Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC120349.3-201ENST00000624377 529 ntBASIC1.44□□□□□ -2.18
VSX2P58304 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.44□□□□□ -2.18
VSX2P58304 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
VSX2P58304 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.43□□□□□ -2.18
VSX2P58304 Y_RNA.164-201ENST00000363709 102 ntBASIC1.43□□□□□ -2.18
VSX2P58304 SNORD32B-201ENST00000364460 84 ntBASIC1.43□□□□□ -2.18
VSX2P58304 MIR934-201ENST00000401241 83 ntBASIC1.43□□□□□ -2.18
VSX2P58304 RNU6-174P-201ENST00000410406 106 ntBASIC1.43□□□□□ -2.18
VSX2P58304 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
VSX2P58304 POLHP1-201ENST00000411806 470 ntBASIC1.43□□□□□ -2.18
VSX2P58304 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.43□□□□□ -2.18
VSX2P58304 CBX3P6-201ENST00000430257 527 ntBASIC1.43□□□□□ -2.18
VSX2P58304 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.43□□□□□ -2.18
VSX2P58304 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.43□□□□□ -2.18
VSX2P58304 AC132479.1-201ENST00000449160 144 ntBASIC1.43□□□□□ -2.18
VSX2P58304 HMGN2P18-201ENST00000450680 270 ntBASIC1.43□□□□□ -2.18
VSX2P58304 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.43□□□□□ -2.18
VSX2P58304 RNA5SP57-201ENST00000459463 123 ntBASIC1.43□□□□□ -2.18
VSX2P58304 AC145146.1-201ENST00000496370 254 ntBASIC1.43□□□□□ -2.18
VSX2P58304 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.43□□□□□ -2.18
VSX2P58304 SNORA31.24-201ENST00000517232 57 ntBASIC1.43□□□□□ -2.18
VSX2P58304 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
VSX2P58304 MIR5583-1-201ENST00000580941 59 ntBASIC1.43□□□□□ -2.18
VSX2P58304 BNIP3P25-201ENST00000596023 559 ntBASIC1.43□□□□□ -2.18
VSX2P58304 AC107304.1-201ENST00000604229 296 ntBASIC1.43□□□□□ -2.18
VSX2P58304 AC018889.1-201ENST00000605372 397 ntBASIC1.43□□□□□ -2.18
VSX2P58304 AL022345.1-201ENST00000607292 135 ntBASIC1.43□□□□□ -2.18
VSX2P58304 uc_338.5-201ENST00000611839 155 ntBASIC1.43□□□□□ -2.18
VSX2P58304 AC099842.1-201ENST00000619919 596 ntBASIC1.43□□□□□ -2.18
VSX2P58304 AC009161.2-201ENST00000624626 138 ntBASIC1.43□□□□□ -2.18
VSX2P58304 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.43□□□□□ -2.18
VSX2P58304 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
VSX2P58304 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
VSX2P58304 RNA5SP493-201ENST00000364115 91 ntBASIC1.42□□□□□ -2.18
VSX2P58304 Y_RNA.238-201ENST00000364441 102 ntBASIC1.42□□□□□ -2.18
VSX2P58304 RNU6-606P-201ENST00000384721 111 ntBASIC1.42□□□□□ -2.18
VSX2P58304 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
VSX2P58304 RNA5SP465-201ENST00000391195 109 ntBASIC1.42□□□□□ -2.18
VSX2P58304 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.42□□□□□ -2.18
VSX2P58304 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.42□□□□□ -2.18
VSX2P58304 AL354695.1-201ENST00000427935 228 ntBASIC1.42□□□□□ -2.18
VSX2P58304 Z82205.1-201ENST00000428456 297 ntBASIC1.42□□□□□ -2.18
VSX2P58304 AC133104.1-201ENST00000429100 218 ntBASIC1.42□□□□□ -2.18
VSX2P58304 MTCO2P11-201ENST00000431069 680 ntBASIC1.42□□□□□ -2.18
VSX2P58304 AC013470.1-201ENST00000453438 462 ntBASIC1.42□□□□□ -2.18
VSX2P58304 RNU1-98P-201ENST00000458992 160 ntBASIC1.42□□□□□ -2.18
VSX2P58304 AL163540.1-201ENST00000485382 386 ntBASIC1.42□□□□□ -2.18
VSX2P58304 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.42□□□□□ -2.18
VSX2P58304 AC091874.1-201ENST00000511402 339 ntBASIC1.42□□□□□ -2.18
VSX2P58304 Y_RNA.675-201ENST00000516389 149 ntBASIC1.42□□□□□ -2.18
VSX2P58304 AP001893.2-201ENST00000526949 202 ntBASIC1.42□□□□□ -2.18
VSX2P58304 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.42□□□□□ -2.18
VSX2P58304 TRAV32-201ENST00000553993 340 ntBASIC1.42□□□□□ -2.18
VSX2P58304 AC103996.1-201ENST00000555468 102 ntBASIC1.42□□□□□ -2.18
VSX2P58304 AC145350.1-201ENST00000567426 208 ntBASIC1.42□□□□□ -2.18
VSX2P58304 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.42□□□□□ -2.18
VSX2P58304 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.42□□□□□ -2.18
VSX2P58304 AC022418.1-201ENST00000624118 445 ntBASIC1.42□□□□□ -2.18
VSX2P58304 SNORD98-201ENST00000636377 67 ntBASIC1.42□□□□□ -2.18
VSX2P58304 MTND5P10-201ENST00000603719 1809 ntBASIC1.42□□□□□ -2.18
VSX2P58304 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
VSX2P58304 MIR126-201ENST00000362291 85 ntBASIC1.41□□□□□ -2.18
VSX2P58304 Y_RNA.159-201ENST00000363674 87 ntBASIC1.41□□□□□ -2.18
VSX2P58304 RNU4-13P-201ENST00000364019 141 ntBASIC1.41□□□□□ -2.18
VSX2P58304 SNORD32A-201ENST00000364805 84 ntBASIC1.41□□□□□ -2.18
VSX2P58304 RNU6-348P-201ENST00000384386 107 ntBASIC1.41□□□□□ -2.18
VSX2P58304 AC068050.1-201ENST00000394891 380 ntBASIC1.41□□□□□ -2.18
VSX2P58304 RNU4-46P-201ENST00000410818 138 ntBASIC1.41□□□□□ -2.18
VSX2P58304 UBE2V1P4-201ENST00000425374 344 ntBASIC1.41□□□□□ -2.18
VSX2P58304 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.41□□□□□ -2.18
VSX2P58304 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.41□□□□□ -2.18
VSX2P58304 USP9YP29-201ENST00000445112 563 ntBASIC1.41□□□□□ -2.18
VSX2P58304 C1DP4-201ENST00000455429 424 ntBASIC1.41□□□□□ -2.18
VSX2P58304 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.41□□□□□ -2.18
VSX2P58304 RNU7-95P-201ENST00000459222 64 ntBASIC1.41□□□□□ -2.18
VSX2P58304 AC079382.1-201ENST00000493346 557 ntBASIC1.41□□□□□ -2.18
VSX2P58304 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.41□□□□□ -2.18
VSX2P58304 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.41□□□□□ -2.18
VSX2P58304 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.41□□□□□ -2.18
VSX2P58304 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.41□□□□□ -2.18
VSX2P58304 MIR3169-201ENST00000578032 83 ntBASIC1.41□□□□□ -2.18
VSX2P58304 MTATP6P3-201ENST00000581686 676 ntBASIC1.41□□□□□ -2.18
VSX2P58304 AC040904.1-201ENST00000590850 223 ntBASIC1.41□□□□□ -2.18
VSX2P58304 AC110760.3-201ENST00000598794 467 ntBASIC1.41□□□□□ -2.18
VSX2P58304 AL034555.1-201ENST00000604816 211 ntBASIC1.41□□□□□ -2.18
VSX2P58304 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
VSX2P58304 AL590240.4-201ENST00000616908 390 ntBASIC1.41□□□□□ -2.18
VSX2P58304 AC022513.1-201ENST00000624512 117 ntBASIC1.41□□□□□ -2.18
VSX2P58304 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.41□□□□□ -2.18
VSX2P58304 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
VSX2P58304 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.18
VSX2P58304 AP000648.3-201ENST00000623539 4507 ntBASIC1.4□□□□□ -2.18
VSX2P58304 ZNF680P1-201ENST00000436625 1469 ntBASIC1.4□□□□□ -2.19
VSX2P58304 MIR340-201ENST00000362125 95 ntBASIC1.4□□□□□ -2.19
VSX2P58304 RNU4-91P-201ENST00000364778 135 ntBASIC1.4□□□□□ -2.19
VSX2P58304 RNU6-827P-201ENST00000365553 106 ntBASIC1.4□□□□□ -2.19
VSX2P58304 RNU6-903P-201ENST00000391270 109 ntBASIC1.4□□□□□ -2.19
VSX2P58304 RNA5SP100-201ENST00000410903 110 ntBASIC1.4□□□□□ -2.19
VSX2P58304 RNU6-321P-201ENST00000410912 106 ntBASIC1.4□□□□□ -2.19
VSX2P58304 RNA5SP59-201ENST00000410922 110 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms