2-201ENST00000523185 300 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 AC091152.3-201ENST00000604227 325 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 MTND5P16-201ENST00000460269 1703 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 AC010615.1-201ENST00000594254 1764 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 RNU7-165P-201ENST00000458864 60 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 AC111193.1-201ENST00000504097 155 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 AC131055.1-201ENST00000584626 316 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 AL357094.1-201ENST00000603845 844 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 AC242628.1-201ENST00000606810 391 ntBASIC-0.37□□□□□ -2.47
VPS13DQ5THJ4 RNU6-1243P-201ENST00000364028 107 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 RNU6-140P-201ENST00000384566 108 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 MIR760-201ENST00000390220 80 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AL034345.1-201ENST00000407768 123 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 TRAPPC13P1-201ENST00000435991 1062 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 ELOCP30-201ENST00000447108 299 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AC104689.1-201ENST00000473356 768 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AC067904.2-201ENST00000517322 1283 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 SNORD32A-201ENST00000364805 84 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AL096829.2-201ENST00000446582 742 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AC079354.2-201ENST00000453523 154 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AC010376.1-201ENST00000522101 334 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 DEFB108D-201ENST00000527787 222 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 MIR3612-201ENST00000579753 87 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 MIR4320-201ENST00000636981 65 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AC130509.1-201ENST00000464158 433 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AC104982.1-201ENST00000478775 574 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AC021146.9-201ENST00000512503 156 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AC105029.1-201ENST00000520250 669 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AP003716.2-201ENST00000528260 108 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 MIR3167-201ENST00000579623 85 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AL353765.1-201ENST00000605514 183 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AL162726.3-218ENST00000636401 95 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 SNORD114-11-201ENST00000363738 75 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AC006210.1-201ENST00000424882 111 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 C8orf59P1-201ENST00000429930 303 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 RPL17P35-201ENST00000432217 549 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AL392003.1-201ENST00000434394 243 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 MTCO3P2-201ENST00000457365 171 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 AC074133.1-201ENST00000515696 183 ntBASIC-0.38□□□□□ -2.47
VPS13DQ5THJ4 IL7-206ENST00000520269 456 ntTSL 3 BASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms