Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 AC068587.5-201ENST00000528506 175 ntBASIC1.68□□□□□ -2.14
SF3A2Q15428 AP000763.2-201ENST00000540641 163 ntBASIC1.68□□□□□ -2.14
SF3A2Q15428 AC087883.1-201ENST00000551882 391 ntBASIC1.68□□□□□ -2.14
SF3A2Q15428 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.68□□□□□ -2.14
SF3A2Q15428 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.68□□□□□ -2.14
SF3A2Q15428 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.68□□□□□ -2.14
SF3A2Q15428 AC098848.2-201ENST00000588023 330 ntBASIC1.68□□□□□ -2.14
SF3A2Q15428 SNRPGP17-201ENST00000603780 214 ntBASIC1.68□□□□□ -2.14
SF3A2Q15428 AL078603.1-201ENST00000603824 313 ntBASIC1.68□□□□□ -2.14
SF3A2Q15428 U6.42-201ENST00000618440 107 ntBASIC1.68□□□□□ -2.14
SF3A2Q15428 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.68□□□□□ -2.14
SF3A2Q15428 AC099654.12-201ENST00000639868 649 ntBASIC1.68□□□□□ -2.14
SF3A2Q15428 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
SF3A2Q15428 HAUS6P2-201ENST00000433254 2404 ntBASIC1.68□□□□□ -2.14
SF3A2Q15428 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.68□□□□□ -2.14
SF3A2Q15428 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SF3A2Q15428 RNU6-655P-201ENST00000362858 107 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 RNU6-179P-201ENST00000363350 107 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 SNORA62.1-201ENST00000364287 154 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 Y_RNA.296-201ENST00000364930 108 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 RNU6-234P-201ENST00000365229 104 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 Y_RNA.367-201ENST00000365544 101 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 RPL21P1-201ENST00000399532 476 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 RNU2-32P-201ENST00000411193 191 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.67□□□□□ -2.14
SF3A2Q15428 AC133104.1-201ENST00000429100 218 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.67□□□□□ -2.14
SF3A2Q15428 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.67□□□□□ -2.14
SF3A2Q15428 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.67□□□□□ -2.14
SF3A2Q15428 MTND1P1-201ENST00000445453 368 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 C1DP4-201ENST00000455429 424 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 SRRM1P2-201ENST00000464531 1192 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 HMGN1P7-201ENST00000491722 313 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 AC108078.1-201ENST00000508073 725 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 AC104806.1-201ENST00000508720 308 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 MTND3P25-201ENST00000509243 135 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 RNA5SP480-201ENST00000516840 109 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.67□□□□□ -2.14
SF3A2Q15428 AC016957.1-201ENST00000534895 309 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.67□□□□□ -2.14
SF3A2Q15428 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.67□□□□□ -2.14
SF3A2Q15428 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.67□□□□□ -2.14
SF3A2Q15428 SNORD53B-201ENST00000577887 78 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 AC243960.4-201ENST00000600532 288 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 RMST_2.1-201ENST00000617263 136 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 AC026585.1-201ENST00000619582 524 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 MIR6734-201ENST00000621166 68 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 AC068792.1-201ENST00000621354 417 ntBASIC1.67□□□□□ -2.14
SF3A2Q15428 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.67□□□□□ -2.14
SF3A2Q15428 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.67□□□□□ -2.14
SF3A2Q15428 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SF3A2Q15428 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
SF3A2Q15428 AC006026.1-201ENST00000444025 1803 ntBASIC1.66□□□□□ -2.14
SF3A2Q15428 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
SF3A2Q15428 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SF3A2Q15428 RNU6-212P-201ENST00000362642 104 ntBASIC1.66□□□□□ -2.14
SF3A2Q15428 RNU6-181P-201ENST00000363225 107 ntBASIC1.66□□□□□ -2.14
SF3A2Q15428 RNU6-371P-201ENST00000364283 108 ntBASIC1.66□□□□□ -2.14
SF3A2Q15428 SNORA16.1-201ENST00000364597 132 ntBASIC1.66□□□□□ -2.14
SF3A2Q15428 SNORD115-7-201ENST00000365306 82 ntBASIC1.66□□□□□ -2.14
SF3A2Q15428 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SF3A2Q15428 MTCO2P11-201ENST00000431069 680 ntBASIC1.66□□□□□ -2.14
SF3A2Q15428 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.66□□□□□ -2.14
SF3A2Q15428 AC132479.1-201ENST00000449160 144 ntBASIC1.66□□□□□ -2.14
SF3A2Q15428 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.66□□□□□ -2.14
SF3A2Q15428 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.66□□□□□ -2.14
SF3A2Q15428 AC092436.3-201ENST00000511788 257 ntBASIC1.66□□□□□ -2.14
SF3A2Q15428 RNU6-506P-201ENST00000516553 94 ntBASIC1.66□□□□□ -2.14
SF3A2Q15428 RNU6-445P-201ENST00000516949 107 ntBASIC1.66□□□□□ -2.14
SF3A2Q15428 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.66□□□□□ -2.14
SF3A2Q15428 AC007375.1-201ENST00000554513 578 ntBASIC1.66□□□□□ -2.14
SF3A2Q15428 AC073539.2-201ENST00000597113 165 ntBASIC1.66□□□□□ -2.14
SF3A2Q15428 AL158209.2-201ENST00000619266 216 ntBASIC1.66□□□□□ -2.14
SF3A2Q15428 SCARNA4-202ENST00000625402 129 ntBASIC1.66□□□□□ -2.14
SF3A2Q15428 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.66□□□□□ -2.14
SF3A2Q15428 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.66□□□□□ -2.14
SF3A2Q15428 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
SF3A2Q15428 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
SF3A2Q15428 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.65□□□□□ -2.14
SF3A2Q15428 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.65□□□□□ -2.15
SF3A2Q15428 OR4G2P-201ENST00000328113 903 ntBASIC1.65□□□□□ -2.15
SF3A2Q15428 Y_RNA.6-201ENST00000362350 114 ntBASIC1.65□□□□□ -2.15
SF3A2Q15428 RNU6-1210P-201ENST00000363775 107 ntBASIC1.65□□□□□ -2.15
SF3A2Q15428 RNU6-944P-201ENST00000364023 107 ntBASIC1.65□□□□□ -2.15
SF3A2Q15428 RNU6-517P-201ENST00000384362 110 ntBASIC1.65□□□□□ -2.15
SF3A2Q15428 MIR1262-201ENST00000408276 93 ntBASIC1.65□□□□□ -2.15
SF3A2Q15428 RNU6-648P-201ENST00000410190 107 ntBASIC1.65□□□□□ -2.15
SF3A2Q15428 RNU2-23P-201ENST00000410545 195 ntBASIC1.65□□□□□ -2.15
SF3A2Q15428 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.65□□□□□ -2.15
SF3A2Q15428 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.65□□□□□ -2.15
SF3A2Q15428 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.65□□□□□ -2.15
SF3A2Q15428 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.65□□□□□ -2.15
SF3A2Q15428 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.65□□□□□ -2.15
SF3A2Q15428 RPS29P15-201ENST00000458329 171 ntBASIC1.65□□□□□ -2.15
SF3A2Q15428 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.65□□□□□ -2.15
SF3A2Q15428 AC010493.1-201ENST00000513479 292 ntBASIC1.65□□□□□ -2.15
SF3A2Q15428 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.65□□□□□ -2.15
SF3A2Q15428 SNORA43.2-201ENST00000516652 128 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms