Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 Y_RNA.184-201ENST00000363884 108 ntBASIC2.8□□□□□ -1.96
CCDC38Q502W7 Y_RNA.303-201ENST00000364998 94 ntBASIC2.8□□□□□ -1.96
CCDC38Q502W7 RNU6-1274P-201ENST00000384557 107 ntBASIC2.8□□□□□ -1.96
CCDC38Q502W7 SNORA44-201ENST00000384584 132 ntBASIC2.8□□□□□ -1.96
CCDC38Q502W7 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CCDC38Q502W7 MIR548F5-201ENST00000408421 86 ntBASIC2.8□□□□□ -1.96
CCDC38Q502W7 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC38Q502W7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC38Q502W7 S100A11P2-201ENST00000467589 312 ntBASIC2.8□□□□□ -1.96
CCDC38Q502W7 AC103851.1-201ENST00000506833 274 ntBASIC2.8□□□□□ -1.96
CCDC38Q502W7 AC116337.1-201ENST00000509680 687 ntBASIC2.8□□□□□ -1.96
CCDC38Q502W7 MIR3923-201ENST00000579521 83 ntBASIC2.8□□□□□ -1.96
CCDC38Q502W7 UBE2V2P2-201ENST00000587677 504 ntBASIC2.8□□□□□ -1.96
CCDC38Q502W7 AL078605.1-201ENST00000603529 500 ntBASIC2.8□□□□□ -1.96
CCDC38Q502W7 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.8□□□□□ -1.96
CCDC38Q502W7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC38Q502W7 AL137790.1-201ENST00000634283 177 ntBASIC2.8□□□□□ -1.96
CCDC38Q502W7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC38Q502W7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CCDC38Q502W7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC38Q502W7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC38Q502W7 RNU6-593P-201ENST00000364716 112 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 Y_RNA.339-201ENST00000365325 102 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 RNU6-1286P-201ENST00000383871 107 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 RNU6-306P-201ENST00000384617 107 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 MIR561-201ENST00000385216 97 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 RNA5SP181-201ENST00000410246 98 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 RN7SKP158-201ENST00000410453 326 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 Z82205.1-201ENST00000428456 297 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 RPS3AP52-201ENST00000435639 297 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 AC025750.2-201ENST00000442609 450 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC38Q502W7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC38Q502W7 RN7SKP24-201ENST00000515888 284 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 SNORA31.11-201ENST00000516528 139 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 Y_RNA.691-201ENST00000516611 103 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 RNA5SP402-201ENST00000517148 110 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC38Q502W7 EIF4BP1-201ENST00000554881 351 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC38Q502W7 MIR4446-201ENST00000578505 67 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 MIR5194-201ENST00000582634 120 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 MIR4658-201ENST00000584344 65 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 Z98751.3-201ENST00000604447 521 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 TPTEP1-208ENST00000636884 213 ntBASIC2.79□□□□□ -1.96
CCDC38Q502W7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC38Q502W7 RNU6-596P-201ENST00000365395 98 ntBASIC2.78□□□□□ -1.96
CCDC38Q502W7 RNU6-968P-201ENST00000384076 107 ntBASIC2.78□□□□□ -1.96
CCDC38Q502W7 MTCYBP2-201ENST00000407745 171 ntBASIC2.78□□□□□ -1.96
CCDC38Q502W7 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC38Q502W7 AC145146.1-201ENST00000496370 254 ntBASIC2.78□□□□□ -1.96
CCDC38Q502W7 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.78□□□□□ -1.96
CCDC38Q502W7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.78□□□□□ -1.96
CCDC38Q502W7 CYP4A27P-201ENST00000567218 190 ntBASIC2.78□□□□□ -1.96
CCDC38Q502W7 MIR7106-201ENST00000612419 65 ntBASIC2.78□□□□□ -1.96
CCDC38Q502W7 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.78□□□□□ -1.96
CCDC38Q502W7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.78□□□□□ -1.96
CCDC38Q502W7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC38Q502W7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.97
CCDC38Q502W7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC38Q502W7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC38Q502W7 SNORA29-201ENST00000384183 140 ntBASIC2.77□□□□□ -1.97
CCDC38Q502W7 SNORA36A-201ENST00000384221 132 ntBASIC2.77□□□□□ -1.97
CCDC38Q502W7 RNA5SP210-201ENST00000391034 120 ntBASIC2.77□□□□□ -1.97
CCDC38Q502W7 AL591034.2-201ENST00000402839 359 ntBASIC2.77□□□□□ -1.97
CCDC38Q502W7 SNORA11.2-201ENST00000408318 127 ntBASIC2.77□□□□□ -1.97
CCDC38Q502W7 RPL37P10-201ENST00000412884 288 ntBASIC2.77□□□□□ -1.97
CCDC38Q502W7 EIF4EP2-201ENST00000422816 654 ntBASIC2.77□□□□□ -1.97
CCDC38Q502W7 AC012306.1-201ENST00000423267 114 ntBASIC2.77□□□□□ -1.97
CCDC38Q502W7 AC112220.1-201ENST00000434628 355 ntBASIC2.77□□□□□ -1.97
CCDC38Q502W7 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC38Q502W7 AL135938.1-201ENST00000443141 297 ntBASIC2.77□□□□□ -1.97
CCDC38Q502W7 MTND4P18-201ENST00000447010 465 ntBASIC2.77□□□□□ -1.97
CCDC38Q502W7 FTH1P25-201ENST00000447665 469 ntBASIC2.77□□□□□ -1.97
CCDC38Q502W7 SNORD5.1-201ENST00000458800 75 ntBASIC2.77□□□□□ -1.97
CCDC38Q502W7 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC38Q502W7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC38Q502W7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.77□□□□□ -1.97
CCDC38Q502W7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC38Q502W7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC38Q502W7 AC018630.3-201ENST00000542637 96 ntBASIC2.77□□□□□ -1.97
CCDC38Q502W7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC38Q502W7 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.77□□□□□ -1.97
CCDC38Q502W7 AC063943.3-201ENST00000615562 356 ntBASIC2.77□□□□□ -1.97
CCDC38Q502W7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.77□□□□□ -1.97
CCDC38Q502W7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC38Q502W7 AC080100.1-201ENST00000624239 5356 ntBASIC2.77□□□□□ -1.97
CCDC38Q502W7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC38Q502W7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC38Q502W7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC38Q502W7 SNORD50.1-201ENST00000362987 71 ntBASIC2.76□□□□□ -1.97
CCDC38Q502W7 RNU1-23P-201ENST00000363361 144 ntBASIC2.76□□□□□ -1.97
CCDC38Q502W7 RNU1-112P-201ENST00000364401 164 ntBASIC2.76□□□□□ -1.97
CCDC38Q502W7 RNY3P14-201ENST00000384309 102 ntBASIC2.76□□□□□ -1.97
CCDC38Q502W7 AL356432.1-201ENST00000405809 419 ntBASIC2.76□□□□□ -1.97
CCDC38Q502W7 RNA5SP201-201ENST00000410316 124 ntBASIC2.76□□□□□ -1.97
CCDC38Q502W7 Y_RNA.597-201ENST00000410463 100 ntBASIC2.76□□□□□ -1.97
CCDC38Q502W7 CBX3P6-201ENST00000430257 527 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms