Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MTND1P15-201ENST00000579262 949 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AC079610.2-201ENST00000604818 690 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 AC034229.4-201ENST00000607861 441 ntBASIC-0.06□□□□□ -2.42
HSPG2P98160 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-0.06□□□□□ -2.42
HSPG2P98160 MTND5P32-201ENST00000560711 1802 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 MIR525-201ENST00000384978 85 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 MIR140-201ENST00000385282 100 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 AL451046.2-201ENST00000403074 277 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 RNU4-27P-201ENST00000410889 139 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 MTCO1P21-201ENST00000416634 589 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 AL451054.2-201ENST00000420896 202 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 AC093422.3-201ENST00000428506 305 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 MTATP6P16-201ENST00000434543 526 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.07□□□□□ -2.42
HSPG2P98160 ELOCP24-201ENST00000456370 334 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 SNORA25.11-201ENST00000515935 105 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 RNU2-53P-201ENST00000516257 147 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 RNA5SP290-201ENST00000517133 127 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC-0.07□□□□□ -2.42
HSPG2P98160 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.07□□□□□ -2.42
HSPG2P98160 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC-0.07□□□□□ -2.42
HSPG2P98160 AC087685.1-201ENST00000587507 141 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC-0.07□□□□□ -2.42
HSPG2P98160 AL020997.3-201ENST00000602843 359 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 AC112220.2-201ENST00000605513 533 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 MTND1P37-201ENST00000636562 264 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 U6.99-201ENST00000637524 83 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
HSPG2P98160 RNU1-39P-201ENST00000383897 165 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 MTCO2P34-201ENST00000421994 607 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 DAP3P1-201ENST00000441522 278 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC-0.07□□□□□ -2.42
HSPG2P98160 SPINT5P-201ENST00000448174 155 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 AC010587.2-201ENST00000511727 448 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 RNU6-863P-201ENST00000515989 104 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 SNORD79.1-201ENST00000516069 84 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 RNU6-586P-201ENST00000517265 104 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.07□□□□□ -2.42
HSPG2P98160 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-0.07□□□□□ -2.42
HSPG2P98160 RNU4-5P-201ENST00000607255 135 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 AC117490.2-201ENST00000610042 594 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 AC078938.1-201ENST00000620993 318 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.07□□□□□ -2.42
HSPG2P98160 SNORD114-16-201ENST00000363044 70 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 RNU6-296P-201ENST00000384608 107 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 RNU6-754P-201ENST00000391166 107 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 AL357139.1-201ENST00000407792 426 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 AC123900.1-201ENST00000420390 96 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-0.07□□□□□ -2.42
HSPG2P98160 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.07□□□□□ -2.42
HSPG2P98160 AL606662.1-201ENST00000445763 553 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.07□□□□□ -2.42
HSPG2P98160 AP000763.2-201ENST00000540641 163 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 AL596245.1-201ENST00000618994 362 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 uc_338.36-201ENST00000622331 158 ntBASIC-0.07□□□□□ -2.42
HSPG2P98160 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
HSPG2P98160 RNU2-23P-201ENST00000410545 195 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.08□□□□□ -2.42
HSPG2P98160 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-0.08□□□□□ -2.42
HSPG2P98160 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.08□□□□□ -2.42
HSPG2P98160 LINC01399-202ENST00000458450 244 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 SRRM1P2-201ENST00000464531 1192 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC-0.08□□□□□ -2.42
HSPG2P98160 AL132657.2-201ENST00000564417 358 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AL353997.4-201ENST00000586196 166 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AC018926.1-201ENST00000616335 435 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AC104985.3-201ENST00000623479 597 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC-0.08□□□□□ -2.42
HSPG2P98160 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 RNU6-1010P-201ENST00000362757 107 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 RNU6-152P-201ENST00000384037 107 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 UBE2V1P11-201ENST00000411559 285 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 DNAJA1P2-201ENST00000421360 1197 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AC008267.5-201ENST00000424928 265 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 MTND1P20-201ENST00000430341 950 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AC245047.7-201ENST00000440265 293 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AC104332.1-201ENST00000440471 797 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AC002542.1-201ENST00000440683 193 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 RAD1P2-201ENST00000446414 663 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AC010469.2-201ENST00000496412 480 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AC113410.1-201ENST00000505029 247 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.08□□□□□ -2.42
HSPG2P98160 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.08□□□□□ -2.42
HSPG2P98160 AC093788.1-201ENST00000609356 927 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AC096586.1-201ENST00000610267 561 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AC092634.7-201ENST00000621022 103 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AL078595.3-201ENST00000623815 1166 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 SNORD99-201ENST00000408612 74 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 COX6CP10-201ENST00000416832 224 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-0.08□□□□□ -2.42
HSPG2P98160 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC-0.08□□□□□ -2.42
HSPG2P98160 MTCYBP40-201ENST00000509390 1135 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AC104136.1-201ENST00000512969 394 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 RNVU1-2-201ENST00000516326 135 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.08□□□□□ -2.42
HSPG2P98160 AC004217.3-201ENST00000551552 878 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AC090888.2-201ENST00000559765 1144 ntBASIC-0.08□□□□□ -2.42
HSPG2P98160 AC091805.2-201ENST00000603848 235 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms