Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 AC005296.1-201ENST00000616145 209 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 AC099842.1-201ENST00000619919 596 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 AC009161.2-201ENST00000624626 138 ntBASIC1.85□□□□□ -2.11
CSTF1Q05048 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CSTF1Q05048 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CSTF1Q05048 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CSTF1Q05048 Y_RNA.559-201ENST00000384686 107 ntBASIC1.84□□□□□ -2.11
CSTF1Q05048 RNU6-293P-201ENST00000411259 106 ntBASIC1.84□□□□□ -2.11
CSTF1Q05048 AL669831.1-202ENST00000428504 417 ntBASIC1.84□□□□□ -2.11
CSTF1Q05048 GTF2IP13-201ENST00000438487 386 ntBASIC1.84□□□□□ -2.11
CSTF1Q05048 RNA5SP57-201ENST00000459463 123 ntBASIC1.84□□□□□ -2.11
CSTF1Q05048 RNU6-430P-201ENST00000517078 107 ntBASIC1.84□□□□□ -2.11
CSTF1Q05048 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.84□□□□□ -2.11
CSTF1Q05048 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.84□□□□□ -2.11
CSTF1Q05048 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.84□□□□□ -2.11
CSTF1Q05048 AC068790.2-201ENST00000602601 557 ntBASIC1.84□□□□□ -2.11
CSTF1Q05048 AC025449.1-201ENST00000603896 529 ntBASIC1.84□□□□□ -2.11
CSTF1Q05048 MIR502-201ENST00000606349 86 ntBASIC1.84□□□□□ -2.11
CSTF1Q05048 AL512598.1-201ENST00000610158 273 ntBASIC1.84□□□□□ -2.11
CSTF1Q05048 DUXAP9-208ENST00000622815 614 ntBASIC1.84□□□□□ -2.11
CSTF1Q05048 Z69720.2-201ENST00000624755 279 ntBASIC1.84□□□□□ -2.11
CSTF1Q05048 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.84□□□□□ -2.11
CSTF1Q05048 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CSTF1Q05048 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
CSTF1Q05048 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
CSTF1Q05048 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CSTF1Q05048 RNU6-428P-201ENST00000362942 107 ntBASIC1.83□□□□□ -2.12
CSTF1Q05048 Y_RNA.159-201ENST00000363674 87 ntBASIC1.83□□□□□ -2.12
CSTF1Q05048 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CSTF1Q05048 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.83□□□□□ -2.12
CSTF1Q05048 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.83□□□□□ -2.12
CSTF1Q05048 AC010975.2-201ENST00000427781 588 ntBASIC1.83□□□□□ -2.12
CSTF1Q05048 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.83□□□□□ -2.12
CSTF1Q05048 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.83□□□□□ -2.12
CSTF1Q05048 SCARNA18-201ENST00000459004 134 ntBASIC1.83□□□□□ -2.12
CSTF1Q05048 RNU7-95P-201ENST00000459222 64 ntBASIC1.83□□□□□ -2.12
CSTF1Q05048 RPL30P1-201ENST00000488676 339 ntBASIC1.83□□□□□ -2.12
CSTF1Q05048 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.83□□□□□ -2.12
CSTF1Q05048 AC091435.1-201ENST00000505442 584 ntBASIC1.83□□□□□ -2.12
CSTF1Q05048 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.83□□□□□ -2.12
CSTF1Q05048 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.83□□□□□ -2.12
CSTF1Q05048 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.83□□□□□ -2.12
CSTF1Q05048 AC091135.1-201ENST00000585943 307 ntBASIC1.83□□□□□ -2.12
CSTF1Q05048 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.83□□□□□ -2.12
CSTF1Q05048 AC087683.1-201ENST00000591187 441 ntBASIC1.83□□□□□ -2.12
CSTF1Q05048 AL391646.1-201ENST00000603860 190 ntBASIC1.83□□□□□ -2.12
CSTF1Q05048 AC012493.3-201ENST00000604494 112 ntBASIC1.83□□□□□ -2.12
CSTF1Q05048 AC123912.5-201ENST00000605470 343 ntBASIC1.83□□□□□ -2.12
CSTF1Q05048 AC002044.1-201ENST00000606707 158 ntBASIC1.83□□□□□ -2.12
CSTF1Q05048 AC104073.3-201ENST00000610942 955 ntBASIC1.83□□□□□ -2.12
CSTF1Q05048 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
CSTF1Q05048 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CSTF1Q05048 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.83□□□□□ -2.12
CSTF1Q05048 MTND4P14-201ENST00000435799 1354 ntBASIC1.83□□□□□ -2.12
CSTF1Q05048 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CSTF1Q05048 MIR29B2-201ENST00000385055 81 ntBASIC1.82□□□□□ -2.12
CSTF1Q05048 RNU6-780P-201ENST00000391030 104 ntBASIC1.82□□□□□ -2.12
CSTF1Q05048 MIR1294-201ENST00000408503 142 ntBASIC1.82□□□□□ -2.12
CSTF1Q05048 AL158823.1-201ENST00000418441 478 ntBASIC1.82□□□□□ -2.12
CSTF1Q05048 AL353193.1-201ENST00000421444 268 ntBASIC1.82□□□□□ -2.12
CSTF1Q05048 MTCO2P11-201ENST00000431069 680 ntBASIC1.82□□□□□ -2.12
CSTF1Q05048 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.82□□□□□ -2.12
CSTF1Q05048 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.82□□□□□ -2.12
CSTF1Q05048 AC007969.2-201ENST00000441891 191 ntBASIC1.82□□□□□ -2.12
CSTF1Q05048 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.82□□□□□ -2.12
CSTF1Q05048 PRELID3BP1-201ENST00000457142 540 ntBASIC1.82□□□□□ -2.12
CSTF1Q05048 AC079382.1-201ENST00000493346 557 ntBASIC1.82□□□□□ -2.12
CSTF1Q05048 RPS29P11-201ENST00000496507 171 ntBASIC1.82□□□□□ -2.12
CSTF1Q05048 AC107393.1-201ENST00000512403 346 ntBASIC1.82□□□□□ -2.12
CSTF1Q05048 RNU6-405P-201ENST00000516637 110 ntBASIC1.82□□□□□ -2.12
CSTF1Q05048 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CSTF1Q05048 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.82□□□□□ -2.12
CSTF1Q05048 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.82□□□□□ -2.12
CSTF1Q05048 AC024909.2-201ENST00000553035 286 ntBASIC1.82□□□□□ -2.12
CSTF1Q05048 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.82□□□□□ -2.12
CSTF1Q05048 AL096840.1-201ENST00000603287 93 ntBASIC1.82□□□□□ -2.12
CSTF1Q05048 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
CSTF1Q05048 AL773524.1-201ENST00000614065 229 ntBASIC1.82□□□□□ -2.12
CSTF1Q05048 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.82□□□□□ -2.12
CSTF1Q05048 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.82□□□□□ -2.12
CSTF1Q05048 U4.7-201ENST00000638126 106 ntBASIC1.82□□□□□ -2.12
CSTF1Q05048 AC068137.4-201ENST00000638485 296 ntBASIC1.82□□□□□ -2.12
CSTF1Q05048 ZNF680P1-201ENST00000436625 1469 ntBASIC1.82□□□□□ -2.12
CSTF1Q05048 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
CSTF1Q05048 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.81□□□□□ -2.12
CSTF1Q05048 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CSTF1Q05048 RNU6-105P-201ENST00000363909 104 ntBASIC1.81□□□□□ -2.12
CSTF1Q05048 RNU6-434P-201ENST00000384376 107 ntBASIC1.81□□□□□ -2.12
CSTF1Q05048 RNU6-606P-201ENST00000384721 111 ntBASIC1.81□□□□□ -2.12
CSTF1Q05048 SUMO2P12-201ENST00000405924 140 ntBASIC1.81□□□□□ -2.12
CSTF1Q05048 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.81□□□□□ -2.12
CSTF1Q05048 RPS15AP10-201ENST00000432472 382 ntBASIC1.81□□□□□ -2.12
CSTF1Q05048 AL451074.3-201ENST00000437709 472 ntBASIC1.81□□□□□ -2.12
CSTF1Q05048 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.81□□□□□ -2.12
CSTF1Q05048 AC245102.2-201ENST00000448956 180 ntBASIC1.81□□□□□ -2.12
CSTF1Q05048 HMGB3P17-201ENST00000504195 649 ntBASIC1.81□□□□□ -2.12
CSTF1Q05048 AC091133.4-201ENST00000511142 308 ntBASIC1.81□□□□□ -2.12
CSTF1Q05048 MTND3P5-201ENST00000512798 333 ntBASIC1.81□□□□□ -2.12
CSTF1Q05048 Y_RNA.655-201ENST00000515919 96 ntBASIC1.81□□□□□ -2.12
CSTF1Q05048 AP003072.2-201ENST00000527756 676 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms