Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RNY4P14-201ENST00000363656 96 ntBASIC2.33□□□□□ -2.04
LIMK1P53667 RNU6-214P-201ENST00000384130 107 ntBASIC2.33□□□□□ -2.04
LIMK1P53667 SNORA64-201ENST00000384674 134 ntBASIC2.33□□□□□ -2.04
LIMK1P53667 SNORA80E-201ENST00000384744 137 ntBASIC2.33□□□□□ -2.04
LIMK1P53667 SNORD115-47-201ENST00000391226 86 ntBASIC2.33□□□□□ -2.04
LIMK1P53667 AL117339.3-201ENST00000418733 162 ntBASIC2.33□□□□□ -2.04
LIMK1P53667 AL590556.1-201ENST00000423231 483 ntBASIC2.33□□□□□ -2.04
LIMK1P53667 AC007677.1-201ENST00000445757 515 ntBASIC2.33□□□□□ -2.04
LIMK1P53667 AC107032.1-201ENST00000485945 480 ntBASIC2.33□□□□□ -2.04
LIMK1P53667 RPL30P1-201ENST00000488676 339 ntBASIC2.33□□□□□ -2.04
LIMK1P53667 RNU6-1069P-201ENST00000516612 133 ntBASIC2.33□□□□□ -2.04
LIMK1P53667 COPS8P3-201ENST00000526024 482 ntBASIC2.33□□□□□ -2.04
LIMK1P53667 AC115990.1-201ENST00000526957 301 ntBASIC2.33□□□□□ -2.04
LIMK1P53667 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.33□□□□□ -2.04
LIMK1P53667 AC091135.1-201ENST00000585943 307 ntBASIC2.33□□□□□ -2.04
LIMK1P53667 SDR42E1P4-201ENST00000620894 481 ntBASIC2.33□□□□□ -2.04
LIMK1P53667 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.33□□□□□ -2.04
LIMK1P53667 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.33□□□□□ -2.04
LIMK1P53667 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
LIMK1P53667 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
LIMK1P53667 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.33□□□□□ -2.04
LIMK1P53667 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
LIMK1P53667 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LIMK1P53667 RNU1-72P-201ENST00000362976 153 ntBASIC2.32□□□□□ -2.04
LIMK1P53667 RNY3P3-201ENST00000363816 102 ntBASIC2.32□□□□□ -2.04
LIMK1P53667 SNORA16B-201ENST00000364674 135 ntBASIC2.32□□□□□ -2.04
LIMK1P53667 Y_RNA.450-201ENST00000384198 113 ntBASIC2.32□□□□□ -2.04
LIMK1P53667 MIR561-201ENST00000385216 97 ntBASIC2.32□□□□□ -2.04
LIMK1P53667 RNU6-332P-201ENST00000391193 108 ntBASIC2.32□□□□□ -2.04
LIMK1P53667 CBX3P9-201ENST00000402326 552 ntBASIC2.32□□□□□ -2.04
LIMK1P53667 Y_RNA.595-201ENST00000410403 105 ntBASIC2.32□□□□□ -2.04
LIMK1P53667 Y_RNA.615-201ENST00000410769 117 ntBASIC2.32□□□□□ -2.04
LIMK1P53667 EDDM3CP-201ENST00000415977 425 ntBASIC2.32□□□□□ -2.04
LIMK1P53667 MRPS10P2-201ENST00000431226 381 ntBASIC2.32□□□□□ -2.04
LIMK1P53667 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.32□□□□□ -2.04
LIMK1P53667 AC013470.1-201ENST00000453438 462 ntBASIC2.32□□□□□ -2.04
LIMK1P53667 RNA5SP233-201ENST00000459153 113 ntBASIC2.32□□□□□ -2.04
LIMK1P53667 RNU6-1037P-201ENST00000459571 107 ntBASIC2.32□□□□□ -2.04
LIMK1P53667 AC092989.1-201ENST00000481235 277 ntBASIC2.32□□□□□ -2.04
LIMK1P53667 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.32□□□□□ -2.04
LIMK1P53667 MIR514B-201ENST00000516774 80 ntBASIC2.32□□□□□ -2.04
LIMK1P53667 AC104576.1-201ENST00000524225 88 ntBASIC2.32□□□□□ -2.04
LIMK1P53667 AC007375.1-201ENST00000554513 578 ntBASIC2.32□□□□□ -2.04
LIMK1P53667 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.32□□□□□ -2.04
LIMK1P53667 MIR5692C1-201ENST00000585309 91 ntBASIC2.32□□□□□ -2.04
LIMK1P53667 AC098679.4-201ENST00000624241 654 ntBASIC2.32□□□□□ -2.04
LIMK1P53667 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
LIMK1P53667 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.31□□□□□ -2.04
LIMK1P53667 Y_RNA.140-201ENST00000363474 103 ntBASIC2.31□□□□□ -2.04
LIMK1P53667 MIR514A2-201ENST00000385131 88 ntBASIC2.31□□□□□ -2.04
LIMK1P53667 MIR514A3-201ENST00000385132 88 ntBASIC2.31□□□□□ -2.04
LIMK1P53667 MIR450B-201ENST00000401182 78 ntBASIC2.31□□□□□ -2.04
LIMK1P53667 RPS29P13-201ENST00000402041 169 ntBASIC2.31□□□□□ -2.04
LIMK1P53667 AL356379.1-201ENST00000414105 126 ntBASIC2.31□□□□□ -2.04
LIMK1P53667 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.31□□□□□ -2.04
LIMK1P53667 MTCO2P3-201ENST00000442543 421 ntBASIC2.31□□□□□ -2.04
LIMK1P53667 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.31□□□□□ -2.04
LIMK1P53667 AC008628.2-201ENST00000502605 298 ntBASIC2.31□□□□□ -2.04
LIMK1P53667 RNU6-1332P-201ENST00000516666 104 ntBASIC2.31□□□□□ -2.04
LIMK1P53667 RNU6-295P-201ENST00000516901 104 ntBASIC2.31□□□□□ -2.04
LIMK1P53667 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.31□□□□□ -2.04
LIMK1P53667 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.31□□□□□ -2.04
LIMK1P53667 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.31□□□□□ -2.04
LIMK1P53667 HSPE1P4-201ENST00000550617 308 ntBASIC2.31□□□□□ -2.04
LIMK1P53667 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.31□□□□□ -2.04
LIMK1P53667 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.31□□□□□ -2.04
LIMK1P53667 MIR219B-201ENST00000637023 88 ntBASIC2.31□□□□□ -2.04
LIMK1P53667 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LIMK1P53667 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LIMK1P53667 RNU6-451P-201ENST00000362921 107 ntBASIC2.3□□□□□ -2.04
LIMK1P53667 Y_RNA.295-201ENST00000364918 102 ntBASIC2.3□□□□□ -2.04
LIMK1P53667 RNU6-43P-201ENST00000384302 107 ntBASIC2.3□□□□□ -2.04
LIMK1P53667 MIR548F1-201ENST00000408667 84 ntBASIC2.3□□□□□ -2.04
LIMK1P53667 snoU13.14-201ENST00000459372 104 ntBASIC2.3□□□□□ -2.04
LIMK1P53667 AC082651.2-201ENST00000496833 166 ntBASIC2.3□□□□□ -2.04
LIMK1P53667 AC026436.1-201ENST00000510537 270 ntBASIC2.3□□□□□ -2.04
LIMK1P53667 RNU6-718P-201ENST00000516166 105 ntBASIC2.3□□□□□ -2.04
LIMK1P53667 RNA5SP137-201ENST00000516833 135 ntBASIC2.3□□□□□ -2.04
LIMK1P53667 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.3□□□□□ -2.04
LIMK1P53667 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.3□□□□□ -2.04
LIMK1P53667 IMMP1LP2-201ENST00000552954 492 ntBASIC2.3□□□□□ -2.04
LIMK1P53667 MIR4287-201ENST00000579398 78 ntBASIC2.3□□□□□ -2.04
LIMK1P53667 MIR5007-201ENST00000583098 95 ntBASIC2.3□□□□□ -2.04
LIMK1P53667 VN1R107P-201ENST00000601784 209 ntBASIC2.3□□□□□ -2.04
LIMK1P53667 AC009318.2-201ENST00000610917 651 ntBASIC2.3□□□□□ -2.04
LIMK1P53667 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.3□□□□□ -2.04
LIMK1P53667 AC090517.2-201ENST00000614966 680 ntBASIC2.3□□□□□ -2.04
LIMK1P53667 AC063943.3-201ENST00000615562 356 ntBASIC2.3□□□□□ -2.04
LIMK1P53667 AC024614.3-201ENST00000637860 256 ntBASIC2.3□□□□□ -2.04
LIMK1P53667 AC008555.8-201ENST00000623602 2168 ntBASIC2.3□□□□□ -2.04
LIMK1P53667 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
LIMK1P53667 RNU6-1141P-201ENST00000364520 107 ntBASIC2.29□□□□□ -2.04
LIMK1P53667 U8.13-201ENST00000390842 128 ntBASIC2.29□□□□□ -2.04
LIMK1P53667 RNU6-373P-201ENST00000411247 98 ntBASIC2.29□□□□□ -2.04
LIMK1P53667 MTND1P23-201ENST00000416931 372 ntBASIC2.29□□□□□ -2.04
LIMK1P53667 AC244670.1-201ENST00000436879 112 ntBASIC2.29□□□□□ -2.04
LIMK1P53667 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.29□□□□□ -2.04
LIMK1P53667 AL359672.1-201ENST00000442302 409 ntBASIC2.29□□□□□ -2.04
LIMK1P53667 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.29□□□□□ -2.04
LIMK1P53667 RNU5F-2P-201ENST00000516066 82 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms