Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 MIR4272-201ENST00000635924 64 ntBASIC2.25□□□□□ -2.05
LMO4P61968 AC110491.1-201ENST00000562191 2010 ntBASIC2.25□□□□□ -2.05
LMO4P61968 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
LMO4P61968 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
LMO4P61968 AC093831.2-201ENST00000624393 3427 ntBASIC2.24□□□□□ -2.05
LMO4P61968 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
LMO4P61968 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
LMO4P61968 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
LMO4P61968 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.24□□□□□ -2.05
LMO4P61968 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.24□□□□□ -2.05
LMO4P61968 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LMO4P61968 MIR412-201ENST00000362142 91 ntBASIC2.24□□□□□ -2.05
LMO4P61968 RNU4-42P-201ENST00000364738 142 ntBASIC2.24□□□□□ -2.05
LMO4P61968 RNU6-301P-201ENST00000384277 107 ntBASIC2.24□□□□□ -2.05
LMO4P61968 Y_RNA.512-201ENST00000384518 102 ntBASIC2.24□□□□□ -2.05
LMO4P61968 RNU6-1222P-201ENST00000384615 107 ntBASIC2.24□□□□□ -2.05
LMO4P61968 MT-TG-201ENST00000387429 68 ntBASIC2.24□□□□□ -2.05
LMO4P61968 AL513475.1-201ENST00000406602 315 ntBASIC2.24□□□□□ -2.05
LMO4P61968 RNU6-101P-201ENST00000410323 104 ntBASIC2.24□□□□□ -2.05
LMO4P61968 Y_RNA.618-201ENST00000410949 107 ntBASIC2.24□□□□□ -2.05
LMO4P61968 AL096701.2-201ENST00000416920 238 ntBASIC2.24□□□□□ -2.05
LMO4P61968 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LMO4P61968 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.24□□□□□ -2.05
LMO4P61968 CBX3P6-201ENST00000430257 527 ntBASIC2.24□□□□□ -2.05
LMO4P61968 AC112220.1-201ENST00000434628 355 ntBASIC2.24□□□□□ -2.05
LMO4P61968 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LMO4P61968 AL583843.1-201ENST00000456070 346 ntBASIC2.24□□□□□ -2.05
LMO4P61968 RN7SL429P-201ENST00000479090 223 ntBASIC2.24□□□□□ -2.05
LMO4P61968 RN7SL489P-201ENST00000486185 223 ntBASIC2.24□□□□□ -2.05
LMO4P61968 RN7SL327P-201ENST00000488659 223 ntBASIC2.24□□□□□ -2.05
LMO4P61968 RPS27AP10-201ENST00000496103 208 ntBASIC2.24□□□□□ -2.05
LMO4P61968 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.24□□□□□ -2.05
LMO4P61968 ACA59.1-201ENST00000515966 143 ntBASIC2.24□□□□□ -2.05
LMO4P61968 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.24□□□□□ -2.05
LMO4P61968 HSBP1P1-201ENST00000555205 166 ntBASIC2.24□□□□□ -2.05
LMO4P61968 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.24□□□□□ -2.05
LMO4P61968 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.24□□□□□ -2.05
LMO4P61968 AL158827.2-201ENST00000602494 330 ntBASIC2.24□□□□□ -2.05
LMO4P61968 AC124312.5-201ENST00000604451 268 ntBASIC2.24□□□□□ -2.05
LMO4P61968 RN7SL853P-201ENST00000617250 223 ntBASIC2.24□□□□□ -2.05
LMO4P61968 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
LMO4P61968 AL691447.3-201ENST00000635020 330 ntBASIC2.24□□□□□ -2.05
LMO4P61968 IGHVIII-44-202ENST00000636235 289 ntBASIC2.24□□□□□ -2.05
LMO4P61968 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
LMO4P61968 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.23□□□□□ -2.05
LMO4P61968 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
LMO4P61968 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LMO4P61968 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.23□□□□□ -2.05
LMO4P61968 RPL9P7-201ENST00000330965 580 ntBASIC2.23□□□□□ -2.05
LMO4P61968 RNY1P16-201ENST00000363063 111 ntBASIC2.23□□□□□ -2.05
LMO4P61968 RNU6-778P-201ENST00000363269 103 ntBASIC2.23□□□□□ -2.05
LMO4P61968 RNA5SP68-201ENST00000363885 119 ntBASIC2.23□□□□□ -2.05
LMO4P61968 RNY3P11-201ENST00000364153 102 ntBASIC2.23□□□□□ -2.05
LMO4P61968 RNU6-1317P-201ENST00000364582 104 ntBASIC2.23□□□□□ -2.05
LMO4P61968 U8.8-201ENST00000365399 135 ntBASIC2.23□□□□□ -2.05
LMO4P61968 SNORA63.7-201ENST00000365579 123 ntBASIC2.23□□□□□ -2.05
LMO4P61968 RNU6-933P-201ENST00000384424 107 ntBASIC2.23□□□□□ -2.05
LMO4P61968 RNU6-658P-201ENST00000384606 106 ntBASIC2.23□□□□□ -2.05
LMO4P61968 Y_RNA.577-201ENST00000384794 101 ntBASIC2.23□□□□□ -2.05
LMO4P61968 MIR181A2-201ENST00000384863 110 ntBASIC2.23□□□□□ -2.05
LMO4P61968 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.23□□□□□ -2.05
LMO4P61968 Y_RNA.623-201ENST00000411128 95 ntBASIC2.23□□□□□ -2.05
LMO4P61968 SNORD56-201ENST00000413522 71 ntBASIC2.23□□□□□ -2.05
LMO4P61968 AL451074.5-201ENST00000415894 435 ntBASIC2.23□□□□□ -2.05
LMO4P61968 AL117339.3-201ENST00000418733 162 ntBASIC2.23□□□□□ -2.05
LMO4P61968 PGBD4P6-201ENST00000421501 610 ntBASIC2.23□□□□□ -2.05
LMO4P61968 BPY2DP-201ENST00000422208 265 ntBASIC2.23□□□□□ -2.05
LMO4P61968 AC104332.2-201ENST00000429959 156 ntBASIC2.23□□□□□ -2.05
LMO4P61968 RPS29P6-201ENST00000438196 145 ntBASIC2.23□□□□□ -2.05
LMO4P61968 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.23□□□□□ -2.05
LMO4P61968 RPL21P2-201ENST00000440049 481 ntBASIC2.23□□□□□ -2.05
LMO4P61968 AC098831.1-201ENST00000440661 216 ntBASIC2.23□□□□□ -2.05
LMO4P61968 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.23□□□□□ -2.05
LMO4P61968 RN7SL283P-201ENST00000489055 303 ntBASIC2.23□□□□□ -2.05
LMO4P61968 AC114801.2-201ENST00000503825 781 ntBASIC2.23□□□□□ -2.05
LMO4P61968 SNORA31.26-201ENST00000517250 137 ntBASIC2.23□□□□□ -2.05
LMO4P61968 AC025755.1-201ENST00000521306 278 ntBASIC2.23□□□□□ -2.05
LMO4P61968 AC131281.1-201ENST00000522984 164 ntBASIC2.23□□□□□ -2.05
LMO4P61968 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.23□□□□□ -2.05
LMO4P61968 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.23□□□□□ -2.05
LMO4P61968 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.23□□□□□ -2.05
LMO4P61968 MIR3605-201ENST00000583214 100 ntBASIC2.23□□□□□ -2.05
LMO4P61968 MIR5188-201ENST00000583467 113 ntBASIC2.23□□□□□ -2.05
LMO4P61968 AC009314.1-201ENST00000603871 304 ntBASIC2.23□□□□□ -2.05
LMO4P61968 MIR3199-2-201ENST00000636243 86 ntBASIC2.23□□□□□ -2.05
LMO4P61968 U2.21-201ENST00000637295 81 ntBASIC2.23□□□□□ -2.05
LMO4P61968 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.23□□□□□ -2.05
LMO4P61968 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LMO4P61968 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
LMO4P61968 ZNF72P-201ENST00000425869 1908 ntBASIC2.23□□□□□ -2.05
LMO4P61968 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
LMO4P61968 ADAM3A-203ENST00000461344 2157 ntBASIC2.22□□□□□ -2.05
LMO4P61968 Y_RNA.188-201ENST00000363952 111 ntBASIC2.22□□□□□ -2.05
LMO4P61968 Y_RNA.210-201ENST00000364161 110 ntBASIC2.22□□□□□ -2.05
LMO4P61968 RNU6-827P-201ENST00000365553 106 ntBASIC2.22□□□□□ -2.05
LMO4P61968 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
LMO4P61968 Y_RNA.424-201ENST00000384063 103 ntBASIC2.22□□□□□ -2.05
LMO4P61968 Y_RNA.533-201ENST00000384596 114 ntBASIC2.22□□□□□ -2.05
LMO4P61968 MIR10A-201ENST00000385043 110 ntBASIC2.22□□□□□ -2.05
LMO4P61968 RNU6-1109P-201ENST00000391187 107 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms