Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 MTCO3P9-201ENST00000506989 781 ntBASIC0.2□□□□□ -2.38
POLR2JP52435 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.2□□□□□ -2.38
POLR2JP52435 AC112206.3-201ENST00000514578 389 ntBASIC0.2□□□□□ -2.38
POLR2JP52435 RNU6-677P-201ENST00000516914 101 ntBASIC0.2□□□□□ -2.38
POLR2JP52435 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.2□□□□□ -2.38
POLR2JP52435 APOOP3-201ENST00000536787 586 ntBASIC0.2□□□□□ -2.38
POLR2JP52435 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.2□□□□□ -2.38
POLR2JP52435 AL137100.2-201ENST00000555786 315 ntBASIC0.2□□□□□ -2.38
POLR2JP52435 AC004987.4-201ENST00000603383 338 ntBASIC0.2□□□□□ -2.38
POLR2JP52435 CTHRC1P1-201ENST00000605383 469 ntBASIC0.2□□□□□ -2.38
POLR2JP52435 AC008147.4-201ENST00000617570 1204 ntBASIC0.2□□□□□ -2.38
POLR2JP52435 AL138955.1-201ENST00000622881 1040 ntBASIC0.2□□□□□ -2.38
POLR2JP52435 AC024940.5-201ENST00000622889 474 ntBASIC0.2□□□□□ -2.38
POLR2JP52435 AC104985.3-201ENST00000623479 597 ntBASIC0.2□□□□□ -2.38
POLR2JP52435 MIR6516-201ENST00000630554 81 ntBASIC0.2□□□□□ -2.38
POLR2JP52435 Y_RNA.4-201ENST00000362333 112 ntBASIC0.19□□□□□ -2.38
POLR2JP52435 RNU6-1285P-201ENST00000363480 105 ntBASIC0.19□□□□□ -2.38
POLR2JP52435 RNU6-468P-201ENST00000384003 109 ntBASIC0.19□□□□□ -2.38
POLR2JP52435 SNORA80D-201ENST00000384488 135 ntBASIC0.19□□□□□ -2.38
POLR2JP52435 RPS3AP36-201ENST00000398190 775 ntBASIC0.19□□□□□ -2.38
POLR2JP52435 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.19□□□□□ -2.38
POLR2JP52435 MTCO2P1-201ENST00000424648 477 ntBASIC0.19□□□□□ -2.38
POLR2JP52435 MTCO1P27-201ENST00000448269 226 ntBASIC0.19□□□□□ -2.38
POLR2JP52435 Y_RNA.638-201ENST00000459374 113 ntBASIC0.19□□□□□ -2.38
POLR2JP52435 AC113410.1-201ENST00000505029 247 ntBASIC0.19□□□□□ -2.38
POLR2JP52435 RNA5SP134-201ENST00000516492 96 ntBASIC0.19□□□□□ -2.38
POLR2JP52435 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.19□□□□□ -2.38
POLR2JP52435 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.19□□□□□ -2.38
POLR2JP52435 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.19□□□□□ -2.38
POLR2JP52435 AL132657.2-201ENST00000564417 358 ntBASIC0.19□□□□□ -2.38
POLR2JP52435 TPRKBP2-201ENST00000565969 475 ntBASIC0.19□□□□□ -2.38
POLR2JP52435 MIR4711-201ENST00000578274 70 ntBASIC0.19□□□□□ -2.38
POLR2JP52435 KC877982.1-201ENST00000602313 470 ntBASIC0.19□□□□□ -2.38
POLR2JP52435 AL034555.1-201ENST00000604816 211 ntBASIC0.19□□□□□ -2.38
POLR2JP52435 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.19□□□□□ -2.38
POLR2JP52435 AC131159.1-201ENST00000621854 213 ntBASIC0.19□□□□□ -2.38
POLR2JP52435 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
POLR2JP52435 MTND4P14-201ENST00000435799 1354 ntBASIC0.19□□□□□ -2.38
POLR2JP52435 RNU6-384P-201ENST00000364900 104 ntBASIC0.18□□□□□ -2.38
POLR2JP52435 MIR499A-201ENST00000384903 122 ntBASIC0.18□□□□□ -2.38
POLR2JP52435 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.18□□□□□ -2.38
POLR2JP52435 AC092423.1-201ENST00000430165 186 ntBASIC0.18□□□□□ -2.38
POLR2JP52435 PAXBP1P1-201ENST00000449315 447 ntBASIC0.18□□□□□ -2.38
POLR2JP52435 AC016925.1-201ENST00000458303 298 ntBASIC0.18□□□□□ -2.38
POLR2JP52435 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.18□□□□□ -2.38
POLR2JP52435 AC105758.1-201ENST00000506038 399 ntBASIC0.18□□□□□ -2.38
POLR2JP52435 AC011979.2-201ENST00000527568 352 ntBASIC0.18□□□□□ -2.38
POLR2JP52435 AC090888.2-201ENST00000559765 1144 ntBASIC0.18□□□□□ -2.38
POLR2JP52435 VN1R87P-201ENST00000596706 487 ntBASIC0.18□□□□□ -2.38
POLR2JP52435 AL353778.1-201ENST00000603149 408 ntBASIC0.18□□□□□ -2.38
POLR2JP52435 AL031281.1-201ENST00000604049 488 ntBASIC0.18□□□□□ -2.38
POLR2JP52435 AC006270.3-201ENST00000605967 1036 ntBASIC0.18□□□□□ -2.38
POLR2JP52435 RMST_7.1-201ENST00000621935 268 ntBASIC0.18□□□□□ -2.38
POLR2JP52435 SNORD3E-202ENST00000627253 216 ntBASIC0.18□□□□□ -2.38
POLR2JP52435 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
POLR2JP52435 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
POLR2JP52435 RNU6-236P-201ENST00000363886 106 ntBASIC0.17□□□□□ -2.38
POLR2JP52435 snoZ40.1-201ENST00000364540 72 ntBASIC0.17□□□□□ -2.38
POLR2JP52435 RNU6-1237P-201ENST00000384777 107 ntBASIC0.17□□□□□ -2.38
POLR2JP52435 RPL21P1-201ENST00000399532 476 ntBASIC0.17□□□□□ -2.38
POLR2JP52435 RNA5SP247-201ENST00000411181 105 ntBASIC0.17□□□□□ -2.38
POLR2JP52435 AC060773.1-201ENST00000421698 310 ntBASIC0.17□□□□□ -2.38
POLR2JP52435 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.17□□□□□ -2.38
POLR2JP52435 AC010587.2-201ENST00000511727 448 ntBASIC0.17□□□□□ -2.38
POLR2JP52435 RNU6-922P-201ENST00000516753 99 ntBASIC0.17□□□□□ -2.38
POLR2JP52435 OR8K2P-201ENST00000524645 927 ntBASIC0.17□□□□□ -2.38
POLR2JP52435 AP001893.2-201ENST00000526949 202 ntBASIC0.17□□□□□ -2.38
POLR2JP52435 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.17□□□□□ -2.38
POLR2JP52435 AC023050.2-201ENST00000544968 387 ntBASIC0.17□□□□□ -2.38
POLR2JP52435 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.17□□□□□ -2.38
POLR2JP52435 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.17□□□□□ -2.38
POLR2JP52435 AL513534.2-201ENST00000603836 250 ntBASIC0.17□□□□□ -2.38
POLR2JP52435 AL353149.1-201ENST00000610667 244 ntBASIC0.17□□□□□ -2.38
POLR2JP52435 AC009509.4-201ENST00000619202 509 ntBASIC0.17□□□□□ -2.38
POLR2JP52435 SNORD31B-201ENST00000364977 69 ntBASIC0.16□□□□□ -2.38
POLR2JP52435 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
POLR2JP52435 MIR936-201ENST00000401264 98 ntBASIC0.16□□□□□ -2.38
POLR2JP52435 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.16□□□□□ -2.38
POLR2JP52435 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.16□□□□□ -2.38
POLR2JP52435 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.16□□□□□ -2.38
POLR2JP52435 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.16□□□□□ -2.38
POLR2JP52435 GAPDHP17-201ENST00000449858 1001 ntBASIC0.16□□□□□ -2.38
POLR2JP52435 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.16□□□□□ -2.38
POLR2JP52435 AC006026.2-201ENST00000457376 180 ntBASIC0.16□□□□□ -2.38
POLR2JP52435 AC104982.1-201ENST00000478775 574 ntBASIC0.16□□□□□ -2.38
POLR2JP52435 MTND3P5-201ENST00000512798 333 ntBASIC0.16□□□□□ -2.38
POLR2JP52435 SNORA68.3-201ENST00000515906 83 ntBASIC0.16□□□□□ -2.38
POLR2JP52435 DEFB130C-202ENST00000530001 230 ntBASIC0.16□□□□□ -2.38
POLR2JP52435 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.16□□□□□ -2.38
POLR2JP52435 AC021231.3-201ENST00000558497 370 ntBASIC0.16□□□□□ -2.38
POLR2JP52435 AC110760.3-201ENST00000598794 467 ntBASIC0.16□□□□□ -2.38
POLR2JP52435 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.16□□□□□ -2.38
POLR2JP52435 AC017083.3-201ENST00000609955 700 ntBASIC0.16□□□□□ -2.38
POLR2JP52435 AC078880.5-201ENST00000617845 421 ntBASIC0.16□□□□□ -2.38
POLR2JP52435 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
POLR2JP52435 AL589743.1-201ENST00000551932 2712 ntBASIC0.16□□□□□ -2.38
POLR2JP52435 SNORA33-201ENST00000363664 130 ntBASIC0.15□□□□□ -2.39
POLR2JP52435 RNU6-505P-201ENST00000384427 107 ntBASIC0.15□□□□□ -2.39
POLR2JP52435 MIR544A-201ENST00000384855 91 ntBASIC0.15□□□□□ -2.39
POLR2JP52435 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms