Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 DEFB108A-201ENST00000530110 222 ntBASIC0.07□□□□□ -2.4
SSBP1Q04837 MIR4524B-201ENST00000581569 115 ntBASIC0.07□□□□□ -2.4
SSBP1Q04837 AC110760.3-201ENST00000598794 467 ntBASIC0.07□□□□□ -2.4
SSBP1Q04837 AL513534.2-201ENST00000603836 250 ntBASIC0.07□□□□□ -2.4
SSBP1Q04837 AC026741.1-201ENST00000605892 482 ntBASIC0.07□□□□□ -2.4
SSBP1Q04837 AC092354.1-201ENST00000606057 376 ntBASIC0.07□□□□□ -2.4
SSBP1Q04837 GHRLOS.1-201ENST00000610995 70 ntBASIC0.07□□□□□ -2.4
SSBP1Q04837 MIR8084-201ENST00000614105 89 ntBASIC0.07□□□□□ -2.4
SSBP1Q04837 AC106754.2-201ENST00000623006 233 ntBASIC0.07□□□□□ -2.4
SSBP1Q04837 RNU6-950P-201ENST00000384651 107 ntBASIC0.06□□□□□ -2.4
SSBP1Q04837 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
SSBP1Q04837 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
SSBP1Q04837 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.06□□□□□ -2.4
SSBP1Q04837 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.06□□□□□ -2.4
SSBP1Q04837 AC060773.1-201ENST00000421698 310 ntBASIC0.06□□□□□ -2.4
SSBP1Q04837 FO393414.1-201ENST00000428697 1184 ntBASIC0.06□□□□□ -2.4
SSBP1Q04837 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.06□□□□□ -2.4
SSBP1Q04837 AC007969.2-201ENST00000441891 191 ntBASIC0.06□□□□□ -2.4
SSBP1Q04837 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.06□□□□□ -2.4
SSBP1Q04837 AL606662.1-201ENST00000445763 553 ntBASIC0.06□□□□□ -2.4
SSBP1Q04837 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.06□□□□□ -2.4
SSBP1Q04837 AL049830.1-201ENST00000468034 425 ntBASIC0.06□□□□□ -2.4
SSBP1Q04837 AC090888.2-201ENST00000559765 1144 ntBASIC0.06□□□□□ -2.4
SSBP1Q04837 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.06□□□□□ -2.4
SSBP1Q04837 HMGN1P30-201ENST00000589286 268 ntBASIC0.06□□□□□ -2.4
SSBP1Q04837 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.06□□□□□ -2.4
SSBP1Q04837 CTHRC1P1-201ENST00000605383 469 ntBASIC0.06□□□□□ -2.4
SSBP1Q04837 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.06□□□□□ -2.4
SSBP1Q04837 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.06□□□□□ -2.4
SSBP1Q04837 AC023158.2-201ENST00000614876 543 ntBASIC0.06□□□□□ -2.4
SSBP1Q04837 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.06□□□□□ -2.4
SSBP1Q04837 AC024940.5-201ENST00000622889 474 ntBASIC0.06□□□□□ -2.4
SSBP1Q04837 AC100810.6-201ENST00000638068 285 ntBASIC0.06□□□□□ -2.4
SSBP1Q04837 MTND5P16-201ENST00000460269 1703 ntBASIC0.06□□□□□ -2.4
SSBP1Q04837 AC090625.1-201ENST00000357130 210 ntBASIC0.05□□□□□ -2.4
SSBP1Q04837 SNORD41-201ENST00000386967 70 ntBASIC0.05□□□□□ -2.4
SSBP1Q04837 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.05□□□□□ -2.4
SSBP1Q04837 MRPS36P1-201ENST00000421291 307 ntBASIC0.05□□□□□ -2.4
SSBP1Q04837 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.05□□□□□ -2.4
SSBP1Q04837 AL158053.1-201ENST00000441503 453 ntBASIC0.05□□□□□ -2.4
SSBP1Q04837 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.05□□□□□ -2.4
SSBP1Q04837 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
SSBP1Q04837 AC016925.1-201ENST00000458303 298 ntBASIC0.05□□□□□ -2.4
SSBP1Q04837 RNU7-90P-201ENST00000459216 62 ntBASIC0.05□□□□□ -2.4
SSBP1Q04837 MTCO3P9-201ENST00000506989 781 ntBASIC0.05□□□□□ -2.4
SSBP1Q04837 AC105313.1-201ENST00000509121 353 ntBASIC0.05□□□□□ -2.4
SSBP1Q04837 AC112206.3-201ENST00000514578 389 ntBASIC0.05□□□□□ -2.4
SSBP1Q04837 RNU6-677P-201ENST00000516914 101 ntBASIC0.05□□□□□ -2.4
SSBP1Q04837 MTND2P7-201ENST00000521337 640 ntBASIC0.05□□□□□ -2.4
SSBP1Q04837 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.05□□□□□ -2.4
SSBP1Q04837 AC109446.1-201ENST00000566172 220 ntBASIC0.05□□□□□ -2.4
SSBP1Q04837 AL138889.2-201ENST00000603883 242 ntBASIC0.05□□□□□ -2.4
SSBP1Q04837 AC069545.1-201ENST00000605671 358 ntBASIC0.05□□□□□ -2.4
SSBP1Q04837 SNORD31B-201ENST00000364977 69 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 RNU6-1327P-201ENST00000365302 105 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 SNORA36.2-201ENST00000384004 127 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 MIR544A-201ENST00000384855 91 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 MIR216A-201ENST00000385063 110 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 RNU6-278P-201ENST00000390945 109 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 RPL21P1-201ENST00000399532 476 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.04□□□□□ -2.4
SSBP1Q04837 AC010154.1-201ENST00000425857 269 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.04□□□□□ -2.4
SSBP1Q04837 NDUFB1P2-201ENST00000449477 176 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.04□□□□□ -2.4
SSBP1Q04837 RNU7-14P-201ENST00000459331 62 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.04□□□□□ -2.4
SSBP1Q04837 AP000797.1-201ENST00000478870 387 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.04□□□□□ -2.4
SSBP1Q04837 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.04□□□□□ -2.4
SSBP1Q04837 AC011406.1-201ENST00000512440 370 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
SSBP1Q04837 MTND3P5-201ENST00000512798 333 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 AC027338.1-201ENST00000514840 825 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 RNU6-856P-201ENST00000516959 98 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.04□□□□□ -2.4
SSBP1Q04837 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.04□□□□□ -2.4
SSBP1Q04837 MIR3146-201ENST00000580367 79 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 AC012507.3-201ENST00000603556 477 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 AL022154.1-201ENST00000604698 785 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 AL353149.1-201ENST00000610667 244 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 MIR6513-201ENST00000621188 64 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 AC131159.1-201ENST00000621854 213 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 CASC19-280ENST00000642102 1351 ntBASIC0.04□□□□□ -2.4
SSBP1Q04837 RNU6-1285P-201ENST00000363480 105 ntBASIC0.03□□□□□ -2.4
SSBP1Q04837 RNU5A-8P-201ENST00000364102 114 ntBASIC0.03□□□□□ -2.4
SSBP1Q04837 RNU6-877P-201ENST00000383868 107 ntBASIC0.03□□□□□ -2.4
SSBP1Q04837 RNU6-16P-201ENST00000384385 107 ntBASIC0.03□□□□□ -2.4
SSBP1Q04837 SNORD116-13-201ENST00000384408 92 ntBASIC0.03□□□□□ -2.4
SSBP1Q04837 RNA5SP109-201ENST00000391010 116 ntBASIC0.03□□□□□ -2.4
SSBP1Q04837 UBE2V1P15-201ENST00000407776 448 ntBASIC0.03□□□□□ -2.4
SSBP1Q04837 RPL22P18-201ENST00000417197 377 ntBASIC0.03□□□□□ -2.4
SSBP1Q04837 AL953862.1-201ENST00000423016 168 ntBASIC0.03□□□□□ -2.4
SSBP1Q04837 MTND5P2-201ENST00000442927 1142 ntBASIC0.03□□□□□ -2.4
SSBP1Q04837 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.03□□□□□ -2.4
SSBP1Q04837 AL353718.1-201ENST00000451028 517 ntBASIC0.03□□□□□ -2.4
SSBP1Q04837 AC007395.1-201ENST00000451333 677 ntBASIC0.03□□□□□ -2.4
SSBP1Q04837 TPRKBP1-201ENST00000456243 481 ntBASIC0.03□□□□□ -2.4
SSBP1Q04837 AL163973.1-201ENST00000484753 577 ntBASIC0.03□□□□□ -2.4
SSBP1Q04837 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms