Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.55□□□□□ -2.16
CCNA1P78396 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CCNA1P78396 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.55□□□□□ -2.16
CCNA1P78396 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.55□□□□□ -2.16
CCNA1P78396 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.55□□□□□ -2.16
CCNA1P78396 AC021146.2-201ENST00000504736 556 ntBASIC1.55□□□□□ -2.16
CCNA1P78396 MTND3P25-201ENST00000509243 135 ntBASIC1.55□□□□□ -2.16
CCNA1P78396 RNU6-410P-201ENST00000517006 107 ntBASIC1.55□□□□□ -2.16
CCNA1P78396 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.55□□□□□ -2.16
CCNA1P78396 AC087883.1-201ENST00000551882 391 ntBASIC1.55□□□□□ -2.16
CCNA1P78396 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.55□□□□□ -2.16
CCNA1P78396 Z99289.3-201ENST00000605586 594 ntBASIC1.55□□□□□ -2.16
CCNA1P78396 AC138649.3-201ENST00000622154 254 ntBASIC1.55□□□□□ -2.16
CCNA1P78396 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CCNA1P78396 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CCNA1P78396 RNU6-414P-201ENST00000363705 104 ntBASIC1.54□□□□□ -2.16
CCNA1P78396 RNU6-371P-201ENST00000364283 108 ntBASIC1.54□□□□□ -2.16
CCNA1P78396 SNORD115-7-201ENST00000365306 82 ntBASIC1.54□□□□□ -2.16
CCNA1P78396 RNU6-203P-201ENST00000384038 104 ntBASIC1.54□□□□□ -2.16
CCNA1P78396 RNU6-1222P-201ENST00000384615 107 ntBASIC1.54□□□□□ -2.16
CCNA1P78396 RNU6-387P-201ENST00000411331 105 ntBASIC1.54□□□□□ -2.16
CCNA1P78396 AC009961.2-201ENST00000435771 251 ntBASIC1.54□□□□□ -2.16
CCNA1P78396 AL445567.1-201ENST00000439121 144 ntBASIC1.54□□□□□ -2.16
CCNA1P78396 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.54□□□□□ -2.16
CCNA1P78396 GAPDHP17-201ENST00000449858 1001 ntBASIC1.54□□□□□ -2.16
CCNA1P78396 AL162395.1-201ENST00000457882 422 ntBASIC1.54□□□□□ -2.16
CCNA1P78396 RNU1-131P-201ENST00000458943 161 ntBASIC1.54□□□□□ -2.16
CCNA1P78396 AC087477.1-201ENST00000465747 340 ntBASIC1.54□□□□□ -2.16
CCNA1P78396 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.54□□□□□ -2.16
CCNA1P78396 HMGN1P13-201ENST00000505795 138 ntBASIC1.54□□□□□ -2.16
CCNA1P78396 MTCO3P9-201ENST00000506989 781 ntBASIC1.54□□□□□ -2.16
CCNA1P78396 AC104806.1-201ENST00000508720 308 ntBASIC1.54□□□□□ -2.16
CCNA1P78396 Y_RNA.717-201ENST00000517106 92 ntBASIC1.54□□□□□ -2.16
CCNA1P78396 COPS8P3-201ENST00000526024 482 ntBASIC1.54□□□□□ -2.16
CCNA1P78396 MIR3169-201ENST00000578032 83 ntBASIC1.54□□□□□ -2.16
CCNA1P78396 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.54□□□□□ -2.16
CCNA1P78396 MIR98-201ENST00000606724 119 ntBASIC1.54□□□□□ -2.16
CCNA1P78396 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.54□□□□□ -2.16
CCNA1P78396 RMST_7.1-201ENST00000621935 268 ntBASIC1.54□□□□□ -2.16
CCNA1P78396 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
CCNA1P78396 RNU6-78P-201ENST00000362897 107 ntBASIC1.53□□□□□ -2.16
CCNA1P78396 RNU5E-7P-201ENST00000365290 117 ntBASIC1.53□□□□□ -2.16
CCNA1P78396 RNY1P14-201ENST00000384426 108 ntBASIC1.53□□□□□ -2.16
CCNA1P78396 RNU6-297P-201ENST00000384636 107 ntBASIC1.53□□□□□ -2.16
CCNA1P78396 RPL21P1-201ENST00000399532 476 ntBASIC1.53□□□□□ -2.16
CCNA1P78396 RNU6-1245P-201ENST00000411130 106 ntBASIC1.53□□□□□ -2.16
CCNA1P78396 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.53□□□□□ -2.16
CCNA1P78396 OR6C66P-201ENST00000414917 930 ntBASIC1.53□□□□□ -2.16
CCNA1P78396 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.53□□□□□ -2.16
CCNA1P78396 MTND2P4-201ENST00000445034 1004 ntBASIC1.53□□□□□ -2.16
CCNA1P78396 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.53□□□□□ -2.16
CCNA1P78396 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.53□□□□□ -2.16
CCNA1P78396 SNORA31.17-201ENST00000516953 127 ntBASIC1.53□□□□□ -2.16
CCNA1P78396 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.53□□□□□ -2.16
CCNA1P78396 AC084364.2-201ENST00000546924 395 ntBASIC1.53□□□□□ -2.16
CCNA1P78396 SUB1P4-201ENST00000566062 339 ntBASIC1.53□□□□□ -2.16
CCNA1P78396 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.53□□□□□ -2.16
CCNA1P78396 MIR3682-201ENST00000581338 84 ntBASIC1.53□□□□□ -2.16
CCNA1P78396 AC136443.5-201ENST00000603741 370 ntBASIC1.53□□□□□ -2.16
CCNA1P78396 PRR13P7-201ENST00000605538 430 ntBASIC1.53□□□□□ -2.16
CCNA1P78396 AP001506.1-201ENST00000615444 211 ntBASIC1.53□□□□□ -2.16
CCNA1P78396 AL603755.1-201ENST00000619504 163 ntBASIC1.53□□□□□ -2.16
CCNA1P78396 AC097372.5-201ENST00000623665 376 ntBASIC1.53□□□□□ -2.16
CCNA1P78396 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CCNA1P78396 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CCNA1P78396 FGF7P2-201ENST00000332473 296 ntBASIC1.52□□□□□ -2.17
CCNA1P78396 MIR1-2-201ENST00000384961 85 ntBASIC1.52□□□□□ -2.17
CCNA1P78396 MIR320A-201ENST00000385302 82 ntBASIC1.52□□□□□ -2.17
CCNA1P78396 RNU6-550P-201ENST00000391057 101 ntBASIC1.52□□□□□ -2.17
CCNA1P78396 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.52□□□□□ -2.17
CCNA1P78396 GPR143P-201ENST00000434155 205 ntBASIC1.52□□□□□ -2.17
CCNA1P78396 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.52□□□□□ -2.17
CCNA1P78396 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.52□□□□□ -2.17
CCNA1P78396 MTCYBP18-201ENST00000501056 747 ntBASIC1.52□□□□□ -2.17
CCNA1P78396 AC022447.4-201ENST00000504053 364 ntBASIC1.52□□□□□ -2.17
CCNA1P78396 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.52□□□□□ -2.17
CCNA1P78396 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.52□□□□□ -2.17
CCNA1P78396 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.52□□□□□ -2.17
CCNA1P78396 AC005741.1-201ENST00000511094 432 ntBASIC1.52□□□□□ -2.17
CCNA1P78396 SNORA18.6-201ENST00000516792 115 ntBASIC1.52□□□□□ -2.17
CCNA1P78396 AP002453.2-201ENST00000533503 320 ntBASIC1.52□□□□□ -2.17
CCNA1P78396 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.52□□□□□ -2.17
CCNA1P78396 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.52□□□□□ -2.17
CCNA1P78396 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.52□□□□□ -2.17
CCNA1P78396 MIR3660-201ENST00000584845 100 ntBASIC1.52□□□□□ -2.17
CCNA1P78396 AL078603.1-201ENST00000603824 313 ntBASIC1.52□□□□□ -2.17
CCNA1P78396 AP001485.1-201ENST00000604799 199 ntBASIC1.52□□□□□ -2.17
CCNA1P78396 AC064872.1-201ENST00000604823 1072 ntBASIC1.52□□□□□ -2.17
CCNA1P78396 RMST_4.1-201ENST00000616886 107 ntBASIC1.52□□□□□ -2.17
CCNA1P78396 AC091931.1-201ENST00000623488 728 ntBASIC1.52□□□□□ -2.17
CCNA1P78396 U6.114-201ENST00000636407 96 ntBASIC1.52□□□□□ -2.17
CCNA1P78396 MTND5P10-201ENST00000603719 1809 ntBASIC1.52□□□□□ -2.17
CCNA1P78396 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.51□□□□□ -2.17
CCNA1P78396 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CCNA1P78396 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CCNA1P78396 LINC02555-201ENST00000563933 1951 ntBASIC1.51□□□□□ -2.17
CCNA1P78396 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CCNA1P78396 RNU6-1287P-201ENST00000362914 107 ntBASIC1.51□□□□□ -2.17
CCNA1P78396 RNU6-1303P-201ENST00000364841 107 ntBASIC1.51□□□□□ -2.17
CCNA1P78396 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms