Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AP000797.1-201ENST00000478870 387 ntBASIC-0.84□□□□□ -2.54
TFF3Q07654 MTND1P3-201ENST00000484956 952 ntBASIC-0.84□□□□□ -2.54
TFF3Q07654 SNORA25.12-201ENST00000516202 82 ntBASIC-0.84□□□□□ -2.54
TFF3Q07654 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0.84□□□□□ -2.54
TFF3Q07654 AC011979.2-201ENST00000527568 352 ntBASIC-0.84□□□□□ -2.54
TFF3Q07654 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC-0.84□□□□□ -2.54
TFF3Q07654 AC025678.1-201ENST00000567861 338 ntBASIC-0.84□□□□□ -2.54
TFF3Q07654 AC122134.1-202ENST00000569111 1201 ntBASIC-0.84□□□□□ -2.54
TFF3Q07654 AL136317.1-201ENST00000612653 226 ntBASIC-0.84□□□□□ -2.54
TFF3Q07654 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.85□□□□□ -2.55
TFF3Q07654 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.85□□□□□ -2.55
TFF3Q07654 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.85□□□□□ -2.55
TFF3Q07654 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-0.85□□□□□ -2.55
TFF3Q07654 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.85□□□□□ -2.55
TFF3Q07654 AC023512.1-201ENST00000444513 499 ntBASIC-0.85□□□□□ -2.55
TFF3Q07654 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.85□□□□□ -2.55
TFF3Q07654 LRRC34P1-201ENST00000542742 915 ntBASIC-0.85□□□□□ -2.55
TFF3Q07654 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.85□□□□□ -2.55
TFF3Q07654 AC008759.3-201ENST00000613300 508 ntBASIC-0.85□□□□□ -2.55
TFF3Q07654 DBF4P1-201ENST00000412976 1892 ntBASIC-0.86□□□□□ -2.55
TFF3Q07654 SNORD114-6-201ENST00000364393 72 ntBASIC-0.86□□□□□ -2.55
TFF3Q07654 RPL22P22-201ENST00000395439 379 ntBASIC-0.86□□□□□ -2.55
TFF3Q07654 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.86□□□□□ -2.55
TFF3Q07654 AC111193.1-201ENST00000504097 155 ntBASIC-0.86□□□□□ -2.55
TFF3Q07654 AC079140.3-201ENST00000511111 550 ntBASIC-0.86□□□□□ -2.55
TFF3Q07654 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-0.86□□□□□ -2.55
TFF3Q07654 SNORD60.2-201ENST00000516883 86 ntBASIC-0.86□□□□□ -2.55
TFF3Q07654 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.86□□□□□ -2.55
TFF3Q07654 AL359697.1-201ENST00000624879 587 ntBASIC-0.86□□□□□ -2.55
TFF3Q07654 SNORA75.2-201ENST00000391138 150 ntBASIC-0.87□□□□□ -2.55
TFF3Q07654 SNORA75.3-201ENST00000391231 150 ntBASIC-0.87□□□□□ -2.55
TFF3Q07654 RNU6-284P-201ENST00000411105 106 ntBASIC-0.87□□□□□ -2.55
TFF3Q07654 AL139396.1-201ENST00000421137 167 ntBASIC-0.87□□□□□ -2.55
TFF3Q07654 MTCO2P34-201ENST00000421994 607 ntBASIC-0.87□□□□□ -2.55
TFF3Q07654 MTND2P5-201ENST00000432656 1006 ntBASIC-0.87□□□□□ -2.55
TFF3Q07654 ELOCP30-201ENST00000447108 299 ntBASIC-0.87□□□□□ -2.55
TFF3Q07654 ELOCP24-201ENST00000456370 334 ntBASIC-0.87□□□□□ -2.55
TFF3Q07654 AC022364.2-201ENST00000457963 554 ntBASIC-0.87□□□□□ -2.55
TFF3Q07654 AC026782.1-201ENST00000512952 449 ntBASIC-0.87□□□□□ -2.55
TFF3Q07654 MTCYBP43-201ENST00000513621 740 ntBASIC-0.87□□□□□ -2.55
TFF3Q07654 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.87□□□□□ -2.55
TFF3Q07654 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.87□□□□□ -2.55
TFF3Q07654 RNU6-91P-201ENST00000607774 107 ntBASIC-0.87□□□□□ -2.55
TFF3Q07654 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.88□□□□□ -2.55
TFF3Q07654 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.88□□□□□ -2.55
TFF3Q07654 MIR593-201ENST00000384856 100 ntBASIC-0.88□□□□□ -2.55
TFF3Q07654 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.88□□□□□ -2.55
TFF3Q07654 RNA5SP300-201ENST00000391197 107 ntBASIC-0.88□□□□□ -2.55
TFF3Q07654 BEND7P1-201ENST00000422058 457 ntBASIC-0.88□□□□□ -2.55
TFF3Q07654 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC-0.88□□□□□ -2.55
TFF3Q07654 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.88□□□□□ -2.55
TFF3Q07654 AC011005.2-201ENST00000487324 359 ntBASIC-0.88□□□□□ -2.55
TFF3Q07654 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.88□□□□□ -2.55
TFF3Q07654 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC-0.88□□□□□ -2.55
TFF3Q07654 AC097473.1-201ENST00000508142 408 ntBASIC-0.88□□□□□ -2.55
TFF3Q07654 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.88□□□□□ -2.55
TFF3Q07654 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC-0.88□□□□□ -2.55
TFF3Q07654 RNU6-488P-201ENST00000515918 99 ntBASIC-0.88□□□□□ -2.55
TFF3Q07654 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.88□□□□□ -2.55
TFF3Q07654 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-0.88□□□□□ -2.55
TFF3Q07654 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-0.88□□□□□ -2.55
TFF3Q07654 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.88□□□□□ -2.55
TFF3Q07654 AL596245.1-201ENST00000618994 362 ntBASIC-0.88□□□□□ -2.55
TFF3Q07654 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.88□□□□□ -2.55
TFF3Q07654 RNU6-98P-201ENST00000384173 107 ntBASIC-0.89□□□□□ -2.55
TFF3Q07654 RNU6-441P-201ENST00000384545 106 ntBASIC-0.89□□□□□ -2.55
TFF3Q07654 RNU6-1274P-201ENST00000384557 107 ntBASIC-0.89□□□□□ -2.55
TFF3Q07654 MIR892B-201ENST00000401279 77 ntBASIC-0.89□□□□□ -2.55
TFF3Q07654 MTCYBP10-201ENST00000424905 650 ntBASIC-0.89□□□□□ -2.55
TFF3Q07654 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC-0.89□□□□□ -2.55
TFF3Q07654 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.89□□□□□ -2.55
TFF3Q07654 AC023194.1-201ENST00000493084 308 ntBASIC-0.89□□□□□ -2.55
TFF3Q07654 AC027338.1-201ENST00000514840 825 ntBASIC-0.89□□□□□ -2.55
TFF3Q07654 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.89□□□□□ -2.55
TFF3Q07654 RNA5SP268-201ENST00000516828 124 ntBASIC-0.89□□□□□ -2.55
TFF3Q07654 RNU6-678P-201ENST00000516832 109 ntBASIC-0.89□□□□□ -2.55
TFF3Q07654 AF235103.2-201ENST00000525753 346 ntBASIC-0.89□□□□□ -2.55
TFF3Q07654 AP001981.2-201ENST00000603241 418 ntBASIC-0.89□□□□□ -2.55
TFF3Q07654 AC004853.1-201ENST00000604902 698 ntBASIC-0.89□□□□□ -2.55
TFF3Q07654 RNU6-87P-201ENST00000607561 108 ntBASIC-0.89□□□□□ -2.55
TFF3Q07654 AL133445.2-201ENST00000611191 527 ntBASIC-0.89□□□□□ -2.55
TFF3Q07654 AC107075.1-201ENST00000613695 314 ntBASIC-0.89□□□□□ -2.55
TFF3Q07654 RMST_4.1-201ENST00000616886 107 ntBASIC-0.89□□□□□ -2.55
TFF3Q07654 Y_RNA.18-201ENST00000362461 102 ntBASIC-0.9□□□□□ -2.55
TFF3Q07654 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.9□□□□□ -2.55
TFF3Q07654 SNORD114-12-201ENST00000365400 75 ntBASIC-0.9□□□□□ -2.55
TFF3Q07654 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.9□□□□□ -2.55
TFF3Q07654 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.9□□□□□ -2.55
TFF3Q07654 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.9□□□□□ -2.55
TFF3Q07654 MTND4P32-201ENST00000437189 1237 ntBASIC-0.9□□□□□ -2.55
TFF3Q07654 AC104332.1-201ENST00000440471 797 ntBASIC-0.9□□□□□ -2.55
TFF3Q07654 RNU7-56P-201ENST00000458744 62 ntBASIC-0.9□□□□□ -2.55
TFF3Q07654 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.9□□□□□ -2.55
TFF3Q07654 MTND4LP26-201ENST00000518144 282 ntBASIC-0.9□□□□□ -2.55
TFF3Q07654 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.9□□□□□ -2.55
TFF3Q07654 BNIP3P6-201ENST00000549284 499 ntBASIC-0.9□□□□□ -2.55
TFF3Q07654 AC027288.2-201ENST00000553028 243 ntBASIC-0.9□□□□□ -2.55
TFF3Q07654 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC-0.9□□□□□ -2.55
TFF3Q07654 AL157871.3-201ENST00000557231 293 ntBASIC-0.9□□□□□ -2.55
TFF3Q07654 AC093249.1-201ENST00000567049 203 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms