Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 Y_RNA.638-201ENST00000459374 113 ntBASIC2.72□□□□□ -1.97
HDAC4P56524 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.72□□□□□ -1.97
HDAC4P56524 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.72□□□□□ -1.97
HDAC4P56524 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.72□□□□□ -1.97
HDAC4P56524 AC116337.1-201ENST00000509680 687 ntBASIC2.72□□□□□ -1.97
HDAC4P56524 RNA5SP112-201ENST00000515937 99 ntBASIC2.72□□□□□ -1.97
HDAC4P56524 RNA5SP282-201ENST00000516355 108 ntBASIC2.72□□□□□ -1.97
HDAC4P56524 APOOP3-201ENST00000536787 586 ntBASIC2.72□□□□□ -1.97
HDAC4P56524 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.72□□□□□ -1.97
HDAC4P56524 FRG2DP-202ENST00000566967 323 ntBASIC2.72□□□□□ -1.97
HDAC4P56524 BNIP3P16-201ENST00000589779 534 ntBASIC2.72□□□□□ -1.97
HDAC4P56524 RPS15AP11-201ENST00000594193 385 ntBASIC2.72□□□□□ -1.97
HDAC4P56524 AC096772.1-201ENST00000609146 564 ntBASIC2.72□□□□□ -1.97
HDAC4P56524 AC024581.2-201ENST00000619986 252 ntBASIC2.72□□□□□ -1.97
HDAC4P56524 AC241585.2-209ENST00000638217 143 ntBASIC2.72□□□□□ -1.97
HDAC4P56524 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HDAC4P56524 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
HDAC4P56524 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HDAC4P56524 RNU6-842P-201ENST00000384269 107 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 Y_RNA.482-201ENST00000384377 111 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 AL133475.1-201ENST00000404414 305 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 RNU6-293P-201ENST00000411259 106 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.71□□□□□ -1.98
HDAC4P56524 NUP35P1-201ENST00000422734 947 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 USP9YP30-201ENST00000430729 455 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.71□□□□□ -1.98
HDAC4P56524 AC108938.1-201ENST00000451204 136 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 SNORD5.1-201ENST00000458800 75 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 RPL9P9-202ENST00000466501 579 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 AC018437.1-201ENST00000492214 406 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 RPL22P13-201ENST00000493291 347 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 SNORA31.11-201ENST00000516528 139 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 SCARNA3-201ENST00000517097 143 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 AC109329.2-201ENST00000519658 482 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 CKS1BP7-201ENST00000522230 235 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 AC091544.4-201ENST00000555268 342 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 MIR4319-201ENST00000577285 85 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 AC090897.2-201ENST00000581715 130 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.71□□□□□ -1.98
HDAC4P56524 AC018462.2-201ENST00000605375 395 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 MIR3976-201ENST00000606807 139 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 AL449363.1-201ENST00000617815 186 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 MIR7843-201ENST00000622274 79 ntBASIC2.71□□□□□ -1.98
HDAC4P56524 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HDAC4P56524 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HDAC4P56524 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HDAC4P56524 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.71□□□□□ -1.98
HDAC4P56524 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HDAC4P56524 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HDAC4P56524 AC006026.1-201ENST00000444025 1803 ntBASIC2.7□□□□□ -1.98
HDAC4P56524 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HDAC4P56524 AC062016.1-201ENST00000355719 319 ntBASIC2.7□□□□□ -1.98
HDAC4P56524 RNU6-486P-201ENST00000363116 107 ntBASIC2.7□□□□□ -1.98
HDAC4P56524 Y_RNA.387-201ENST00000383918 102 ntBASIC2.7□□□□□ -1.98
HDAC4P56524 RNU6-601P-201ENST00000384540 107 ntBASIC2.7□□□□□ -1.98
HDAC4P56524 Y_RNA.535-201ENST00000384612 99 ntBASIC2.7□□□□□ -1.98
HDAC4P56524 RNA5SP210-201ENST00000391034 120 ntBASIC2.7□□□□□ -1.98
HDAC4P56524 RNA5SP390-201ENST00000410191 113 ntBASIC2.7□□□□□ -1.98
HDAC4P56524 AF228730.4-201ENST00000421457 183 ntBASIC2.7□□□□□ -1.98
HDAC4P56524 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.7□□□□□ -1.98
HDAC4P56524 AL133396.1-201ENST00000432048 687 ntBASIC2.7□□□□□ -1.98
HDAC4P56524 MICF-203ENST00000432679 129 ntBASIC2.7□□□□□ -1.98
HDAC4P56524 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.7□□□□□ -1.98
HDAC4P56524 AL031659.1-201ENST00000447075 539 ntBASIC2.7□□□□□ -1.98
HDAC4P56524 Y_RNA.635-201ENST00000459041 101 ntBASIC2.7□□□□□ -1.98
HDAC4P56524 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.7□□□□□ -1.98
HDAC4P56524 Y_RNA.670-201ENST00000516255 105 ntBASIC2.7□□□□□ -1.98
HDAC4P56524 Y_RNA.675-201ENST00000516389 149 ntBASIC2.7□□□□□ -1.98
HDAC4P56524 RNU6-1016P-201ENST00000516689 94 ntBASIC2.7□□□□□ -1.98
HDAC4P56524 RNU6-612P-201ENST00000516909 102 ntBASIC2.7□□□□□ -1.98
HDAC4P56524 RNU6-1213P-201ENST00000517075 94 ntBASIC2.7□□□□□ -1.98
HDAC4P56524 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.7□□□□□ -1.98
HDAC4P56524 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.7□□□□□ -1.98
HDAC4P56524 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.7□□□□□ -1.98
HDAC4P56524 MTND4LP32-201ENST00000636111 270 ntBASIC2.7□□□□□ -1.98
HDAC4P56524 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HDAC4P56524 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
HDAC4P56524 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.69□□□□□ -1.98
HDAC4P56524 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.69□□□□□ -1.98
HDAC4P56524 RNU6-1188P-201ENST00000363795 107 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 U8.8-201ENST00000365399 135 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 Y_RNA.404-201ENST00000383978 102 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 SNORA70B-201ENST00000384210 135 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 MIR504-201ENST00000385065 83 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 RNU6-370P-201ENST00000411008 104 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 AC138623.1-201ENST00000418060 216 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 BX276092.3-201ENST00000424182 230 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 AC063976.3-201ENST00000426849 329 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.69□□□□□ -1.98
HDAC4P56524 AC011753.1-201ENST00000451001 220 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.69□□□□□ -1.98
HDAC4P56524 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.69□□□□□ -1.98
HDAC4P56524 U8.21-201ENST00000459536 136 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 RPL36AP48-201ENST00000485521 314 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 AC090096.1-201ENST00000489168 390 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 AC096725.1-201ENST00000514266 313 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 RNU6-559P-201ENST00000516151 98 ntBASIC2.69□□□□□ -1.98
HDAC4P56524 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.69□□□□□ -1.98
HDAC4P56524 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.69□□□□□ -1.98
HDAC4P56524 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms