Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
YBX1P67809 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
YBX1P67809 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
YBX1P67809 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
YBX1P67809 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
YBX1P67809 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
YBX1P67809 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.58□□□□□ -1.84
YBX1P67809 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.58□□□□□ -1.84
YBX1P67809 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
YBX1P67809 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
YBX1P67809 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
YBX1P67809 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
YBX1P67809 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
YBX1P67809 RNA5SP51-201ENST00000364750 119 ntBASIC3.58□□□□□ -1.84
YBX1P67809 Y_RNA.343-201ENST00000365354 112 ntBASIC3.58□□□□□ -1.84
YBX1P67809 RNU6-1130P-201ENST00000365434 107 ntBASIC3.58□□□□□ -1.84
YBX1P67809 RNU1-73P-201ENST00000383971 164 ntBASIC3.58□□□□□ -1.84
YBX1P67809 MIR493-201ENST00000385254 89 ntBASIC3.58□□□□□ -1.84
YBX1P67809 AL357139.1-201ENST00000407792 426 ntBASIC3.58□□□□□ -1.84
YBX1P67809 AC093578.1-201ENST00000415219 368 ntBASIC3.58□□□□□ -1.84
YBX1P67809 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.58□□□□□ -1.84
YBX1P67809 AC007969.2-201ENST00000441891 191 ntBASIC3.58□□□□□ -1.84
YBX1P67809 AC125238.1-201ENST00000448842 249 ntBASIC3.58□□□□□ -1.84
YBX1P67809 RPL37P4-201ENST00000448908 268 ntBASIC3.58□□□□□ -1.84
YBX1P67809 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.58□□□□□ -1.84
YBX1P67809 snoU13.6-201ENST00000458785 104 ntBASIC3.58□□□□□ -1.84
YBX1P67809 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.58□□□□□ -1.84
YBX1P67809 RNU6-62P-201ENST00000516526 102 ntBASIC3.58□□□□□ -1.84
YBX1P67809 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.58□□□□□ -1.84
YBX1P67809 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.58□□□□□ -1.84
YBX1P67809 AC055872.1-201ENST00000570978 278 ntBASIC3.58□□□□□ -1.84
YBX1P67809 MIR5571-201ENST00000577998 113 ntBASIC3.58□□□□□ -1.84
YBX1P67809 MIR3200-201ENST00000580767 85 ntBASIC3.58□□□□□ -1.84
YBX1P67809 AC022441.3-201ENST00000605737 136 ntBASIC3.58□□□□□ -1.84
YBX1P67809 AL391261.4-201ENST00000616012 481 ntBASIC3.58□□□□□ -1.84
YBX1P67809 AC091895.1-201ENST00000624494 256 ntBASIC3.58□□□□□ -1.84
YBX1P67809 snoU18.1-201ENST00000629629 71 ntBASIC3.58□□□□□ -1.84
YBX1P67809 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.58□□□□□ -1.84
YBX1P67809 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
YBX1P67809 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.58□□□□□ -1.84
YBX1P67809 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
YBX1P67809 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.58□□□□□ -1.84
YBX1P67809 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.58□□□□□ -1.84
YBX1P67809 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
YBX1P67809 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
YBX1P67809 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
YBX1P67809 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.57□□□□□ -1.84
YBX1P67809 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
YBX1P67809 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
YBX1P67809 RNU6-1290P-201ENST00000362957 109 ntBASIC3.57□□□□□ -1.84
YBX1P67809 RNU6-873P-201ENST00000363833 107 ntBASIC3.57□□□□□ -1.84
YBX1P67809 SNORD115-8-201ENST00000363856 82 ntBASIC3.57□□□□□ -1.84
YBX1P67809 Y_RNA.272-201ENST00000364696 102 ntBASIC3.57□□□□□ -1.84
YBX1P67809 SNORA73.2-201ENST00000364946 201 ntBASIC3.57□□□□□ -1.84
YBX1P67809 SNORD115-38-201ENST00000365037 82 ntBASIC3.57□□□□□ -1.84
YBX1P67809 RNU1-100P-201ENST00000365255 165 ntBASIC3.57□□□□□ -1.84
YBX1P67809 RNU6-211P-201ENST00000384047 107 ntBASIC3.57□□□□□ -1.84
YBX1P67809 Y_RNA.497-201ENST00000384447 98 ntBASIC3.57□□□□□ -1.84
YBX1P67809 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
YBX1P67809 SNORA57.3-201ENST00000411095 141 ntBASIC3.57□□□□□ -1.84
YBX1P67809 RN7SKP53-201ENST00000411337 315 ntBASIC3.57□□□□□ -1.84
YBX1P67809 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.57□□□□□ -1.84
YBX1P67809 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.57□□□□□ -1.84
YBX1P67809 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.57□□□□□ -1.84
YBX1P67809 AC140059.1-201ENST00000489238 361 ntBASIC3.57□□□□□ -1.84
YBX1P67809 AC110768.1-201ENST00000509222 400 ntBASIC3.57□□□□□ -1.84
YBX1P67809 HMGB3P3-201ENST00000510526 400 ntBASIC3.57□□□□□ -1.84
YBX1P67809 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.57□□□□□ -1.84
YBX1P67809 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.57□□□□□ -1.84
YBX1P67809 CR383656.8-201ENST00000549046 145 ntBASIC3.57□□□□□ -1.84
YBX1P67809 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.57□□□□□ -1.84
YBX1P67809 MIR5187-201ENST00000583479 76 ntBASIC3.57□□□□□ -1.84
YBX1P67809 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.57□□□□□ -1.84
YBX1P67809 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.57□□□□□ -1.84
YBX1P67809 AC010999.1-201ENST00000611856 324 ntBASIC3.57□□□□□ -1.84
YBX1P67809 uc_338.32-201ENST00000615087 172 ntBASIC3.57□□□□□ -1.84
YBX1P67809 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.57□□□□□ -1.84
YBX1P67809 U2.21-201ENST00000637295 81 ntBASIC3.57□□□□□ -1.84
YBX1P67809 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.57□□□□□ -1.84
YBX1P67809 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
YBX1P67809 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
YBX1P67809 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
YBX1P67809 AC007656.2-201ENST00000624902 4547 ntBASIC3.56□□□□□ -1.84
YBX1P67809 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
YBX1P67809 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
YBX1P67809 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.56□□□□□ -1.84
YBX1P67809 TNPO1P3-201ENST00000436471 2662 ntBASIC3.56□□□□□ -1.84
YBX1P67809 RNU4-80P-201ENST00000363200 141 ntBASIC3.56□□□□□ -1.84
YBX1P67809 RNU6-778P-201ENST00000363269 103 ntBASIC3.56□□□□□ -1.84
YBX1P67809 RNA5SP197-201ENST00000363357 119 ntBASIC3.56□□□□□ -1.84
YBX1P67809 RNU6-22P-201ENST00000384355 107 ntBASIC3.56□□□□□ -1.84
YBX1P67809 RNU6-417P-201ENST00000384712 107 ntBASIC3.56□□□□□ -1.84
YBX1P67809 MIR3074-201ENST00000384885 81 ntBASIC3.56□□□□□ -1.84
YBX1P67809 RNA5SP424-201ENST00000390988 115 ntBASIC3.56□□□□□ -1.84
YBX1P67809 RNU6-1154P-201ENST00000391001 104 ntBASIC3.56□□□□□ -1.84
YBX1P67809 Y_RNA.580-201ENST00000391004 95 ntBASIC3.56□□□□□ -1.84
YBX1P67809 FTH1P15-201ENST00000406984 280 ntBASIC3.56□□□□□ -1.84
YBX1P67809 RNU5E-9P-201ENST00000411164 104 ntBASIC3.56□□□□□ -1.84
YBX1P67809 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.56□□□□□ -1.84
YBX1P67809 RPL26P27-201ENST00000414397 437 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms