Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 Y_RNA.121-201ENST00000363309 113 ntBASIC3.91□□□□□ -1.78
PCDH1Q08174 RNA5SP322-201ENST00000363617 119 ntBASIC3.91□□□□□ -1.78
PCDH1Q08174 RNU6-312P-201ENST00000364629 107 ntBASIC3.91□□□□□ -1.78
PCDH1Q08174 RNU6-1264P-201ENST00000383891 107 ntBASIC3.91□□□□□ -1.78
PCDH1Q08174 Y_RNA.412-201ENST00000384001 104 ntBASIC3.91□□□□□ -1.78
PCDH1Q08174 RNU6-748P-201ENST00000384648 107 ntBASIC3.91□□□□□ -1.78
PCDH1Q08174 RNU6-19P-201ENST00000384718 107 ntBASIC3.91□□□□□ -1.78
PCDH1Q08174 AL138878.1-201ENST00000405131 347 ntBASIC3.91□□□□□ -1.78
PCDH1Q08174 AC083863.1-201ENST00000438811 231 ntBASIC3.91□□□□□ -1.78
PCDH1Q08174 HMGN2P16-201ENST00000456802 261 ntBASIC3.91□□□□□ -1.78
PCDH1Q08174 Y_RNA.637-201ENST00000459424 114 ntBASIC3.91□□□□□ -1.78
PCDH1Q08174 AL049830.2-201ENST00000480072 201 ntBASIC3.91□□□□□ -1.78
PCDH1Q08174 SNORA31.9-201ENST00000516429 84 ntBASIC3.91□□□□□ -1.78
PCDH1Q08174 SNORD19.2-201ENST00000516978 73 ntBASIC3.91□□□□□ -1.78
PCDH1Q08174 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDH1Q08174 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PCDH1Q08174 AC091152.3-201ENST00000604227 325 ntBASIC3.91□□□□□ -1.78
PCDH1Q08174 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.91□□□□□ -1.78
PCDH1Q08174 AL034408.1-202ENST00000636088 415 ntBASIC3.91□□□□□ -1.78
PCDH1Q08174 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.91□□□□□ -1.78
PCDH1Q08174 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.9□□□□□ -1.78
PCDH1Q08174 AP001486.2-201ENST00000561652 5113 ntBASIC3.9□□□□□ -1.78
PCDH1Q08174 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.9□□□□□ -1.78
PCDH1Q08174 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.9□□□□□ -1.78
PCDH1Q08174 Y_RNA.23-201ENST00000362496 106 ntBASIC3.9□□□□□ -1.79
PCDH1Q08174 Y_RNA.415-201ENST00000384012 112 ntBASIC3.9□□□□□ -1.79
PCDH1Q08174 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
PCDH1Q08174 AL357075.1-201ENST00000404107 726 ntBASIC3.9□□□□□ -1.79
PCDH1Q08174 AL133475.1-201ENST00000404414 305 ntBASIC3.9□□□□□ -1.79
PCDH1Q08174 AL591034.1-201ENST00000407447 340 ntBASIC3.9□□□□□ -1.79
PCDH1Q08174 U3.40-201ENST00000408706 208 ntBASIC3.9□□□□□ -1.79
PCDH1Q08174 AC023141.4-201ENST00000412031 328 ntBASIC3.9□□□□□ -1.79
PCDH1Q08174 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDH1Q08174 RPS27AP9-201ENST00000477681 438 ntBASIC3.9□□□□□ -1.79
PCDH1Q08174 AC026402.1-201ENST00000513642 170 ntBASIC3.9□□□□□ -1.79
PCDH1Q08174 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.9□□□□□ -1.79
PCDH1Q08174 RNU6-436P-201ENST00000516171 114 ntBASIC3.9□□□□□ -1.79
PCDH1Q08174 RNU6-107P-201ENST00000516643 102 ntBASIC3.9□□□□□ -1.79
PCDH1Q08174 MIR2116-201ENST00000517221 80 ntBASIC3.9□□□□□ -1.79
PCDH1Q08174 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.9□□□□□ -1.79
PCDH1Q08174 TGIF1P1-201ENST00000558095 802 ntBASIC3.9□□□□□ -1.79
PCDH1Q08174 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.9□□□□□ -1.79
PCDH1Q08174 RPS15AP11-201ENST00000594193 385 ntBASIC3.9□□□□□ -1.79
PCDH1Q08174 RNU6-91P-201ENST00000607774 107 ntBASIC3.9□□□□□ -1.79
PCDH1Q08174 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDH1Q08174 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PCDH1Q08174 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PCDH1Q08174 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.9□□□□□ -1.79
PCDH1Q08174 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDH1Q08174 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDH1Q08174 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PCDH1Q08174 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PCDH1Q08174 Y_RNA.75-201ENST00000362927 97 ntBASIC3.89□□□□□ -1.79
PCDH1Q08174 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.89□□□□□ -1.79
PCDH1Q08174 Y_RNA.182-201ENST00000363880 111 ntBASIC3.89□□□□□ -1.79
PCDH1Q08174 RNU6-324P-201ENST00000363957 106 ntBASIC3.89□□□□□ -1.79
PCDH1Q08174 Y_RNA.400-201ENST00000383963 111 ntBASIC3.89□□□□□ -1.79
PCDH1Q08174 Y_RNA.497-201ENST00000384447 98 ntBASIC3.89□□□□□ -1.79
PCDH1Q08174 RNU1-89P-201ENST00000384592 164 ntBASIC3.89□□□□□ -1.79
PCDH1Q08174 MIR1251-201ENST00000408552 70 ntBASIC3.89□□□□□ -1.79
PCDH1Q08174 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDH1Q08174 AC005840.1-201ENST00000498412 377 ntBASIC3.89□□□□□ -1.79
PCDH1Q08174 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDH1Q08174 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.89□□□□□ -1.79
PCDH1Q08174 AC025627.2-201ENST00000576220 160 ntBASIC3.89□□□□□ -1.79
PCDH1Q08174 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.89□□□□□ -1.79
PCDH1Q08174 AC011471.1-201ENST00000585766 187 ntBASIC3.89□□□□□ -1.79
PCDH1Q08174 MIR6076-201ENST00000617521 113 ntBASIC3.89□□□□□ -1.79
PCDH1Q08174 MIR492-201ENST00000638676 116 ntBASIC3.89□□□□□ -1.79
PCDH1Q08174 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PCDH1Q08174 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDH1Q08174 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDH1Q08174 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDH1Q08174 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PCDH1Q08174 RNU6-454P-201ENST00000364292 107 ntBASIC3.88□□□□□ -1.79
PCDH1Q08174 Y_RNA.357-201ENST00000365487 109 ntBASIC3.88□□□□□ -1.79
PCDH1Q08174 Y_RNA.488-201ENST00000384403 102 ntBASIC3.88□□□□□ -1.79
PCDH1Q08174 RNU6-763P-201ENST00000390865 106 ntBASIC3.88□□□□□ -1.79
PCDH1Q08174 RNA5SP201-201ENST00000410316 124 ntBASIC3.88□□□□□ -1.79
PCDH1Q08174 RNU2-51P-201ENST00000410708 197 ntBASIC3.88□□□□□ -1.79
PCDH1Q08174 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.88□□□□□ -1.79
PCDH1Q08174 MRPL49P2-201ENST00000521066 465 ntBASIC3.88□□□□□ -1.79
PCDH1Q08174 CYCSP29-201ENST00000533731 318 ntBASIC3.88□□□□□ -1.79
PCDH1Q08174 YPEL5P3-201ENST00000547227 352 ntBASIC3.88□□□□□ -1.79
PCDH1Q08174 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDH1Q08174 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.88□□□□□ -1.79
PCDH1Q08174 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.88□□□□□ -1.79
PCDH1Q08174 PCGEM1.1-201ENST00000613431 131 ntBASIC3.88□□□□□ -1.79
PCDH1Q08174 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDH1Q08174 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDH1Q08174 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
PCDH1Q08174 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDH1Q08174 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PCDH1Q08174 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PCDH1Q08174 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.87□□□□□ -1.79
PCDH1Q08174 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PCDH1Q08174 ZNF962P-201ENST00000443465 3140 ntBASIC3.87□□□□□ -1.79
PCDH1Q08174 IPO8P1-201ENST00000455509 3109 ntBASIC3.87□□□□□ -1.79
PCDH1Q08174 RNU6-529P-201ENST00000363383 104 ntBASIC3.87□□□□□ -1.79
PCDH1Q08174 RNU4-84P-201ENST00000364200 139 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms