Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 CYCSP33-201ENST00000414485 327 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 VN1R36P-201ENST00000414936 291 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.28□□□□□ -2.04
LIMK2P53671 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.28□□□□□ -2.04
LIMK2P53671 RPL30P4-201ENST00000429309 333 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 RPS3AP52-201ENST00000435639 297 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.28□□□□□ -2.04
LIMK2P53671 AC018634.1-201ENST00000437554 401 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.28□□□□□ -2.04
LIMK2P53671 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.28□□□□□ -2.04
LIMK2P53671 snoU109.2-201ENST00000459316 135 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 snoU13.15-201ENST00000459407 104 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 UBL5P3-201ENST00000475112 231 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 RPL36AP48-201ENST00000485521 314 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 AC011005.2-201ENST00000487324 359 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 AC018437.1-201ENST00000492214 406 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.28□□□□□ -2.04
LIMK2P53671 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.28□□□□□ -2.04
LIMK2P53671 MIR892C-201ENST00000516410 77 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 Y_RNA.682-201ENST00000516457 100 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 RNA5SP82-201ENST00000516707 92 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 RNU6-566P-201ENST00000516790 107 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.28□□□□□ -2.04
LIMK2P53671 COPS8P3-201ENST00000526024 482 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 CYCSP27-201ENST00000527643 293 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.28□□□□□ -2.04
LIMK2P53671 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.28□□□□□ -2.04
LIMK2P53671 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.28□□□□□ -2.04
LIMK2P53671 MIR1273D-201ENST00000577266 86 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 LRRC37A5P-203ENST00000580181 585 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.28□□□□□ -2.04
LIMK2P53671 MIR4658-201ENST00000584344 65 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 POLR3GP2-201ENST00000588366 668 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 AC023043.2-201ENST00000589678 1026 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 AC044792.1-201ENST00000593294 196 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 AC113139.1-201ENST00000605049 239 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 AC002044.1-201ENST00000606707 158 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 AC069294.1-201ENST00000608397 350 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 AL138726.1-201ENST00000614873 333 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 AL359757.2-201ENST00000624309 274 ntBASIC2.28□□□□□ -2.04
LIMK2P53671 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.28□□□□□ -2.04
LIMK2P53671 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
LIMK2P53671 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LIMK2P53671 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
LIMK2P53671 MIRLET7G-201ENST00000362280 84 ntBASIC2.27□□□□□ -2.05
LIMK2P53671 RNU6-858P-201ENST00000362436 107 ntBASIC2.27□□□□□ -2.05
LIMK2P53671 RNU6-942P-201ENST00000363002 107 ntBASIC2.27□□□□□ -2.05
LIMK2P53671 RNU6-266P-201ENST00000364225 107 ntBASIC2.27□□□□□ -2.05
LIMK2P53671 MIR548F5-201ENST00000408421 86 ntBASIC2.27□□□□□ -2.05
LIMK2P53671 AC097463.2-201ENST00000421074 142 ntBASIC2.27□□□□□ -2.05
LIMK2P53671 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.27□□□□□ -2.05
LIMK2P53671 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.27□□□□□ -2.05
LIMK2P53671 RNU7-26P-201ENST00000458980 63 ntBASIC2.27□□□□□ -2.05
LIMK2P53671 MED28P2-201ENST00000475771 317 ntBASIC2.27□□□□□ -2.05
LIMK2P53671 RNU1-86P-201ENST00000516108 154 ntBASIC2.27□□□□□ -2.05
LIMK2P53671 RNU1-107P-201ENST00000516617 154 ntBASIC2.27□□□□□ -2.05
LIMK2P53671 RNA5SP454-201ENST00000517231 127 ntBASIC2.27□□□□□ -2.05
LIMK2P53671 IGKV3-31-201ENST00000523109 329 ntBASIC2.27□□□□□ -2.05
LIMK2P53671 AC079598.5-201ENST00000547460 117 ntBASIC2.27□□□□□ -2.05
LIMK2P53671 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.27□□□□□ -2.05
LIMK2P53671 MIR5571-201ENST00000577998 113 ntBASIC2.27□□□□□ -2.05
LIMK2P53671 AC105245.1-201ENST00000581934 244 ntBASIC2.27□□□□□ -2.05
LIMK2P53671 AL031601.2-202ENST00000622650 282 ntBASIC2.27□□□□□ -2.05
LIMK2P53671 MIR3529-201ENST00000637713 78 ntBASIC2.27□□□□□ -2.05
LIMK2P53671 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.26□□□□□ -2.05
LIMK2P53671 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
LIMK2P53671 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
LIMK2P53671 Z75746.1-201ENST00000440243 2080 ntBASIC2.26□□□□□ -2.05
LIMK2P53671 RNU1-91P-201ENST00000364746 163 ntBASIC2.26□□□□□ -2.05
LIMK2P53671 SNORA67.1-201ENST00000364749 141 ntBASIC2.26□□□□□ -2.05
LIMK2P53671 SNORD116-11-201ENST00000383882 92 ntBASIC2.26□□□□□ -2.05
LIMK2P53671 Y_RNA.387-201ENST00000383918 102 ntBASIC2.26□□□□□ -2.05
LIMK2P53671 Y_RNA.480-201ENST00000384364 102 ntBASIC2.26□□□□□ -2.05
LIMK2P53671 RN7SKP158-201ENST00000410453 326 ntBASIC2.26□□□□□ -2.05
LIMK2P53671 RNU4-14P-201ENST00000410858 122 ntBASIC2.26□□□□□ -2.05
LIMK2P53671 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.26□□□□□ -2.05
LIMK2P53671 TOMM20P4-201ENST00000427861 435 ntBASIC2.26□□□□□ -2.05
LIMK2P53671 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.26□□□□□ -2.05
LIMK2P53671 MTND1P17-201ENST00000448961 204 ntBASIC2.26□□□□□ -2.05
LIMK2P53671 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.26□□□□□ -2.05
LIMK2P53671 AC006026.2-201ENST00000457376 180 ntBASIC2.26□□□□□ -2.05
LIMK2P53671 Y_RNA.632-201ENST00000459189 102 ntBASIC2.26□□□□□ -2.05
LIMK2P53671 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.26□□□□□ -2.05
LIMK2P53671 AC104435.1-201ENST00000483483 166 ntBASIC2.26□□□□□ -2.05
LIMK2P53671 MTND5P5-201ENST00000503764 376 ntBASIC2.26□□□□□ -2.05
LIMK2P53671 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.26□□□□□ -2.05
LIMK2P53671 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.26□□□□□ -2.05
LIMK2P53671 RNU6-323P-201ENST00000521915 107 ntBASIC2.26□□□□□ -2.05
LIMK2P53671 AP005639.2-201ENST00000527592 928 ntBASIC2.26□□□□□ -2.05
LIMK2P53671 CR383656.8-201ENST00000549046 145 ntBASIC2.26□□□□□ -2.05
LIMK2P53671 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.26□□□□□ -2.05
LIMK2P53671 AC016727.1-205ENST00000605437 569 ntBASIC2.26□□□□□ -2.05
LIMK2P53671 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.26□□□□□ -2.05
LIMK2P53671 MIR6895-201ENST00000613497 78 ntBASIC2.26□□□□□ -2.05
LIMK2P53671 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LIMK2P53671 AC090574.1-201ENST00000623186 233 ntBASIC2.26□□□□□ -2.05
LIMK2P53671 AC099654.10-201ENST00000640395 161 ntBASIC2.26□□□□□ -2.05
LIMK2P53671 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LIMK2P53671 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.26□□□□□ -2.05
LIMK2P53671 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms