Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC-0.11□□□□□ -2.43
PRKDCP78527 AC136618.2-201ENST00000575091 400 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.11□□□□□ -2.43
PRKDCP78527 MIR548AZ-201ENST00000616567 95 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 MIR103A2-201ENST00000362154 78 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 RNU6-529P-201ENST00000363383 104 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 AC010385.1-201ENST00000412374 256 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 MTCO1P21-201ENST00000416634 589 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 RAB11AP1-201ENST00000442978 646 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC-0.11□□□□□ -2.43
PRKDCP78527 VN1R88P-201ENST00000596787 292 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 AL031281.1-201ENST00000604049 488 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 AC092354.1-201ENST00000606057 376 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 AC242628.1-201ENST00000606810 391 ntBASIC-0.11□□□□□ -2.43
PRKDCP78527 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.11□□□□□ -2.43
PRKDCP78527 ZNF849P-201ENST00000594711 1566 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 RNU6-858P-201ENST00000362436 107 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 RNU6-1210P-201ENST00000363775 107 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 SNRPEP9-201ENST00000436794 238 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 AC245047.7-201ENST00000440265 293 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.12□□□□□ -2.43
PRKDCP78527 NDUFA5P7-201ENST00000452914 242 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 AC098869.1-201ENST00000481627 292 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 AKIRIN2P1-201ENST00000505898 352 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 AL157871.3-201ENST00000557231 293 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 AC079610.2-201ENST00000604818 690 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
PRKDCP78527 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-0.12□□□□□ -2.43
PRKDCP78527 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-0.12□□□□□ -2.43
PRKDCP78527 RNY4P16-201ENST00000364768 94 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 SUGT1P1-201ENST00000379514 476 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 AL161935.2-201ENST00000414627 60 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.12□□□□□ -2.43
PRKDCP78527 USP9YP22-201ENST00000438971 294 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 RAD1P2-201ENST00000446414 663 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 RNU7-94P-201ENST00000459576 63 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 RNU6-863P-201ENST00000515989 104 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.12□□□□□ -2.43
PRKDCP78527 AL353997.4-201ENST00000586196 166 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 AC007363.1-201ENST00000604736 620 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 AC117490.2-201ENST00000610042 594 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 AL136317.1-201ENST00000612653 226 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 MIR635-201ENST00000384830 98 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 AL109755.1-201ENST00000401791 649 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 MTATP6P23-201ENST00000440153 476 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 RNFT1P2-201ENST00000443064 757 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.12□□□□□ -2.43
PRKDCP78527 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC-0.12□□□□□ -2.43
PRKDCP78527 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.12□□□□□ -2.43
PRKDCP78527 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.12□□□□□ -2.43
PRKDCP78527 AP003465.2-201ENST00000602571 373 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 LARP7P1-201ENST00000605576 316 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 AC092634.7-201ENST00000621022 103 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 AL078595.3-201ENST00000623815 1166 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC-0.12□□□□□ -2.43
PRKDCP78527 AC119674.1-220ENST00000641502 1048 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 AL079343.1-201ENST00000572358 1771 ntBASIC-0.12□□□□□ -2.43
PRKDCP78527 RNU6-23P-201ENST00000363283 107 ntBASIC-0.13□□□□□ -2.43
PRKDCP78527 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.13□□□□□ -2.43
PRKDCP78527 MIR1283-2-201ENST00000408621 87 ntBASIC-0.13□□□□□ -2.43
PRKDCP78527 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC-0.13□□□□□ -2.43
PRKDCP78527 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-0.13□□□□□ -2.43
PRKDCP78527 AP000797.1-201ENST00000478870 387 ntBASIC-0.13□□□□□ -2.43
PRKDCP78527 MIR8076-201ENST00000611401 83 ntBASIC-0.13□□□□□ -2.43
PRKDCP78527 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
PRKDCP78527 RNA5SP300-201ENST00000391197 107 ntBASIC-0.13□□□□□ -2.43
PRKDCP78527 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
PRKDCP78527 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
PRKDCP78527 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.13□□□□□ -2.43
PRKDCP78527 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-0.13□□□□□ -2.43
PRKDCP78527 MTND2P4-201ENST00000445034 1004 ntBASIC-0.13□□□□□ -2.43
PRKDCP78527 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC-0.13□□□□□ -2.43
PRKDCP78527 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.13□□□□□ -2.43
PRKDCP78527 TPRKBP2-201ENST00000565969 475 ntBASIC-0.13□□□□□ -2.43
PRKDCP78527 MIR644A-201ENST00000385262 94 ntBASIC-0.13□□□□□ -2.43
PRKDCP78527 AC025449.1-201ENST00000603896 529 ntBASIC-0.13□□□□□ -2.43
PRKDCP78527 RNU6-619P-201ENST00000365146 108 ntBASIC-0.14□□□□□ -2.43
PRKDCP78527 RNU1-39P-201ENST00000383897 165 ntBASIC-0.14□□□□□ -2.43
PRKDCP78527 MIR106A-201ENST00000384870 81 ntBASIC-0.14□□□□□ -2.43
PRKDCP78527 AL034345.1-201ENST00000407768 123 ntBASIC-0.14□□□□□ -2.43
PRKDCP78527 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC-0.14□□□□□ -2.43
PRKDCP78527 MTATP6P30-201ENST00000443540 664 ntBASIC-0.14□□□□□ -2.43
PRKDCP78527 AC092001.1-201ENST00000453012 261 ntBASIC-0.14□□□□□ -2.43
PRKDCP78527 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.14□□□□□ -2.43
PRKDCP78527 AC093519.1-201ENST00000566109 298 ntBASIC-0.14□□□□□ -2.43
PRKDCP78527 AC064807.4-201ENST00000607201 407 ntBASIC-0.14□□□□□ -2.43
PRKDCP78527 SNORD114-19-201ENST00000363072 75 ntBASIC-0.14□□□□□ -2.43
PRKDCP78527 RNA5SP275-201ENST00000363936 118 ntBASIC-0.14□□□□□ -2.43
PRKDCP78527 MIR587-201ENST00000384845 96 ntBASIC-0.14□□□□□ -2.43
PRKDCP78527 AC093422.3-201ENST00000428506 305 ntBASIC-0.14□□□□□ -2.43
PRKDCP78527 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.14□□□□□ -2.43
PRKDCP78527 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.14□□□□□ -2.43
PRKDCP78527 SNORA25.12-201ENST00000516202 82 ntBASIC-0.14□□□□□ -2.43
PRKDCP78527 MIR3666-201ENST00000607845 111 ntBASIC-0.14□□□□□ -2.43
PRKDCP78527 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
PRKDCP78527 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.14□□□□□ -2.43
PRKDCP78527 RAC1P8-201ENST00000427086 527 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms