Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 U3.13-201ENST00000364804 214 ntBASIC2.6□□□□□ -1.99
CDH12P55289 SNORA29-201ENST00000384183 140 ntBASIC2.6□□□□□ -1.99
CDH12P55289 AC138623.1-201ENST00000418060 216 ntBASIC2.6□□□□□ -1.99
CDH12P55289 EIF1AXP1-201ENST00000419267 435 ntBASIC2.6□□□□□ -1.99
CDH12P55289 AL139281.1-201ENST00000422120 335 ntBASIC2.6□□□□□ -1.99
CDH12P55289 AL358075.3-201ENST00000426289 226 ntBASIC2.6□□□□□ -1.99
CDH12P55289 AC022018.1-201ENST00000430685 241 ntBASIC2.6□□□□□ -1.99
CDH12P55289 AL160004.2-201ENST00000432935 350 ntBASIC2.6□□□□□ -1.99
CDH12P55289 AC244670.1-201ENST00000436879 112 ntBASIC2.6□□□□□ -1.99
CDH12P55289 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.6□□□□□ -1.99
CDH12P55289 AC112771.1-201ENST00000463581 102 ntBASIC2.6□□□□□ -1.99
CDH12P55289 RPL31P41-201ENST00000477967 372 ntBASIC2.6□□□□□ -1.99
CDH12P55289 RPL23AP75-201ENST00000491601 451 ntBASIC2.6□□□□□ -1.99
CDH12P55289 SCGB1D5P-201ENST00000515134 247 ntBASIC2.6□□□□□ -1.99
CDH12P55289 RNU6-56P-201ENST00000516986 93 ntBASIC2.6□□□□□ -1.99
CDH12P55289 RNU6-988P-201ENST00000519081 107 ntBASIC2.6□□□□□ -1.99
CDH12P55289 AL590705.4-201ENST00000532209 134 ntBASIC2.6□□□□□ -1.99
CDH12P55289 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.6□□□□□ -1.99
CDH12P55289 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.6□□□□□ -1.99
CDH12P55289 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.6□□□□□ -1.99
CDH12P55289 AC004584.2-201ENST00000570407 410 ntBASIC2.6□□□□□ -1.99
CDH12P55289 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.6□□□□□ -1.99
CDH12P55289 RPL23AP88-201ENST00000605759 454 ntBASIC2.6□□□□□ -1.99
CDH12P55289 AC006157.1-201ENST00000611750 366 ntBASIC2.6□□□□□ -1.99
CDH12P55289 MIR1244-1-201ENST00000612829 85 ntBASIC2.6□□□□□ -1.99
CDH12P55289 uc_338.14-201ENST00000613162 166 ntBASIC2.6□□□□□ -1.99
CDH12P55289 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.6□□□□□ -1.99
CDH12P55289 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.6□□□□□ -1.99
CDH12P55289 MIR1244-3-201ENST00000635744 85 ntBASIC2.6□□□□□ -1.99
CDH12P55289 MIR1244-2-201ENST00000636449 85 ntBASIC2.6□□□□□ -1.99
CDH12P55289 MIR1244-4-202ENST00000636813 85 ntBASIC2.6□□□□□ -1.99
CDH12P55289 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CDH12P55289 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.6□□□□□ -1.99
CDH12P55289 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.6□□□□□ -1.99
CDH12P55289 AP003122.5-201ENST00000527668 3766 ntBASIC2.6□□□□□ -1.99
CDH12P55289 Z82195.2-201ENST00000612348 18351 ntBASIC2.6□□□□□ -1.99
CDH12P55289 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.6□□□□□ -1.99
CDH12P55289 AC009487.2-201ENST00000420969 6821 ntBASIC2.6□□□□□ -1.99
CDH12P55289 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.6□□□□□ -1.99
CDH12P55289 AC002543.1-201ENST00000299783 1954 ntBASIC2.6□□□□□ -1.99
CDH12P55289 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.59□□□□□ -1.99
CDH12P55289 MTND4P1-201ENST00000457501 1466 ntBASIC2.59□□□□□ -1.99
CDH12P55289 AC000403.1-201ENST00000613696 3585 ntBASIC2.59□□□□□ -1.99
CDH12P55289 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
CDH12P55289 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CDH12P55289 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CDH12P55289 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
CDH12P55289 RNU5B-2P-201ENST00000363036 113 ntBASIC2.59□□□□□ -1.99
CDH12P55289 RNY3P11-201ENST00000364153 102 ntBASIC2.59□□□□□ -1.99
CDH12P55289 RNU6-1032P-201ENST00000384100 107 ntBASIC2.59□□□□□ -1.99
CDH12P55289 RNU6-851P-201ENST00000384565 107 ntBASIC2.59□□□□□ -1.99
CDH12P55289 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CDH12P55289 U3.26-201ENST00000391236 204 ntBASIC2.59□□□□□ -1.99
CDH12P55289 AC078809.1-201ENST00000427601 140 ntBASIC2.59□□□□□ -1.99
CDH12P55289 Z98742.2-201ENST00000431564 187 ntBASIC2.59□□□□□ -1.99
CDH12P55289 AC099799.1-201ENST00000439809 192 ntBASIC2.59□□□□□ -1.99
CDH12P55289 GPM6BP3-201ENST00000442797 145 ntBASIC2.59□□□□□ -1.99
CDH12P55289 RPL39P40-201ENST00000445481 146 ntBASIC2.59□□□□□ -1.99
CDH12P55289 AL353705.4-201ENST00000449661 238 ntBASIC2.59□□□□□ -1.99
CDH12P55289 CHEK2P4-201ENST00000450340 246 ntBASIC2.59□□□□□ -1.99
CDH12P55289 AC016632.1-201ENST00000503994 196 ntBASIC2.59□□□□□ -1.99
CDH12P55289 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH12P55289 SNORA25.11-201ENST00000515935 105 ntBASIC2.59□□□□□ -1.99
CDH12P55289 SNORA31.16-201ENST00000516773 139 ntBASIC2.59□□□□□ -1.99
CDH12P55289 AC007375.1-201ENST00000554513 578 ntBASIC2.59□□□□□ -1.99
CDH12P55289 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.59□□□□□ -1.99
CDH12P55289 AC105137.2-201ENST00000569073 466 ntBASIC2.59□□□□□ -1.99
CDH12P55289 MIR5571-201ENST00000577998 113 ntBASIC2.59□□□□□ -1.99
CDH12P55289 ZNF861P-201ENST00000588126 639 ntBASIC2.59□□□□□ -1.99
CDH12P55289 AC092447.9-201ENST00000603395 144 ntBASIC2.59□□□□□ -1.99
CDH12P55289 AL078605.1-201ENST00000603529 500 ntBASIC2.59□□□□□ -1.99
CDH12P55289 AC096772.1-201ENST00000609146 564 ntBASIC2.59□□□□□ -1.99
CDH12P55289 AL359198.2-201ENST00000611836 194 ntBASIC2.59□□□□□ -1.99
CDH12P55289 AC083806.3-201ENST00000614016 455 ntBASIC2.59□□□□□ -1.99
CDH12P55289 AC007792.1-201ENST00000623023 402 ntBASIC2.59□□□□□ -1.99
CDH12P55289 SCARNA4-201ENST00000629045 128 ntBASIC2.59□□□□□ -1.99
CDH12P55289 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.59□□□□□ -1.99
CDH12P55289 AC096644.4-201ENST00000563417 2912 ntBASIC2.58□□□□□ -2
CDH12P55289 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.58□□□□□ -2
CDH12P55289 MIR26A1-201ENST00000362205 77 ntBASIC2.58□□□□□ -2
CDH12P55289 RNU6-212P-201ENST00000362642 104 ntBASIC2.58□□□□□ -2
CDH12P55289 SNORD114-19-201ENST00000363072 75 ntBASIC2.58□□□□□ -2
CDH12P55289 Y_RNA.314-201ENST00000365114 102 ntBASIC2.58□□□□□ -2
CDH12P55289 RNU1-115P-201ENST00000365329 160 ntBASIC2.58□□□□□ -2
CDH12P55289 Y_RNA.405-201ENST00000383979 100 ntBASIC2.58□□□□□ -2
CDH12P55289 Y_RNA.451-201ENST00000384200 100 ntBASIC2.58□□□□□ -2
CDH12P55289 Y_RNA.524-201ENST00000384564 100 ntBASIC2.58□□□□□ -2
CDH12P55289 Y_RNA.561-201ENST00000384694 100 ntBASIC2.58□□□□□ -2
CDH12P55289 MIR23B-201ENST00000384832 97 ntBASIC2.58□□□□□ -2
CDH12P55289 SNORA12.2-201ENST00000391040 156 ntBASIC2.58□□□□□ -2
CDH12P55289 SNORA26.3-201ENST00000391119 136 ntBASIC2.58□□□□□ -2
CDH12P55289 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.58□□□□□ -2
CDH12P55289 RNA5SP492-201ENST00000411330 114 ntBASIC2.58□□□□□ -2
CDH12P55289 CYCSP48-201ENST00000417124 323 ntBASIC2.58□□□□□ -2
CDH12P55289 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.58□□□□□ -2
CDH12P55289 AC092423.1-201ENST00000430165 186 ntBASIC2.58□□□□□ -2
CDH12P55289 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.58□□□□□ -2
CDH12P55289 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.58□□□□□ -2
CDH12P55289 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.58□□□□□ -2
CDH12P55289 RN7SKP210-201ENST00000459176 261 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms