Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.7□□□□□ -1.66
CDCA8Q53HL2 AC010680.1-201ENST00000590024 3590 ntBASIC4.7□□□□□ -1.66
CDCA8Q53HL2 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.7□□□□□ -1.66
CDCA8Q53HL2 AC002543.1-201ENST00000299783 1954 ntBASIC4.69□□□□□ -1.66
CDCA8Q53HL2 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CDCA8Q53HL2 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDCA8Q53HL2 RNU6-290P-201ENST00000365212 101 ntBASIC4.69□□□□□ -1.66
CDCA8Q53HL2 RNU6-937P-201ENST00000384325 106 ntBASIC4.69□□□□□ -1.66
CDCA8Q53HL2 U3.19-201ENST00000390893 196 ntBASIC4.69□□□□□ -1.66
CDCA8Q53HL2 SNORD12B-201ENST00000410433 91 ntBASIC4.69□□□□□ -1.66
CDCA8Q53HL2 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.69□□□□□ -1.66
CDCA8Q53HL2 AL445305.1-201ENST00000432577 575 ntBASIC4.69□□□□□ -1.66
CDCA8Q53HL2 RPS4XP2-201ENST00000458402 793 ntBASIC4.69□□□□□ -1.66
CDCA8Q53HL2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.69□□□□□ -1.66
CDCA8Q53HL2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.69□□□□□ -1.66
CDCA8Q53HL2 MIR4276-201ENST00000584832 70 ntBASIC4.69□□□□□ -1.66
CDCA8Q53HL2 AC004944.1-201ENST00000517807 3059 ntBASIC4.69□□□□□ -1.66
CDCA8Q53HL2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.69□□□□□ -1.66
CDCA8Q53HL2 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
CDCA8Q53HL2 TNPO1P3-201ENST00000436471 2662 ntBASIC4.69□□□□□ -1.66
CDCA8Q53HL2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDCA8Q53HL2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDCA8Q53HL2 MIR208A-201ENST00000362287 71 ntBASIC4.68□□□□□ -1.66
CDCA8Q53HL2 SNORD27-201ENST00000363981 72 ntBASIC4.68□□□□□ -1.66
CDCA8Q53HL2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
CDCA8Q53HL2 RNU6-209P-201ENST00000384118 107 ntBASIC4.68□□□□□ -1.66
CDCA8Q53HL2 MIR329-1-201ENST00000385028 80 ntBASIC4.68□□□□□ -1.66
CDCA8Q53HL2 AC012306.1-201ENST00000423267 114 ntBASIC4.68□□□□□ -1.66
CDCA8Q53HL2 AC005300.1-201ENST00000428401 373 ntBASIC4.68□□□□□ -1.66
CDCA8Q53HL2 AC005326.1-201ENST00000429197 123 ntBASIC4.68□□□□□ -1.66
CDCA8Q53HL2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.68□□□□□ -1.66
CDCA8Q53HL2 AC005002.2-201ENST00000438228 269 ntBASIC4.68□□□□□ -1.66
CDCA8Q53HL2 AL161651.1-201ENST00000440882 223 ntBASIC4.68□□□□□ -1.66
CDCA8Q53HL2 AC007215.1-201ENST00000464893 276 ntBASIC4.68□□□□□ -1.66
CDCA8Q53HL2 RN7SL807P-201ENST00000470923 297 ntBASIC4.68□□□□□ -1.66
CDCA8Q53HL2 SERF1AP1-201ENST00000514575 187 ntBASIC4.68□□□□□ -1.66
CDCA8Q53HL2 AC107934.2-201ENST00000518653 310 ntBASIC4.68□□□□□ -1.66
CDCA8Q53HL2 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.68□□□□□ -1.66
CDCA8Q53HL2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.68□□□□□ -1.66
CDCA8Q53HL2 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.68□□□□□ -1.66
CDCA8Q53HL2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CDCA8Q53HL2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDCA8Q53HL2 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDCA8Q53HL2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDCA8Q53HL2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDCA8Q53HL2 Y_RNA.230-201ENST00000364348 109 ntBASIC4.67□□□□□ -1.66
CDCA8Q53HL2 RNU6-326P-201ENST00000365480 107 ntBASIC4.67□□□□□ -1.66
CDCA8Q53HL2 RNU6-748P-201ENST00000384648 107 ntBASIC4.67□□□□□ -1.66
CDCA8Q53HL2 AL033519.2-201ENST00000403958 392 ntBASIC4.67□□□□□ -1.66
CDCA8Q53HL2 RNU2-14P-201ENST00000411053 191 ntBASIC4.67□□□□□ -1.66
CDCA8Q53HL2 WARS2P1-201ENST00000429678 537 ntBASIC4.67□□□□□ -1.66
CDCA8Q53HL2 RNU7-23P-201ENST00000459465 62 ntBASIC4.67□□□□□ -1.66
CDCA8Q53HL2 RPL26P26-201ENST00000480251 434 ntBASIC4.67□□□□□ -1.66
CDCA8Q53HL2 RPL30P14-201ENST00000482744 348 ntBASIC4.67□□□□□ -1.66
CDCA8Q53HL2 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.67□□□□□ -1.66
CDCA8Q53HL2 MIR3136-201ENST00000583498 78 ntBASIC4.67□□□□□ -1.66
CDCA8Q53HL2 AC110741.2-201ENST00000605278 268 ntBASIC4.67□□□□□ -1.66
CDCA8Q53HL2 AL359198.2-201ENST00000611836 194 ntBASIC4.67□□□□□ -1.66
CDCA8Q53HL2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDCA8Q53HL2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.66□□□□□ -1.66
CDCA8Q53HL2 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDCA8Q53HL2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDCA8Q53HL2 SNORA70.4-201ENST00000365509 134 ntBASIC4.66□□□□□ -1.66
CDCA8Q53HL2 AC126124.2-201ENST00000413542 321 ntBASIC4.66□□□□□ -1.66
CDCA8Q53HL2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.66□□□□□ -1.66
CDCA8Q53HL2 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.66□□□□□ -1.66
CDCA8Q53HL2 HSPE1P25-201ENST00000455484 251 ntBASIC4.66□□□□□ -1.66
CDCA8Q53HL2 snoU13.28-201ENST00000459235 104 ntBASIC4.66□□□□□ -1.66
CDCA8Q53HL2 AP002884.2-201ENST00000471647 395 ntBASIC4.66□□□□□ -1.66
CDCA8Q53HL2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.66□□□□□ -1.66
CDCA8Q53HL2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.66□□□□□ -1.66
CDCA8Q53HL2 HMGN2P15-201ENST00000585707 270 ntBASIC4.66□□□□□ -1.66
CDCA8Q53HL2 AL356575.1-201ENST00000603008 283 ntBASIC4.66□□□□□ -1.66
CDCA8Q53HL2 AC010900.2-201ENST00000604508 210 ntBASIC4.66□□□□□ -1.66
CDCA8Q53HL2 AC073657.2-201ENST00000605661 303 ntBASIC4.66□□□□□ -1.66
CDCA8Q53HL2 RBBP8P1-201ENST00000449447 1844 ntBASIC4.66□□□□□ -1.66
CDCA8Q53HL2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDCA8Q53HL2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDCA8Q53HL2 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.66□□□□□ -1.66
CDCA8Q53HL2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDCA8Q53HL2 AC058791.1-201ENST00000608412 3198 ntBASIC4.65□□□□□ -1.66
CDCA8Q53HL2 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
CDCA8Q53HL2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.65□□□□□ -1.66
CDCA8Q53HL2 RNA5SP197-201ENST00000363357 119 ntBASIC4.65□□□□□ -1.67
CDCA8Q53HL2 RNA5SP120-201ENST00000410900 112 ntBASIC4.65□□□□□ -1.67
CDCA8Q53HL2 AC023141.4-201ENST00000412031 328 ntBASIC4.65□□□□□ -1.67
CDCA8Q53HL2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.65□□□□□ -1.67
CDCA8Q53HL2 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.65□□□□□ -1.67
CDCA8Q53HL2 AC096577.2-201ENST00000611455 153 ntBASIC4.65□□□□□ -1.67
CDCA8Q53HL2 AC005520.5-201ENST00000613926 164 ntBASIC4.65□□□□□ -1.67
CDCA8Q53HL2 AC011476.5-201ENST00000615594 130 ntBASIC4.65□□□□□ -1.67
CDCA8Q53HL2 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.65□□□□□ -1.67
CDCA8Q53HL2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.65□□□□□ -1.67
CDCA8Q53HL2 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDCA8Q53HL2 PWAR6-201ENST00000552334 4618 ntBASIC4.65□□□□□ -1.67
CDCA8Q53HL2 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CDCA8Q53HL2 HSPA8P1-201ENST00000425843 1833 ntBASIC4.65□□□□□ -1.67
CDCA8Q53HL2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.64□□□□□ -1.67
CDCA8Q53HL2 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.64□□□□□ -1.67
CDCA8Q53HL2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms